RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 MYBBP1AQ9BQG0 1328 aaKnown RBP17.65■□□□□ 0.42
KRT40-201ENST00000377755 TTC21BQ7Z4L5 1316 aa17.64■□□□□ 0.41
KRT40-201ENST00000377755 SSH2Q76I76 1423 aa17.64■□□□□ 0.41
KRT40-201ENST00000377755 NSD2O96028 1365 aa17.63■□□□□ 0.41
KRT40-201ENST00000377755 MORC1Q86VD1 984 aa17.63■□□□□ 0.41
KRT40-201ENST00000377755 NME9Q86XW9 330 aa17.63■□□□□ 0.41
KRT40-201ENST00000377755 FOXO3O43524 673 aa17.63■□□□□ 0.41
KRT40-201ENST00000377755 ZRANB1Q9UGI0 708 aa17.63■□□□□ 0.41
KRT40-201ENST00000377755 NRKQ7Z2Y5 1582 aa17.62■□□□□ 0.41
KRT40-201ENST00000377755 PPP2R1AP30153 589 aa17.61■□□□□ 0.41
KRT40-201ENST00000377755 TNNT2P45379 298 aaPredicted RBP17.61■□□□□ 0.41
KRT40-201ENST00000377755 SLAIN2Q9P270 581 aa17.61■□□□□ 0.41
KRT40-201ENST00000377755 PSME1Q06323 249 aa17.61■□□□□ 0.41
KRT40-201ENST00000377755 KIF20BQ96Q89 1820 aa17.6■□□□□ 0.41
KRT40-201ENST00000377755 MRS2Q9HD23 443 aa17.6■□□□□ 0.41
KRT40-201ENST00000377755 NLRP13Q86W25 1043 aa17.59■□□□□ 0.41
KRT40-201ENST00000377755 XPCQ01831 940 aaPredicted RBP17.58■□□□□ 0.41
KRT40-201ENST00000377755 TTC21AQ8NDW8 1320 aa17.58■□□□□ 0.4
KRT40-201ENST00000377755 BRINP3Q76B58 766 aa17.58■□□□□ 0.4
KRT40-201ENST00000377755 DDX17Q92841 729 aaKnown RBP17.58■□□□□ 0.4
KRT40-201ENST00000377755 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
KRT40-201ENST00000377755 KIF1AQ12756 1690 aa17.57■□□□□ 0.4
KRT40-201ENST00000377755 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
KRT40-201ENST00000377755 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
KRT40-201ENST00000377755 FBLN1P23142 703 aa17.56■□□□□ 0.4
KRT40-201ENST00000377755 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
KRT40-201ENST00000377755 COG3Q96JB2 828 aa17.56■□□□□ 0.4
KRT40-201ENST00000377755 ABTB2Q8N961 1025 aa17.54■□□□□ 0.4
KRT40-201ENST00000377755 NUTM2GQ5VZR2 741 aa17.54■□□□□ 0.4
KRT40-201ENST00000377755 PIK3C2AO00443 1686 aa17.53■□□□□ 0.4
KRT40-201ENST00000377755 OVOS2A0A0J9YW53 1432 aa17.53■□□□□ 0.4
KRT40-201ENST00000377755 OVOS2Q6IE36 1432 aa17.53■□□□□ 0.4
KRT40-201ENST00000377755 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
KRT40-201ENST00000377755 USP31Q70CQ4 1352 aa17.52■□□□□ 0.4
KRT40-201ENST00000377755 MTHFSP49914 203 aa17.52■□□□□ 0.4
KRT40-201ENST00000377755 NLRP6P59044 892 aa17.52■□□□□ 0.4
KRT40-201ENST00000377755 NPHP3Q7Z494 1330 aa17.52■□□□□ 0.4
KRT40-201ENST00000377755 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
KRT40-201ENST00000377755 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
KRT40-201ENST00000377755 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
KRT40-201ENST00000377755 YTHDC1Q96MU7 727 aaKnown RBP17.49■□□□□ 0.39
KRT40-201ENST00000377755 LMOD2Q6P5Q4 547 aa17.49■□□□□ 0.39
KRT40-201ENST00000377755 POLKQ9UBT6 870 aa17.49■□□□□ 0.39
KRT40-201ENST00000377755 PXDNQ92626 1479 aa17.48■□□□□ 0.39
KRT40-201ENST00000377755 SOX12O15370 315 aa17.48■□□□□ 0.39
KRT40-201ENST00000377755 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
KRT40-201ENST00000377755 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
KRT40-201ENST00000377755 MARF1Q9Y4F3 1742 aaKnown RBP17.47■□□□□ 0.39
KRT40-201ENST00000377755 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
KRT40-201ENST00000377755 SBNO1A3KN83 1393 aa17.47■□□□□ 0.39
KRT40-201ENST00000377755 SOS2Q07890 1332 aaPredicted RBP17.46■□□□□ 0.39
KRT40-201ENST00000377755 MAP2P11137 1827 aaKnown RBP17.45■□□□□ 0.38
KRT40-201ENST00000377755 PPM1GO15355 546 aaPredicted RBP17.44■□□□□ 0.38
KRT40-201ENST00000377755 TOM1O60784 492 aa17.44■□□□□ 0.38
KRT40-201ENST00000377755 USP54Q70EL1 1684 aa17.44■□□□□ 0.38
KRT40-201ENST00000377755 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
KRT40-201ENST00000377755 PLEKHG5O94827 1062 aa17.44■□□□□ 0.38
KRT40-201ENST00000377755 CERKQ8TCT0 537 aa17.44■□□□□ 0.38
KRT40-201ENST00000377755 ALS2Q96Q42 1657 aa17.44■□□□□ 0.38
KRT40-201ENST00000377755 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
KRT40-201ENST00000377755 TNS3Q68CZ2 1445 aa17.43■□□□□ 0.38
KRT40-201ENST00000377755 NHSL1Q5SYE7 1610 aa17.43■□□□□ 0.38
KRT40-201ENST00000377755 CFAP53Q96M91 514 aa17.42■□□□□ 0.38
KRT40-201ENST00000377755 UBAP1LF5GYI3 381 aa17.42■□□□□ 0.38
KRT40-201ENST00000377755 PIP4K2BP78356 416 aa17.42■□□□□ 0.38
KRT40-201ENST00000377755 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
KRT40-201ENST00000377755 PNPLA6Q8IY17 1366 aa17.41■□□□□ 0.38
KRT40-201ENST00000377755 MAP3K19Q56UN5 1328 aa17.41■□□□□ 0.38
KRT40-201ENST00000377755 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
KRT40-201ENST00000377755 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
KRT40-201ENST00000377755 USP19O94966 1318 aa17.4■□□□□ 0.38
KRT40-201ENST00000377755 GCP02774 474 aa17.4■□□□□ 0.38
KRT40-201ENST00000377755 COL3A1P02461 1466 aaPredicted RBP17.39■□□□□ 0.37
KRT40-201ENST00000377755 KCNH5Q8NCM2 988 aa17.39■□□□□ 0.37
KRT40-201ENST00000377755 INSRP06213 1382 aa17.39■□□□□ 0.37
KRT40-201ENST00000377755 SLIT3O75094 1523 aa17.38■□□□□ 0.37
KRT40-201ENST00000377755 ADRA2BP18089 450 aa17.38■□□□□ 0.37
KRT40-201ENST00000377755 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
KRT40-201ENST00000377755 CABLES1Q8TDN4 633 aa17.38■□□□□ 0.37
KRT40-201ENST00000377755 ARHGEF10O15013 1369 aa17.38■□□□□ 0.37
KRT40-201ENST00000377755 MED1Q15648 1581 aaPredicted RBP17.38■□□□□ 0.37
KRT40-201ENST00000377755 GTF3C3Q9Y5Q9 886 aa17.37■□□□□ 0.37
KRT40-201ENST00000377755 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
KRT40-201ENST00000377755 NFAT5O94916 1531 aa17.37■□□□□ 0.37
KRT40-201ENST00000377755 PEAK1Q9H792 1746 aa17.37■□□□□ 0.37
KRT40-201ENST00000377755 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
KRT40-201ENST00000377755 DIAPH1O60610 1272 aaKnown RBP17.37■□□□□ 0.37
KRT40-201ENST00000377755 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
KRT40-201ENST00000377755 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
KRT40-201ENST00000377755 AMPHP49418 695 aa17.35■□□□□ 0.37
KRT40-201ENST00000377755 IL13P35225 146 aa17.34■□□□□ 0.37
KRT40-201ENST00000377755 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
KRT40-201ENST00000377755 ARHGEF25Q86VW2 580 aa17.34■□□□□ 0.37
KRT40-201ENST00000377755 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
KRT40-201ENST00000377755 FLT4P35916 1363 aa17.34■□□□□ 0.37
KRT40-201ENST00000377755 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.37
KRT40-201ENST00000377755 ZBTB7CA1YPR0 619 aa17.33■□□□□ 0.37
KRT40-201ENST00000377755 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.37
KRT40-201ENST00000377755 ZC3H6P61129 1189 aaKnown RBP17.33■□□□□ 0.37
KRT40-201ENST00000377755 NUDCQ9Y266 331 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms