RNA–Protein interactions for RNA: ENST00000377244.7

SNX15-202, Transcript of sorting nexin 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX15, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-202ENST00000377244 NME9Q86XW9 330 aa34.57■■■■□ 3.12
SNX15-202ENST00000377244 XPCQ01831 940 aaPredicted RBP34.55■■■■□ 3.12
SNX15-202ENST00000377244 NSD2O96028 1365 aa34.53■■■■□ 3.12
SNX15-202ENST00000377244 DDX17Q92841 729 aaKnown RBP34.53■■■■□ 3.12
SNX15-202ENST00000377244 ZRANB1Q9UGI0 708 aa34.53■■■■□ 3.12
SNX15-202ENST00000377244 ANKRD26Q9UPS8 1709 aa34.53■■■■□ 3.12
SNX15-202ENST00000377244 BRINP3Q76B58 766 aa34.52■■■■□ 3.12
SNX15-202ENST00000377244 PSME1Q06323 249 aa34.51■■■■□ 3.12
SNX15-202ENST00000377244 MORC1Q86VD1 984 aa34.5■■■■□ 3.11
SNX15-202ENST00000377244 TNNT2P45379 298 aaPredicted RBP34.49■■■■□ 3.11
SNX15-202ENST00000377244 CCDC184Q52MB2 194 aa34.49■■■■□ 3.11
SNX15-202ENST00000377244 MYBBP1AQ9BQG0 1328 aaKnown RBP34.49■■■■□ 3.11
SNX15-202ENST00000377244 PAK3O75914 559 aaPredicted RBP34.47■■■■□ 3.11
SNX15-202ENST00000377244 PIK3C2AO00443 1686 aa34.47■■■■□ 3.11
SNX15-202ENST00000377244 CCER2I3L3R5 266 aa34.45■■■■□ 3.11
SNX15-202ENST00000377244 TTC21AQ8NDW8 1320 aa34.45■■■■□ 3.11
SNX15-202ENST00000377244 TRPM3Q9HCF6 1732 aaPredicted RBP34.44■■■■□ 3.1
SNX15-202ENST00000377244 PPP2R1AP30153 589 aa34.43■■■■□ 3.1
SNX15-202ENST00000377244 KRT28Q7Z3Y7 464 aa34.43■■■■□ 3.1
SNX15-202ENST00000377244 NPHP3Q7Z494 1330 aa34.41■■■■□ 3.1
SNX15-202ENST00000377244 NUTM2GQ5VZR2 741 aa34.41■■■■□ 3.1
SNX15-202ENST00000377244 OVOS2A0A0J9YW53 1432 aa34.4■■■■□ 3.1
SNX15-202ENST00000377244 OVOS2Q6IE36 1432 aa34.4■■■■□ 3.1
SNX15-202ENST00000377244 COG3Q96JB2 828 aa34.4■■■■□ 3.1
SNX15-202ENST00000377244 BRD4O60885 1362 aaPredicted RBP34.39■■■■□ 3.1
SNX15-202ENST00000377244 NLRP13Q86W25 1043 aa34.38■■■■□ 3.09
SNX15-202ENST00000377244 ABTB2Q8N961 1025 aa34.38■■■■□ 3.09
SNX15-202ENST00000377244 PXDNQ92626 1479 aa34.38■■■■□ 3.09
SNX15-202ENST00000377244 ROBO1Q9Y6N7 1651 aa34.38■■■■□ 3.09
SNX15-202ENST00000377244 FBLN1P23142 703 aa34.38■■■■□ 3.09
SNX15-202ENST00000377244 MRS2Q9HD23 443 aa34.38■■■■□ 3.09
SNX15-202ENST00000377244 MARF1Q9Y4F3 1742 aaKnown RBP34.36■■■■□ 3.09
SNX15-202ENST00000377244 NLRP6P59044 892 aa34.34■■■■□ 3.09
SNX15-202ENST00000377244 NHSL1Q5SYE7 1610 aa34.34■■■■□ 3.09
SNX15-202ENST00000377244 USP31Q70CQ4 1352 aa34.33■■■■□ 3.09
SNX15-202ENST00000377244 LMOD2Q6P5Q4 547 aa34.32■■■■□ 3.08
SNX15-202ENST00000377244 CERKQ8TCT0 537 aa34.32■■■■□ 3.08
SNX15-202ENST00000377244 ALS2Q96Q42 1657 aa34.31■■■■□ 3.08
SNX15-202ENST00000377244 USP54Q70EL1 1684 aa34.3■■■■□ 3.08
SNX15-202ENST00000377244 SOX12O15370 315 aa34.3■■■■□ 3.08
SNX15-202ENST00000377244 IQSEC2Q5JU85 1478 aa34.29■■■■□ 3.08
SNX15-202ENST00000377244 TOM1O60784 492 aa34.29■■■■□ 3.08
SNX15-202ENST00000377244 UBAP1LF5GYI3 381 aa34.28■■■■□ 3.08
SNX15-202ENST00000377244 SBNO1A3KN83 1393 aa34.28■■■■□ 3.08
SNX15-202ENST00000377244 PLEKHG5O94827 1062 aa34.28■■■■□ 3.08
SNX15-202ENST00000377244 PIP4K2BP78356 416 aa34.28■■■■□ 3.08
SNX15-202ENST00000377244 SOS2Q07890 1332 aaPredicted RBP34.27■■■■□ 3.08
SNX15-202ENST00000377244 MTHFSP49914 203 aa34.26■■■■□ 3.08
SNX15-202ENST00000377244 MAP2P11137 1827 aaKnown RBP34.26■■■■□ 3.08
SNX15-202ENST00000377244 TNS3Q68CZ2 1445 aa34.26■■■■□ 3.07
SNX15-202ENST00000377244 SCAF1Q9H7N4 1312 aaKnown RBP34.26■■■■□ 3.07
SNX15-202ENST00000377244 SPATA31A3Q5VYP0 1347 aa34.23■■■■□ 3.07
SNX15-202ENST00000377244 RRS1Q15050 365 aaKnown RBP34.23■■■■□ 3.07
SNX15-202ENST00000377244 POLKQ9UBT6 870 aa34.22■■■■□ 3.07
SNX15-202ENST00000377244 EMILIN1Q9Y6C2 1016 aa34.21■■■■□ 3.07
SNX15-202ENST00000377244 AATKQ6ZMQ8 1374 aa34.21■■■■□ 3.07
SNX15-202ENST00000377244 AHDC1Q5TGY3 1603 aaPredicted RBP34.2■■■■□ 3.06
SNX15-202ENST00000377244 PPM1GO15355 546 aaPredicted RBP34.18■■■■□ 3.06
SNX15-202ENST00000377244 FAM9BQ8IZU0 186 aa34.17■■■■□ 3.06
SNX15-202ENST00000377244 MED1Q15648 1581 aaPredicted RBP34.17■■■■□ 3.06
SNX15-202ENST00000377244 PNISRQ8TF01 805 aaKnown RBP34.15■■■■□ 3.06
SNX15-202ENST00000377244 USP19O94966 1318 aa34.15■■■■□ 3.06
SNX15-202ENST00000377244 SLIT3O75094 1523 aa34.14■■■■□ 3.06
SNX15-202ENST00000377244 NFAT5O94916 1531 aa34.14■■■■□ 3.06
SNX15-202ENST00000377244 ARHGEF10O15013 1369 aa34.14■■■■□ 3.06
SNX15-202ENST00000377244 SMG6Q86US8 1419 aaKnown RBP34.13■■■■□ 3.05
SNX15-202ENST00000377244 PEAK1Q9H792 1746 aa34.13■■■■□ 3.05
SNX15-202ENST00000377244 CABLES1Q8TDN4 633 aa34.12■■■■□ 3.05
SNX15-202ENST00000377244 PHLPP1O60346 1717 aa34.12■■■■□ 3.05
SNX15-202ENST00000377244 MAP3K19Q56UN5 1328 aa34.12■■■■□ 3.05
SNX15-202ENST00000377244 YTHDC1Q96MU7 727 aaKnown RBP34.1■■■■□ 3.05
SNX15-202ENST00000377244 CRYBG1Q9Y4K1 1723 aa34.1■■■■□ 3.05
SNX15-202ENST00000377244 PHRF1Q9P1Y6 1649 aaKnown RBP34.1■■■■□ 3.05
SNX15-202ENST00000377244 GCP02774 474 aa34.1■■■■□ 3.05
SNX15-202ENST00000377244 COL3A1P02461 1466 aaPredicted RBP34.09■■■■□ 3.05
SNX15-202ENST00000377244 SHPRHQ149N8 1683 aa34.09■■■■□ 3.05
SNX15-202ENST00000377244 CFAP53Q96M91 514 aa34.08■■■■□ 3.05
SNX15-202ENST00000377244 LTN1O94822 1766 aa34.08■■■■□ 3.05
SNX15-202ENST00000377244 COL16A1Q07092 1604 aaPredicted RBP34.08■■■■□ 3.05
SNX15-202ENST00000377244 CDK12Q9NYV4 1490 aaPredicted RBP34.08■■■■□ 3.05
SNX15-202ENST00000377244 PNPLA6Q8IY17 1366 aa34.07■■■■□ 3.04
SNX15-202ENST00000377244 KCNH5Q8NCM2 988 aa34.06■■■■□ 3.04
SNX15-202ENST00000377244 ZBTB7CA1YPR0 619 aa34.03■■■■□ 3.04
SNX15-202ENST00000377244 LRRC59Q96AG4 307 aaKnown RBP34.03■■■■□ 3.04
SNX15-202ENST00000377244 ABCA3Q99758 1704 aa34.01■■■■□ 3.04
SNX15-202ENST00000377244 INSRP06213 1382 aa34.01■■■■□ 3.03
SNX15-202ENST00000377244 AMPHP49418 695 aa34■■■■□ 3.03
SNX15-202ENST00000377244 HSP90AB2PQ58FF8 381 aa34■■■■□ 3.03
SNX15-202ENST00000377244 ZC3H6P61129 1189 aaKnown RBP34■■■■□ 3.03
SNX15-202ENST00000377244 WDR43Q15061 677 aaKnown RBP eCLIP34■■■■□ 3.03
SNX15-202ENST00000377244 FLT4P35916 1363 aa33.99■■■■□ 3.03
SNX15-202ENST00000377244 ADAMTS8Q9UP79 889 aa33.98■■■■□ 3.03
SNX15-202ENST00000377244 DIAPH1O60610 1272 aaKnown RBP33.97■■■■□ 3.03
SNX15-202ENST00000377244 ARHGEF25Q86VW2 580 aa33.97■■■■□ 3.03
SNX15-202ENST00000377244 HOXC9P31274 260 aa33.96■■■■□ 3.03
SNX15-202ENST00000377244 U2SURPO15042 1029 aaKnown RBP33.92■■■■□ 3.02
SNX15-202ENST00000377244 KIF24Q5T7B8 1368 aa33.92■■■■□ 3.02
SNX15-202ENST00000377244 COL22A1Q8NFW1 1626 aaPredicted RBP33.92■■■■□ 3.02
SNX15-202ENST00000377244 IL13P35225 146 aa33.92■■■■□ 3.02
SNX15-202ENST00000377244 RTL1A6NKG5 1358 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms