RNA–Protein interactions for RNA: ENST00000375641.6

C6orf48-206, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-206ENST00000375641 ARHGEF28Q8N1W1 1705 aaKnown RBP27.17■■□□□ 1.94
C6orf48-206ENST00000375641 BRWD3Q6RI45 1802 aa27.16■■□□□ 1.94
C6orf48-206ENST00000375641 ATP7BP35670 1465 aa27.16■■□□□ 1.94
C6orf48-206ENST00000375641 NBPF1Q3BBV0 1214 aa27.15■■□□□ 1.94
C6orf48-206ENST00000375641 FAM98CQ17RN3 349 aaKnown RBP27.14■■□□□ 1.94
C6orf48-206ENST00000375641 DEFB132Q7Z7B7 95 aa27.13■■□□□ 1.93
C6orf48-206ENST00000375641 A0A0G2JS52 829 aa27.12■■□□□ 1.93
C6orf48-206ENST00000375641 MYT1Q01538 1121 aa27.12■■□□□ 1.93
C6orf48-206ENST00000375641 SF3B2Q13435 895 aaKnown RBP27.12■■□□□ 1.93
C6orf48-206ENST00000375641 CCDC61Q9Y6R9 512 aa27.12■■□□□ 1.93
C6orf48-206ENST00000375641 COL14A1Q05707 1796 aaKnown RBP27.12■■□□□ 1.93
C6orf48-206ENST00000375641 PRDM11Q9NQV5 511 aa27.11■■□□□ 1.93
C6orf48-206ENST00000375641 NRAPQ86VF7 1730 aa27.1■■□□□ 1.93
C6orf48-206ENST00000375641 PLEKHG3A1L390 1219 aa27.1■■□□□ 1.93
C6orf48-206ENST00000375641 NBPF8Q3BBV2 869 aa27.1■■□□□ 1.93
C6orf48-206ENST00000375641 ACEP12821 1306 aa27.1■■□□□ 1.93
C6orf48-206ENST00000375641 SPATA31A5Q5VU36 1347 aa27.1■■□□□ 1.93
C6orf48-206ENST00000375641 SPATA31A7Q8IWB4 1347 aa27.1■■□□□ 1.93
C6orf48-206ENST00000375641 POLR3AO14802 1390 aaPredicted RBP27.09■■□□□ 1.93
C6orf48-206ENST00000375641 KIAA1210Q9ULL0 1709 aa27.08■■□□□ 1.93
C6orf48-206ENST00000375641 ITSN1Q15811 1721 aa27.07■■□□□ 1.92
C6orf48-206ENST00000375641 NUTM2GQ5VZR2 741 aa27.07■■□□□ 1.92
C6orf48-206ENST00000375641 KIAA0232Q92628 1395 aa27.07■■□□□ 1.92
C6orf48-206ENST00000375641 CRYBG1Q9Y4K1 1723 aa27.06■■□□□ 1.92
C6orf48-206ENST00000375641 ZC3H6P61129 1189 aaKnown RBP27.05■■□□□ 1.92
C6orf48-206ENST00000375641 CHRNA2Q15822 529 aa27.05■■□□□ 1.92
C6orf48-206ENST00000375641 CENPJQ9HC77 1338 aaPredicted RBP27.02■■□□□ 1.92
C6orf48-206ENST00000375641 SRPK2P78362 688 aaKnown RBP27.01■■□□□ 1.91
C6orf48-206ENST00000375641 ABTB2Q8N961 1025 aa27.01■■□□□ 1.91
C6orf48-206ENST00000375641 CABP2Q9NPB3 220 aa27■■□□□ 1.91
C6orf48-206ENST00000375641 TOPAZ1Q8N9V7 1692 aa26.99■■□□□ 1.91
C6orf48-206ENST00000375641 SPATA31A1Q5TZJ5 1347 aa26.99■■□□□ 1.91
C6orf48-206ENST00000375641 FAM182BQ5T319 152 aa26.99■■□□□ 1.91
C6orf48-206ENST00000375641 L3MBTL2Q969R5 705 aa26.99■■□□□ 1.91
C6orf48-206ENST00000375641 STRN4Q9NRL3 753 aa26.99■■□□□ 1.91
C6orf48-206ENST00000375641 BAG6P46379 1132 aa26.98■■□□□ 1.91
C6orf48-206ENST00000375641 PHRF1Q9P1Y6 1649 aaKnown RBP26.96■■□□□ 1.91
C6orf48-206ENST00000375641 PPIP5K1Q6PFW1 1433 aa26.96■■□□□ 1.91
C6orf48-206ENST00000375641 EVA1CP58658 441 aa26.95■■□□□ 1.9
C6orf48-206ENST00000375641 SIN3AQ96ST3 1273 aa26.94■■□□□ 1.9
C6orf48-206ENST00000375641 USP19O94966 1318 aa26.93■■□□□ 1.9
C6orf48-206ENST00000375641 THSD7AQ9UPZ6 1657 aa26.93■■□□□ 1.9
C6orf48-206ENST00000375641 NLRP13Q86W25 1043 aa26.93■■□□□ 1.9
C6orf48-206ENST00000375641 CABP1Q9NZU7 370 aa26.92■■□□□ 1.9
C6orf48-206ENST00000375641 GCP02774 474 aa26.91■■□□□ 1.9
C6orf48-206ENST00000375641 EN1Q05925 392 aaPredicted RBP26.91■■□□□ 1.9
C6orf48-206ENST00000375641 USP35Q9P2H5 1018 aa26.91■■□□□ 1.9
C6orf48-206ENST00000375641 CPDO75976 1380 aa26.91■■□□□ 1.9
C6orf48-206ENST00000375641 SSH2Q76I76 1423 aa26.9■■□□□ 1.9
C6orf48-206ENST00000375641 BRD4O60885 1362 aaPredicted RBP26.89■■□□□ 1.9
C6orf48-206ENST00000375641 LARP1Q6PKG0 1096 aaKnown RBP26.89■■□□□ 1.9
C6orf48-206ENST00000375641 NEUROD1Q13562 356 aa26.88■■□□□ 1.89
C6orf48-206ENST00000375641 BARGINQ6ZT62 677 aa26.88■■□□□ 1.89
C6orf48-206ENST00000375641 CAMTA1Q9Y6Y1 1673 aa26.88■■□□□ 1.89
C6orf48-206ENST00000375641 NRKQ7Z2Y5 1582 aa26.88■■□□□ 1.89
C6orf48-206ENST00000375641 FAM196AQ6ZSG2 479 aa26.87■■□□□ 1.89
C6orf48-206ENST00000375641 PSDA5PKW4 1024 aaPredicted RBP26.85■■□□□ 1.89
C6orf48-206ENST00000375641 QRICH2Q9H0J4 1663 aa26.85■■□□□ 1.89
C6orf48-206ENST00000375641 EVC2Q86UK5 1308 aa26.85■■□□□ 1.89
C6orf48-206ENST00000375641 TRIM37O94972 964 aa26.84■■□□□ 1.89
C6orf48-206ENST00000375641 NLRP6P59044 892 aa26.84■■□□□ 1.89
C6orf48-206ENST00000375641 TCP11L2Q8N4U5 519 aa26.84■■□□□ 1.89
C6orf48-206ENST00000375641 USP6P35125 1406 aa26.83■■□□□ 1.89
C6orf48-206ENST00000375641 RGPD1P0DJD0 1748 aa26.83■■□□□ 1.89
C6orf48-206ENST00000375641 PDE3BQ13370 1112 aa26.83■■□□□ 1.89
C6orf48-206ENST00000375641 DISP2A7MBM2 1401 aa26.82■■□□□ 1.88
C6orf48-206ENST00000375641 EZH2Q15910 746 aaKnown RBP26.81■■□□□ 1.88
C6orf48-206ENST00000375641 THRAP3Q9Y2W1 955 aaKnown RBP26.81■■□□□ 1.88
C6orf48-206ENST00000375641 LMO7Q8WWI1 1683 aa26.81■■□□□ 1.88
C6orf48-206ENST00000375641 ROCK2O75116 1388 aaKnown RBP26.8■■□□□ 1.88
C6orf48-206ENST00000375641 CAMKK2Q96RR4 588 aa26.79■■□□□ 1.88
C6orf48-206ENST00000375641 TRPM1Q7Z4N2 1603 aa26.79■■□□□ 1.88
C6orf48-206ENST00000375641 ZBTB7CA1YPR0 619 aa26.78■■□□□ 1.88
C6orf48-206ENST00000375641 COL5A2P05997 1499 aaPredicted RBP26.77■■□□□ 1.88
C6orf48-206ENST00000375641 APBA3O96018 575 aa26.77■■□□□ 1.88
C6orf48-206ENST00000375641 ZNF692Q9BU19 519 aaPredicted RBP26.76■■□□□ 1.87
C6orf48-206ENST00000375641 AATKQ6ZMQ8 1374 aa26.75■■□□□ 1.87
C6orf48-206ENST00000375641 R3HDM1Q15032 1099 aaKnown RBP26.75■■□□□ 1.87
C6orf48-206ENST00000375641 TNS1Q9HBL0 1735 aaKnown RBP26.75■■□□□ 1.87
C6orf48-206ENST00000375641 SLIT3O75094 1523 aa26.74■■□□□ 1.87
C6orf48-206ENST00000375641 TTC21BQ7Z4L5 1316 aa26.73■■□□□ 1.87
C6orf48-206ENST00000375641 CRB1P82279 1406 aa26.73■■□□□ 1.87
C6orf48-206ENST00000375641 LRP5O75197 1615 aa26.71■■□□□ 1.87
C6orf48-206ENST00000375641 AXIN2Q9Y2T1 843 aa26.7■■□□□ 1.86
C6orf48-206ENST00000375641 PARD3Q8TEW0 1356 aa26.7■■□□□ 1.86
C6orf48-206ENST00000375641 TOM1L2Q6ZVM7 507 aa26.68■■□□□ 1.86
C6orf48-206ENST00000375641 ARHGEF25Q86VW2 580 aa26.68■■□□□ 1.86
C6orf48-206ENST00000375641 KCNH5Q8NCM2 988 aa26.68■■□□□ 1.86
C6orf48-206ENST00000375641 PIK3C2AO00443 1686 aa26.68■■□□□ 1.86
C6orf48-206ENST00000375641 TTC21AQ8NDW8 1320 aa26.67■■□□□ 1.86
C6orf48-206ENST00000375641 CPSF1Q10570 1443 aaKnown RBP26.66■■□□□ 1.86
C6orf48-206ENST00000375641 C11orf95C9JLR9 678 aaPredicted RBP26.65■■□□□ 1.86
C6orf48-206ENST00000375641 WDR17Q8IZU2 1322 aa26.65■■□□□ 1.86
C6orf48-206ENST00000375641 KTN1Q86UP2 1357 aaKnown RBP26.64■■□□□ 1.86
C6orf48-206ENST00000375641 SOX12O15370 315 aa26.64■■□□□ 1.86
C6orf48-206ENST00000375641 CARD11Q9BXL7 1154 aa26.64■■□□□ 1.86
C6orf48-206ENST00000375641 COL18A1P39060 1754 aa26.63■■□□□ 1.85
C6orf48-206ENST00000375641 PARP4Q9UKK3 1724 aaKnown RBP26.63■■□□□ 1.85
C6orf48-206ENST00000375641 DDB1Q16531 1140 aa26.63■■□□□ 1.85
C6orf48-206ENST00000375641 SBNO2Q9Y2G9 1366 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms