RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.47■□□□□ 0.87
NELFE-201ENST00000375425 SEPT12Q8IYM1 358 aa20.46■□□□□ 0.87
NELFE-201ENST00000375425 GLI3P10071 1580 aa20.46■□□□□ 0.87
NELFE-201ENST00000375425 ONECUT3O60422 494 aaPredicted RBP20.45■□□□□ 0.86
NELFE-201ENST00000375425 POLR3AO14802 1390 aaPredicted RBP20.45■□□□□ 0.86
NELFE-201ENST00000375425 ALS2Q96Q42 1657 aa20.45■□□□□ 0.86
NELFE-201ENST00000375425 NUTM2GQ5VZR2 741 aa20.44■□□□□ 0.86
NELFE-201ENST00000375425 CABP2Q9NPB3 220 aa20.44■□□□□ 0.86
NELFE-201ENST00000375425 SRCAPQ6ZRS2 3230 aa20.44■□□□□ 0.86
NELFE-201ENST00000375425 CCDC125Q86Z20 511 aa20.44■□□□□ 0.86
NELFE-201ENST00000375425 ABCA3Q99758 1704 aa20.43■□□□□ 0.86
NELFE-201ENST00000375425 PRDM11Q9NQV5 511 aa20.43■□□□□ 0.86
NELFE-201ENST00000375425 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
NELFE-201ENST00000375425 ITSN1Q15811 1721 aa20.41■□□□□ 0.86
NELFE-201ENST00000375425 PLCH1Q4KWH8 1693 aa20.4■□□□□ 0.86
NELFE-201ENST00000375425 NWD2Q9ULI1 1742 aa20.4■□□□□ 0.86
NELFE-201ENST00000375425 ZC3H6P61129 1189 aaKnown RBP20.4■□□□□ 0.86
NELFE-201ENST00000375425 FAM98CQ17RN3 349 aaKnown RBP20.4■□□□□ 0.86
NELFE-201ENST00000375425 CABP1Q9NZU7 370 aa20.39■□□□□ 0.85
NELFE-201ENST00000375425 PPIP5K1Q6PFW1 1433 aa20.39■□□□□ 0.85
NELFE-201ENST00000375425 A0A0G2JS52 829 aa20.38■□□□□ 0.85
NELFE-201ENST00000375425 MYT1Q01538 1121 aa20.38■□□□□ 0.85
NELFE-201ENST00000375425 CHRNA2Q15822 529 aa20.38■□□□□ 0.85
NELFE-201ENST00000375425 KRT27Q7Z3Y8 459 aa20.38■□□□□ 0.85
NELFE-201ENST00000375425 ROCK2O75116 1388 aaKnown RBP20.38■□□□□ 0.85
NELFE-201ENST00000375425 KIAA0232Q92628 1395 aa20.38■□□□□ 0.85
NELFE-201ENST00000375425 SPATA31A5Q5VU36 1347 aa20.36■□□□□ 0.85
NELFE-201ENST00000375425 EVC2Q86UK5 1308 aa20.36■□□□□ 0.85
NELFE-201ENST00000375425 SPATA31A7Q8IWB4 1347 aa20.36■□□□□ 0.85
NELFE-201ENST00000375425 COL14A1Q05707 1796 aaKnown RBP20.35■□□□□ 0.85
NELFE-201ENST00000375425 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
NELFE-201ENST00000375425 NLRP13Q86W25 1043 aa20.34■□□□□ 0.85
NELFE-201ENST00000375425 STRN4Q9NRL3 753 aa20.34■□□□□ 0.85
NELFE-201ENST00000375425 BLMP54132 1417 aaPredicted RBP20.33■□□□□ 0.85
NELFE-201ENST00000375425 CRYBG1Q9Y4K1 1723 aa20.32■□□□□ 0.84
NELFE-201ENST00000375425 GCP02774 474 aa20.32■□□□□ 0.84
NELFE-201ENST00000375425 TRPM1Q7Z4N2 1603 aa20.32■□□□□ 0.84
NELFE-201ENST00000375425 NRAPQ86VF7 1730 aa20.32■□□□□ 0.84
NELFE-201ENST00000375425 EVA1CP58658 441 aa20.31■□□□□ 0.84
NELFE-201ENST00000375425 SF3B2Q13435 895 aaKnown RBP20.31■□□□□ 0.84
NELFE-201ENST00000375425 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
NELFE-201ENST00000375425 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
NELFE-201ENST00000375425 BRWD3Q6RI45 1802 aa20.31■□□□□ 0.84
NELFE-201ENST00000375425 BRD4O60885 1362 aaPredicted RBP20.3■□□□□ 0.84
NELFE-201ENST00000375425 USP19O94966 1318 aa20.3■□□□□ 0.84
NELFE-201ENST00000375425 SPATA31A1Q5TZJ5 1347 aa20.3■□□□□ 0.84
NELFE-201ENST00000375425 DEFB132Q7Z7B7 95 aa20.3■□□□□ 0.84
NELFE-201ENST00000375425 NLRP6P59044 892 aa20.29■□□□□ 0.84
NELFE-201ENST00000375425 TRIM26Q12899 539 aaPredicted RBP20.28■□□□□ 0.84
NELFE-201ENST00000375425 USP6P35125 1406 aa20.28■□□□□ 0.84
NELFE-201ENST00000375425 FAM182BQ5T319 152 aa20.27■□□□□ 0.84
NELFE-201ENST00000375425 CARD11Q9BXL7 1154 aa20.27■□□□□ 0.84
NELFE-201ENST00000375425 USP35Q9P2H5 1018 aa20.27■□□□□ 0.84
NELFE-201ENST00000375425 CPDO75976 1380 aa20.27■□□□□ 0.84
NELFE-201ENST00000375425 PHRF1Q9P1Y6 1649 aaKnown RBP20.27■□□□□ 0.84
NELFE-201ENST00000375425 ZNF692Q9BU19 519 aaPredicted RBP20.27■□□□□ 0.83
NELFE-201ENST00000375425 TONSLQ96HA7 1378 aa20.26■□□□□ 0.83
NELFE-201ENST00000375425 LARP1Q6PKG0 1096 aaKnown RBP20.25■□□□□ 0.83
NELFE-201ENST00000375425 SSH2Q76I76 1423 aa20.24■□□□□ 0.83
NELFE-201ENST00000375425 ZBTB7CA1YPR0 619 aa20.23■□□□□ 0.83
NELFE-201ENST00000375425 CAMTA1Q9Y6Y1 1673 aa20.23■□□□□ 0.83
NELFE-201ENST00000375425 NRKQ7Z2Y5 1582 aa20.22■□□□□ 0.83
NELFE-201ENST00000375425 BARGINQ6ZT62 677 aa20.22■□□□□ 0.83
NELFE-201ENST00000375425 TTC21BQ7Z4L5 1316 aa20.22■□□□□ 0.83
NELFE-201ENST00000375425 BAG6P46379 1132 aa20.2■□□□□ 0.82
NELFE-201ENST00000375425 TCP11L2Q8N4U5 519 aa20.2■□□□□ 0.82
NELFE-201ENST00000375425 SBNO2Q9Y2G9 1366 aa20.19■□□□□ 0.82
NELFE-201ENST00000375425 THSD7AQ9UPZ6 1657 aa20.18■□□□□ 0.82
NELFE-201ENST00000375425 PDE3BQ13370 1112 aa20.18■□□□□ 0.82
NELFE-201ENST00000375425 FAM196AQ6ZSG2 479 aa20.18■□□□□ 0.82
NELFE-201ENST00000375425 THRAP3Q9Y2W1 955 aaKnown RBP20.18■□□□□ 0.82
NELFE-201ENST00000375425 CPSF1Q10570 1443 aaKnown RBP20.17■□□□□ 0.82
NELFE-201ENST00000375425 TTC21AQ8NDW8 1320 aa20.17■□□□□ 0.82
NELFE-201ENST00000375425 AATKQ6ZMQ8 1374 aa20.17■□□□□ 0.82
NELFE-201ENST00000375425 KTN1Q86UP2 1357 aaKnown RBP20.17■□□□□ 0.82
NELFE-201ENST00000375425 EN1Q05925 392 aaPredicted RBP20.17■□□□□ 0.82
NELFE-201ENST00000375425 TMC1Q8TDI8 760 aa20.17■□□□□ 0.82
NELFE-201ENST00000375425 LMO7Q8WWI1 1683 aa20.16■□□□□ 0.82
NELFE-201ENST00000375425 SOX12O15370 315 aa20.16■□□□□ 0.82
NELFE-201ENST00000375425 KCNH5Q8NCM2 988 aa20.16■□□□□ 0.82
NELFE-201ENST00000375425 AXIN2Q9Y2T1 843 aa20.16■□□□□ 0.82
NELFE-201ENST00000375425 COL5A2P05997 1499 aaPredicted RBP20.16■□□□□ 0.82
NELFE-201ENST00000375425 SLIT3O75094 1523 aa20.15■□□□□ 0.82
NELFE-201ENST00000375425 ARHGEF25Q86VW2 580 aa20.15■□□□□ 0.82
NELFE-201ENST00000375425 TRIM37O94972 964 aa20.14■□□□□ 0.81
NELFE-201ENST00000375425 SLC12A5Q9H2X9 1139 aa20.14■□□□□ 0.81
NELFE-201ENST00000375425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.13■□□□□ 0.81
NELFE-201ENST00000375425 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
NELFE-201ENST00000375425 TOM1L2Q6ZVM7 507 aa20.12■□□□□ 0.81
NELFE-201ENST00000375425 CRB1P82279 1406 aa20.12■□□□□ 0.81
NELFE-201ENST00000375425 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
NELFE-201ENST00000375425 HDGFL2Q7Z4V5 671 aaPredicted RBP20.1■□□□□ 0.81
NELFE-201ENST00000375425 EZH2Q15910 746 aaKnown RBP20.1■□□□□ 0.81
NELFE-201ENST00000375425 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
NELFE-201ENST00000375425 APBA3O96018 575 aa20.09■□□□□ 0.81
NELFE-201ENST00000375425 NME9Q86XW9 330 aa20.09■□□□□ 0.81
NELFE-201ENST00000375425 TESK2Q96S53 571 aa20.09■□□□□ 0.81
NELFE-201ENST00000375425 WDR17Q8IZU2 1322 aa20.09■□□□□ 0.81
NELFE-201ENST00000375425 AKAP12Q02952 1782 aa20.08■□□□□ 0.8
NELFE-201ENST00000375425 CD163L1Q9NR16 1453 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms