RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 ZNF326Q5BKZ1 582 aaKnown RBP16.67■□□□□ 0.26
ABCA1-201ENST00000374733 FAM182BQ5T319 152 aa16.67■□□□□ 0.26
ABCA1-201ENST00000374733 CEP350Q5VT06 3117 aa16.66■□□□□ 0.26
ABCA1-201ENST00000374733 SPOCK2Q92563 424 aa16.66■□□□□ 0.26
ABCA1-201ENST00000374733 CDC42BPGQ6DT37 1551 aa16.65■□□□□ 0.26
ABCA1-201ENST00000374733 HAP1P54257 671 aaPredicted RBP16.65■□□□□ 0.26
ABCA1-201ENST00000374733 FAM98CQ17RN3 349 aaKnown RBP16.65■□□□□ 0.26
ABCA1-201ENST00000374733 ABCA3Q99758 1704 aa16.65■□□□□ 0.26
ABCA1-201ENST00000374733 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.26
ABCA1-201ENST00000374733 C1QTNF8P60827 252 aa16.64■□□□□ 0.25
ABCA1-201ENST00000374733 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
ABCA1-201ENST00000374733 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
ABCA1-201ENST00000374733 RREB1Q92766 1687 aa16.63■□□□□ 0.25
ABCA1-201ENST00000374733 NRAPQ86VF7 1730 aa16.63■□□□□ 0.25
ABCA1-201ENST00000374733 NEXMIFQ5QGS0 1516 aa16.63■□□□□ 0.25
ABCA1-201ENST00000374733 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
ABCA1-201ENST00000374733 SPATA31A3Q5VYP0 1347 aa16.61■□□□□ 0.25
ABCA1-201ENST00000374733 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
ABCA1-201ENST00000374733 HFM1A2PYH4 1435 aa16.6■□□□□ 0.25
ABCA1-201ENST00000374733 CABLES1Q8TDN4 633 aa16.59■□□□□ 0.25
ABCA1-201ENST00000374733 CAMKK2Q96RR4 588 aa16.59■□□□□ 0.25
ABCA1-201ENST00000374733 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
ABCA1-201ENST00000374733 CHD4Q14839 1912 aa16.58■□□□□ 0.25
ABCA1-201ENST00000374733 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
ABCA1-201ENST00000374733 THSD7AQ9UPZ6 1657 aa16.56■□□□□ 0.24
ABCA1-201ENST00000374733 CCDC144AA2RUR9 1427 aa16.56■□□□□ 0.24
ABCA1-201ENST00000374733 PRAG1Q86YV5 1406 aa16.56■□□□□ 0.24
ABCA1-201ENST00000374733 TRIM37O94972 964 aa16.56■□□□□ 0.24
ABCA1-201ENST00000374733 PARD3Q8TEW0 1356 aa16.55■□□□□ 0.24
ABCA1-201ENST00000374733 KCNQ2O43526 872 aa16.55■□□□□ 0.24
ABCA1-201ENST00000374733 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
ABCA1-201ENST00000374733 APBA3O96018 575 aa16.54■□□□□ 0.24
ABCA1-201ENST00000374733 NUBP1P53384 320 aa16.54■□□□□ 0.24
ABCA1-201ENST00000374733 NRKQ7Z2Y5 1582 aa16.54■□□□□ 0.24
ABCA1-201ENST00000374733 NAIPQ13075 1403 aa16.53■□□□□ 0.24
ABCA1-201ENST00000374733 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
ABCA1-201ENST00000374733 NBPF14Q5TI25 921 aa16.53■□□□□ 0.24
ABCA1-201ENST00000374733 CLTCL1P53675 1640 aa16.52■□□□□ 0.24
ABCA1-201ENST00000374733 FAM83GA6ND36 823 aa16.52■□□□□ 0.24
ABCA1-201ENST00000374733 FMN2Q9NZ56 1722 aa16.52■□□□□ 0.24
ABCA1-201ENST00000374733 KIF1BO60333 1816 aa16.52■□□□□ 0.23
ABCA1-201ENST00000374733 KRT28Q7Z3Y7 464 aa16.51■□□□□ 0.23
ABCA1-201ENST00000374733 MYOM1P52179 1685 aa16.5■□□□□ 0.23
ABCA1-201ENST00000374733 PAK3O75914 559 aaPredicted RBP16.5■□□□□ 0.23
ABCA1-201ENST00000374733 LMOD2Q6P5Q4 547 aa16.5■□□□□ 0.23
ABCA1-201ENST00000374733 BTG4Q9NY30 223 aa16.5■□□□□ 0.23
ABCA1-201ENST00000374733 RGPD8O14715 1765 aaPredicted RBP16.5■□□□□ 0.23
ABCA1-201ENST00000374733 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
ABCA1-201ENST00000374733 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
ABCA1-201ENST00000374733 NUP155O75694 1391 aa16.49■□□□□ 0.23
ABCA1-201ENST00000374733 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
ABCA1-201ENST00000374733 FAM196AQ6ZSG2 479 aa16.47■□□□□ 0.23
ABCA1-201ENST00000374733 SPATA31A5Q5VU36 1347 aa16.46■□□□□ 0.23
ABCA1-201ENST00000374733 SPATA31A7Q8IWB4 1347 aa16.46■□□□□ 0.23
ABCA1-201ENST00000374733 C19orf67A6NJJ6 358 aa16.46■□□□□ 0.23
ABCA1-201ENST00000374733 HAX1O00165 279 aa16.46■□□□□ 0.23
ABCA1-201ENST00000374733 GSE1Q14687 1217 aa16.46■□□□□ 0.23
ABCA1-201ENST00000374733 RASEFQ8IZ41 740 aa16.46■□□□□ 0.23
ABCA1-201ENST00000374733 CASZ1Q86V15 1759 aa16.46■□□□□ 0.22
ABCA1-201ENST00000374733 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
ABCA1-201ENST00000374733 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
ABCA1-201ENST00000374733 CD44P16070 742 aaKnown RBP16.44■□□□□ 0.22
ABCA1-201ENST00000374733 IFT172Q9UG01 1749 aa16.44■□□□□ 0.22
ABCA1-201ENST00000374733 PSME1Q06323 249 aa16.43■□□□□ 0.22
ABCA1-201ENST00000374733 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
ABCA1-201ENST00000374733 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
ABCA1-201ENST00000374733 SBNO1A3KN83 1393 aa16.41■□□□□ 0.22
ABCA1-201ENST00000374733 VGFO15240 615 aaPredicted RBP16.41■□□□□ 0.22
ABCA1-201ENST00000374733 PPLO60437 1756 aa16.41■□□□□ 0.22
ABCA1-201ENST00000374733 RRBP1Q9P2E9 1410 aaKnown RBP16.4■□□□□ 0.22
ABCA1-201ENST00000374733 PLEKHH1Q9ULM0 1364 aa16.39■□□□□ 0.21
ABCA1-201ENST00000374733 TSPYL2Q9H2G4 693 aaPredicted RBP16.39■□□□□ 0.21
ABCA1-201ENST00000374733 STK26Q9P289 416 aa16.39■□□□□ 0.21
ABCA1-201ENST00000374733 PHF8Q9UPP1 1060 aa16.39■□□□□ 0.21
ABCA1-201ENST00000374733 NRXN1Q9ULB1 1477 aa16.38■□□□□ 0.21
ABCA1-201ENST00000374733 ZBTB7AO95365 584 aa16.38■□□□□ 0.21
ABCA1-201ENST00000374733 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
ABCA1-201ENST00000374733 KNDC1Q76NI1 1749 aa16.38■□□□□ 0.21
ABCA1-201ENST00000374733 TRPM3Q9HCF6 1732 aaPredicted RBP16.36■□□□□ 0.21
ABCA1-201ENST00000374733 GOLGB1Q14789 3259 aaKnown RBP16.36■□□□□ 0.21
ABCA1-201ENST00000374733 AMER1Q5JTC6 1135 aaPredicted RBP16.36■□□□□ 0.21
ABCA1-201ENST00000374733 FHDC1Q9C0D6 1143 aaPredicted RBP16.36■□□□□ 0.21
ABCA1-201ENST00000374733 PDGFDQ9GZP0 370 aaPredicted RBP16.36■□□□□ 0.21
ABCA1-201ENST00000374733 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
ABCA1-201ENST00000374733 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
ABCA1-201ENST00000374733 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
ABCA1-201ENST00000374733 ALS2Q96Q42 1657 aa16.35■□□□□ 0.21
ABCA1-201ENST00000374733 SYT17Q9BSW7 474 aa16.35■□□□□ 0.21
ABCA1-201ENST00000374733 ANO8Q9HCE9 1232 aaPredicted RBP16.35■□□□□ 0.21
ABCA1-201ENST00000374733 RGPD3A6NKT7 1758 aaPredicted RBP16.35■□□□□ 0.21
ABCA1-201ENST00000374733 RGPD4Q7Z3J3 1758 aa16.35■□□□□ 0.21
ABCA1-201ENST00000374733 TECPR2O15040 1411 aa16.35■□□□□ 0.21
ABCA1-201ENST00000374733 PTGER2P43116 358 aa16.34■□□□□ 0.21
ABCA1-201ENST00000374733 PDE3BQ13370 1112 aa16.34■□□□□ 0.21
ABCA1-201ENST00000374733 ROCK1Q13464 1354 aa16.32■□□□□ 0.2
ABCA1-201ENST00000374733 SHANK3Q9BYB0 1731 aa16.32■□□□□ 0.2
ABCA1-201ENST00000374733 PRDM11Q9NQV5 511 aa16.32■□□□□ 0.2
ABCA1-201ENST00000374733 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
ABCA1-201ENST00000374733 USP35Q9P2H5 1018 aa16.32■□□□□ 0.2
ABCA1-201ENST00000374733 PMFBP1Q8TBY8 1022 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms