RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 TOM1O60784 492 aa19.25■□□□□ 0.67
TCEA3-201ENST00000374601 AMER1Q5JTC6 1135 aaPredicted RBP19.25■□□□□ 0.67
TCEA3-201ENST00000374601 DIEXFQ68CQ4 756 aaKnown RBP19.25■□□□□ 0.67
TCEA3-201ENST00000374601 DDX17Q92841 729 aaKnown RBP19.25■□□□□ 0.67
TCEA3-201ENST00000374601 CRYBG1Q9Y4K1 1723 aa19.25■□□□□ 0.67
TCEA3-201ENST00000374601 COL16A1Q07092 1604 aaPredicted RBP19.25■□□□□ 0.67
TCEA3-201ENST00000374601 BRD4O60885 1362 aaPredicted RBP19.24■□□□□ 0.67
TCEA3-201ENST00000374601 NPC1L1Q9UHC9 1359 aa19.24■□□□□ 0.67
TCEA3-201ENST00000374601 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
TCEA3-201ENST00000374601 NPHP3Q7Z494 1330 aa19.24■□□□□ 0.67
TCEA3-201ENST00000374601 TTC21BQ7Z4L5 1316 aa19.24■□□□□ 0.67
TCEA3-201ENST00000374601 XPCQ01831 940 aaPredicted RBP19.23■□□□□ 0.67
TCEA3-201ENST00000374601 CGNL1Q0VF96 1302 aa19.23■□□□□ 0.67
TCEA3-201ENST00000374601 PSME1Q06323 249 aa19.22■□□□□ 0.67
TCEA3-201ENST00000374601 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.22■□□□□ 0.67
TCEA3-201ENST00000374601 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
TCEA3-201ENST00000374601 TTC21AQ8NDW8 1320 aa19.22■□□□□ 0.67
TCEA3-201ENST00000374601 NSD2O96028 1365 aa19.21■□□□□ 0.67
TCEA3-201ENST00000374601 KRT28Q7Z3Y7 464 aa19.21■□□□□ 0.67
TCEA3-201ENST00000374601 ABCA3Q99758 1704 aa19.21■□□□□ 0.67
TCEA3-201ENST00000374601 SOS2Q07890 1332 aaPredicted RBP19.21■□□□□ 0.67
TCEA3-201ENST00000374601 SBNO1A3KN83 1393 aa19.2■□□□□ 0.66
TCEA3-201ENST00000374601 TNS3Q68CZ2 1445 aa19.2■□□□□ 0.66
TCEA3-201ENST00000374601 NME9Q86XW9 330 aa19.2■□□□□ 0.66
TCEA3-201ENST00000374601 OVOS2A0A0J9YW53 1432 aa19.19■□□□□ 0.66
TCEA3-201ENST00000374601 OVOS2Q6IE36 1432 aa19.19■□□□□ 0.66
TCEA3-201ENST00000374601 PHRF1Q9P1Y6 1649 aaKnown RBP19.19■□□□□ 0.66
TCEA3-201ENST00000374601 FYB1O15117 783 aa19.19■□□□□ 0.66
TCEA3-201ENST00000374601 PIP4K2BP78356 416 aa19.19■□□□□ 0.66
TCEA3-201ENST00000374601 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
TCEA3-201ENST00000374601 PARD3Q8TEW0 1356 aa19.19■□□□□ 0.66
TCEA3-201ENST00000374601 CC2D1BQ5T0F9 858 aaKnown RBP19.18■□□□□ 0.66
TCEA3-201ENST00000374601 MAP2P11137 1827 aaKnown RBP19.17■□□□□ 0.66
TCEA3-201ENST00000374601 ZRANB1Q9UGI0 708 aa19.17■□□□□ 0.66
TCEA3-201ENST00000374601 COL22A1Q8NFW1 1626 aaPredicted RBP19.17■□□□□ 0.66
TCEA3-201ENST00000374601 USP31Q70CQ4 1352 aa19.17■□□□□ 0.66
TCEA3-201ENST00000374601 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
TCEA3-201ENST00000374601 SLIT3O75094 1523 aa19.15■□□□□ 0.66
TCEA3-201ENST00000374601 PAK3O75914 559 aaPredicted RBP19.15■□□□□ 0.66
TCEA3-201ENST00000374601 CNGB1Q14028 1251 aaPredicted RBP19.15■□□□□ 0.66
TCEA3-201ENST00000374601 SCAF1Q9H7N4 1312 aaKnown RBP19.15■□□□□ 0.66
TCEA3-201ENST00000374601 LTN1O94822 1766 aa19.14■□□□□ 0.66
TCEA3-201ENST00000374601 SPATA31A3Q5VYP0 1347 aa19.14■□□□□ 0.65
TCEA3-201ENST00000374601 PRKRIP1Q9H875 184 aaPredicted RBP19.13■□□□□ 0.65
TCEA3-201ENST00000374601 SHPRHQ149N8 1683 aa19.13■□□□□ 0.65
TCEA3-201ENST00000374601 NFAT5O94916 1531 aa19.12■□□□□ 0.65
TCEA3-201ENST00000374601 ABTB2Q8N961 1025 aa19.12■□□□□ 0.65
TCEA3-201ENST00000374601 ARHGEF10O15013 1369 aa19.11■□□□□ 0.65
TCEA3-201ENST00000374601 ANP32CO43423 234 aa19.11■□□□□ 0.65
TCEA3-201ENST00000374601 NUTM2GQ5VZR2 741 aa19.11■□□□□ 0.65
TCEA3-201ENST00000374601 PEAK1Q9H792 1746 aa19.09■□□□□ 0.65
TCEA3-201ENST00000374601 USP19O94966 1318 aa19.09■□□□□ 0.65
TCEA3-201ENST00000374601 NLRP6P59044 892 aa19.09■□□□□ 0.65
TCEA3-201ENST00000374601 RALBP1Q15311 655 aa19.09■□□□□ 0.65
TCEA3-201ENST00000374601 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
TCEA3-201ENST00000374601 COG3Q96JB2 828 aa19.09■□□□□ 0.65
TCEA3-201ENST00000374601 PNPLA6Q8IY17 1366 aa19.07■□□□□ 0.64
TCEA3-201ENST00000374601 LMOD2Q6P5Q4 547 aa19.07■□□□□ 0.64
TCEA3-201ENST00000374601 MIER1Q8N108 512 aa19.07■□□□□ 0.64
TCEA3-201ENST00000374601 NLRP13Q86W25 1043 aa19.06■□□□□ 0.64
TCEA3-201ENST00000374601 SMG6Q86US8 1419 aaKnown RBP19.06■□□□□ 0.64
TCEA3-201ENST00000374601 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
TCEA3-201ENST00000374601 LRRC59Q96AG4 307 aaKnown RBP19.05■□□□□ 0.64
TCEA3-201ENST00000374601 AATKQ6ZMQ8 1374 aa19.05■□□□□ 0.64
TCEA3-201ENST00000374601 MYBBP1AQ9BQG0 1328 aaKnown RBP19.04■□□□□ 0.64
TCEA3-201ENST00000374601 RGPD5Q99666 1765 aa19.04■□□□□ 0.64
TCEA3-201ENST00000374601 PPP2R1AP30153 589 aa19.04■□□□□ 0.64
TCEA3-201ENST00000374601 COL18A1P39060 1754 aa19.04■□□□□ 0.64
TCEA3-201ENST00000374601 FBLN1P23142 703 aa19.03■□□□□ 0.64
TCEA3-201ENST00000374601 HSPA1LP34931 641 aa19.01■□□□□ 0.63
TCEA3-201ENST00000374601 CABLES1Q8TDN4 633 aa19.01■□□□□ 0.63
TCEA3-201ENST00000374601 CDK12Q9NYV4 1490 aaPredicted RBP19.01■□□□□ 0.63
TCEA3-201ENST00000374601 SOX12O15370 315 aa19■□□□□ 0.63
TCEA3-201ENST00000374601 PLEKHG5O94827 1062 aa19■□□□□ 0.63
TCEA3-201ENST00000374601 COL3A1P02461 1466 aaPredicted RBP19■□□□□ 0.63
TCEA3-201ENST00000374601 SOCS7O14512 581 aa18.99■□□□□ 0.63
TCEA3-201ENST00000374601 LMO7Q8WWI1 1683 aa18.98■□□□□ 0.63
TCEA3-201ENST00000374601 GCP02774 474 aa18.98■□□□□ 0.63
TCEA3-201ENST00000374601 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
TCEA3-201ENST00000374601 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
TCEA3-201ENST00000374601 POLKQ9UBT6 870 aa18.98■□□□□ 0.63
TCEA3-201ENST00000374601 ABCC6O95255 1503 aa18.98■□□□□ 0.63
TCEA3-201ENST00000374601 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
TCEA3-201ENST00000374601 JCADQ9P266 1359 aa18.97■□□□□ 0.63
TCEA3-201ENST00000374601 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
TCEA3-201ENST00000374601 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
TCEA3-201ENST00000374601 PLCH1Q4KWH8 1693 aa18.96■□□□□ 0.63
TCEA3-201ENST00000374601 MTHFSP49914 203 aa18.96■□□□□ 0.63
TCEA3-201ENST00000374601 CPDO75976 1380 aa18.95■□□□□ 0.62
TCEA3-201ENST00000374601 RGPD2P0DJD1 1756 aa18.95■□□□□ 0.62
TCEA3-201ENST00000374601 COL14A1Q05707 1796 aaKnown RBP18.95■□□□□ 0.62
TCEA3-201ENST00000374601 RTL1A6NKG5 1358 aa18.94■□□□□ 0.62
TCEA3-201ENST00000374601 CCER2I3L3R5 266 aa18.94■□□□□ 0.62
TCEA3-201ENST00000374601 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
TCEA3-201ENST00000374601 KIF24Q5T7B8 1368 aa18.93■□□□□ 0.62
TCEA3-201ENST00000374601 ARHGEF25Q86VW2 580 aa18.93■□□□□ 0.62
TCEA3-201ENST00000374601 INSRP06213 1382 aa18.93■□□□□ 0.62
TCEA3-201ENST00000374601 FLT4P35916 1363 aa18.93■□□□□ 0.62
TCEA3-201ENST00000374601 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
TCEA3-201ENST00000374601 LRP6O75581 1613 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms