RNA–Protein interactions for RNA: ENST00000374459.5

RASGEF1A-202, Transcript of RasGEF domain family member 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RASGEF1A, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1A-202ENST00000374459 STK26Q9P289 416 aa18.46■□□□□ 0.55
RASGEF1A-202ENST00000374459 TNNQ9UQP3 1299 aa18.46■□□□□ 0.55
RASGEF1A-202ENST00000374459 NSD2O96028 1365 aa18.45■□□□□ 0.54
RASGEF1A-202ENST00000374459 NLRP1Q9C000 1473 aa18.45■□□□□ 0.54
RASGEF1A-202ENST00000374459 PRAM1Q96QH2 718 aa18.45■□□□□ 0.54
RASGEF1A-202ENST00000374459 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
RASGEF1A-202ENST00000374459 A0A1W2PP64 1363 aa18.44■□□□□ 0.54
RASGEF1A-202ENST00000374459 RLBP1P12271 317 aa18.44■□□□□ 0.54
RASGEF1A-202ENST00000374459 ABCC11Q96J66 1382 aa18.44■□□□□ 0.54
RASGEF1A-202ENST00000374459 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
RASGEF1A-202ENST00000374459 PMFBP1Q8TBY8 1022 aa18.43■□□□□ 0.54
RASGEF1A-202ENST00000374459 PCDHB15Q9Y5E8 787 aa18.43■□□□□ 0.54
RASGEF1A-202ENST00000374459 KIF20BQ96Q89 1820 aa18.43■□□□□ 0.54
RASGEF1A-202ENST00000374459 MTHFSP49914 203 aa18.43■□□□□ 0.54
RASGEF1A-202ENST00000374459 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
RASGEF1A-202ENST00000374459 ATAD2Q6PL18 1390 aa18.43■□□□□ 0.54
RASGEF1A-202ENST00000374459 TNRQ92752 1358 aa18.43■□□□□ 0.54
RASGEF1A-202ENST00000374459 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
RASGEF1A-202ENST00000374459 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
RASGEF1A-202ENST00000374459 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
RASGEF1A-202ENST00000374459 MED14O60244 1454 aa18.42■□□□□ 0.54
RASGEF1A-202ENST00000374459 C3P01024 1663 aa18.42■□□□□ 0.54
RASGEF1A-202ENST00000374459 CPS1P31327 1500 aa18.41■□□□□ 0.54
RASGEF1A-202ENST00000374459 TECPR2O15040 1411 aa18.4■□□□□ 0.54
RASGEF1A-202ENST00000374459 CFAP53Q96M91 514 aa18.4■□□□□ 0.54
RASGEF1A-202ENST00000374459 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
RASGEF1A-202ENST00000374459 AAMPQ13685 434 aa18.4■□□□□ 0.54
RASGEF1A-202ENST00000374459 METP08581 1390 aa18.39■□□□□ 0.53
RASGEF1A-202ENST00000374459 BECN1Q14457 450 aa18.39■□□□□ 0.53
RASGEF1A-202ENST00000374459 PDZRN3Q9UPQ7 1066 aa18.39■□□□□ 0.53
RASGEF1A-202ENST00000374459 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
RASGEF1A-202ENST00000374459 FER1L4A9Z1Z3 1794 aa18.37■□□□□ 0.53
RASGEF1A-202ENST00000374459 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
RASGEF1A-202ENST00000374459 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.37■□□□□ 0.53
RASGEF1A-202ENST00000374459 TMEM2Q9UHN6 1383 aa18.37■□□□□ 0.53
RASGEF1A-202ENST00000374459 SLKQ9H2G2 1235 aaPredicted RBP18.36■□□□□ 0.53
RASGEF1A-202ENST00000374459 POGKQ9P215 609 aa18.36■□□□□ 0.53
RASGEF1A-202ENST00000374459 SRPK2P78362 688 aaKnown RBP18.36■□□□□ 0.53
RASGEF1A-202ENST00000374459 MYH16Q9H6N6 1097 aa18.36■□□□□ 0.53
RASGEF1A-202ENST00000374459 CDK19Q9BWU1 502 aa18.35■□□□□ 0.53
RASGEF1A-202ENST00000374459 ADGRB2O60241 1585 aa18.35■□□□□ 0.53
RASGEF1A-202ENST00000374459 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
RASGEF1A-202ENST00000374459 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
RASGEF1A-202ENST00000374459 ATP7BP35670 1465 aa18.35■□□□□ 0.53
RASGEF1A-202ENST00000374459 FAM135BQ49AJ0 1406 aa18.35■□□□□ 0.53
RASGEF1A-202ENST00000374459 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
RASGEF1A-202ENST00000374459 RWDD1Q9H446 243 aaPredicted RBP18.34■□□□□ 0.53
RASGEF1A-202ENST00000374459 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
RASGEF1A-202ENST00000374459 WAPLQ7Z5K2 1190 aa18.33■□□□□ 0.53
RASGEF1A-202ENST00000374459 TBC1D32Q96NH3 1257 aa18.33■□□□□ 0.53
RASGEF1A-202ENST00000374459 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.53
RASGEF1A-202ENST00000374459 MVPQ14764 893 aaKnown RBP18.33■□□□□ 0.52
RASGEF1A-202ENST00000374459 MON2Q7Z3U7 1717 aa18.33■□□□□ 0.52
RASGEF1A-202ENST00000374459 AKAP12Q02952 1782 aa18.33■□□□□ 0.52
RASGEF1A-202ENST00000374459 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
RASGEF1A-202ENST00000374459 SLIT1O75093 1534 aa18.31■□□□□ 0.52
RASGEF1A-202ENST00000374459 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
RASGEF1A-202ENST00000374459 ARHGAP23Q9P227 1491 aa18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 FYB1O15117 783 aa18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 FTSJ3Q8IY81 847 aaKnown RBP18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 VSIG10Q8N0Z9 540 aa18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
RASGEF1A-202ENST00000374459 TERF2IPQ9NYB0 399 aa18.29■□□□□ 0.52
RASGEF1A-202ENST00000374459 TOPAZ1Q8N9V7 1692 aa18.29■□□□□ 0.52
RASGEF1A-202ENST00000374459 DZIP1LQ8IYY4 767 aaKnown RBP18.29■□□□□ 0.52
RASGEF1A-202ENST00000374459 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
RASGEF1A-202ENST00000374459 ZMYND15Q9H091 742 aa18.29■□□□□ 0.52
RASGEF1A-202ENST00000374459 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
RASGEF1A-202ENST00000374459 CDC42BPGQ6DT37 1551 aa18.29■□□□□ 0.52
RASGEF1A-202ENST00000374459 CABP1Q9NZU7 370 aa18.27■□□□□ 0.52
RASGEF1A-202ENST00000374459 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.51
RASGEF1A-202ENST00000374459 ITSN1Q15811 1721 aa18.26■□□□□ 0.51
RASGEF1A-202ENST00000374459 EXOSC9Q06265 439 aaKnown RBP18.26■□□□□ 0.51
RASGEF1A-202ENST00000374459 PNPLA6Q8IY17 1366 aa18.26■□□□□ 0.51
RASGEF1A-202ENST00000374459 U2SURPO15042 1029 aaKnown RBP18.25■□□□□ 0.51
RASGEF1A-202ENST00000374459 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
RASGEF1A-202ENST00000374459 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
RASGEF1A-202ENST00000374459 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
RASGEF1A-202ENST00000374459 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
RASGEF1A-202ENST00000374459 LTKP29376 864 aa18.25■□□□□ 0.51
RASGEF1A-202ENST00000374459 ROBO2Q9HCK4 1378 aa18.24■□□□□ 0.51
RASGEF1A-202ENST00000374459 NRKQ7Z2Y5 1582 aa18.24■□□□□ 0.51
RASGEF1A-202ENST00000374459 TRIM27P14373 513 aa18.24■□□□□ 0.51
RASGEF1A-202ENST00000374459 MAP2P11137 1827 aaKnown RBP18.24■□□□□ 0.51
RASGEF1A-202ENST00000374459 PLEKHF1Q96S99 279 aa18.24■□□□□ 0.51
RASGEF1A-202ENST00000374459 TMPOP42166 694 aaKnown RBP18.24■□□□□ 0.51
RASGEF1A-202ENST00000374459 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
RASGEF1A-202ENST00000374459 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
RASGEF1A-202ENST00000374459 CEBPAP49715 358 aaPredicted RBP18.23■□□□□ 0.51
RASGEF1A-202ENST00000374459 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
RASGEF1A-202ENST00000374459 PPIP5K1Q6PFW1 1433 aa18.23■□□□□ 0.51
RASGEF1A-202ENST00000374459 SSH1Q8WYL5 1049 aa18.23■□□□□ 0.51
RASGEF1A-202ENST00000374459 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
RASGEF1A-202ENST00000374459 ITPRIPQ8IWB1 547 aa18.22■□□□□ 0.51
RASGEF1A-202ENST00000374459 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
RASGEF1A-202ENST00000374459 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms