RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 RAPGEF3O95398 923 aa16.8■□□□□ 0.28
SNX12-202ENST00000374274 KIF1BO60333 1816 aa16.8■□□□□ 0.28
SNX12-202ENST00000374274 RLBP1P12271 317 aa16.8■□□□□ 0.28
SNX12-202ENST00000374274 MSNP26038 577 aaKnown RBP16.79■□□□□ 0.28
SNX12-202ENST00000374274 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
SNX12-202ENST00000374274 PRDM4Q9UKN5 801 aa16.79■□□□□ 0.28
SNX12-202ENST00000374274 RUNDC1Q96C34 613 aa16.78■□□□□ 0.28
SNX12-202ENST00000374274 UGGT1Q9NYU2 1555 aa16.78■□□□□ 0.28
SNX12-202ENST00000374274 DIP2CQ9Y2E4 1556 aa16.78■□□□□ 0.28
SNX12-202ENST00000374274 GOLGA6L22H0YM25 854 aa16.77■□□□□ 0.28
SNX12-202ENST00000374274 GGT6Q6P531 493 aa16.77■□□□□ 0.27
SNX12-202ENST00000374274 ZNF500O60304 480 aaPredicted RBP16.76■□□□□ 0.27
SNX12-202ENST00000374274 KLHL40Q2TBA0 621 aa16.76■□□□□ 0.27
SNX12-202ENST00000374274 RIPK4P57078 832 aa16.75■□□□□ 0.27
SNX12-202ENST00000374274 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
SNX12-202ENST00000374274 DIP2BQ9P265 1576 aa16.74■□□□□ 0.27
SNX12-202ENST00000374274 SMAP1Q8IYB5 467 aaPredicted RBP16.74■□□□□ 0.27
SNX12-202ENST00000374274 ABCC3O15438 1527 aa16.74■□□□□ 0.27
SNX12-202ENST00000374274 NPATQ14207 1427 aa16.74■□□□□ 0.27
SNX12-202ENST00000374274 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
SNX12-202ENST00000374274 TRHP20396 242 aaPredicted RBP16.74■□□□□ 0.27
SNX12-202ENST00000374274 ZNF445P59923 1031 aa16.74■□□□□ 0.27
SNX12-202ENST00000374274 KIF16BQ96L93 1317 aa16.74■□□□□ 0.27
SNX12-202ENST00000374274 MYOM2P54296 1465 aa16.73■□□□□ 0.27
SNX12-202ENST00000374274 MCM5P33992 734 aa16.73■□□□□ 0.27
SNX12-202ENST00000374274 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
SNX12-202ENST00000374274 IFT172Q9UG01 1749 aa16.73■□□□□ 0.27
SNX12-202ENST00000374274 DZIP1LQ8IYY4 767 aaKnown RBP16.73■□□□□ 0.27
SNX12-202ENST00000374274 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
SNX12-202ENST00000374274 NOL7Q9UMY1 257 aaKnown RBP16.73■□□□□ 0.27
SNX12-202ENST00000374274 REREQ9P2R6 1566 aa16.73■□□□□ 0.27
SNX12-202ENST00000374274 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
SNX12-202ENST00000374274 CSPP1Q1MSJ5 1256 aa16.72■□□□□ 0.27
SNX12-202ENST00000374274 CFAP65Q6ZU64 1925 aaKnown RBP16.72■□□□□ 0.27
SNX12-202ENST00000374274 CAMSAP1Q5T5Y3 1602 aa16.72■□□□□ 0.27
SNX12-202ENST00000374274 MYO3AQ8NEV4 1616 aa16.72■□□□□ 0.27
SNX12-202ENST00000374274 DDX19BQ9UMR2 479 aa16.72■□□□□ 0.27
SNX12-202ENST00000374274 SBNO2Q9Y2G9 1366 aa16.72■□□□□ 0.27
SNX12-202ENST00000374274 USP32Q8NFA0 1604 aa16.71■□□□□ 0.27
SNX12-202ENST00000374274 FAM69CQ0P6D2 419 aa16.71■□□□□ 0.27
SNX12-202ENST00000374274 DYNC1I1O14576 645 aa16.71■□□□□ 0.26
SNX12-202ENST00000374274 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.26
SNX12-202ENST00000374274 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
SNX12-202ENST00000374274 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
SNX12-202ENST00000374274 PDLIM2Q96JY6 352 aa16.7■□□□□ 0.26
SNX12-202ENST00000374274 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
SNX12-202ENST00000374274 K7ELQ4 463 aaPredicted RBP16.69■□□□□ 0.26
SNX12-202ENST00000374274 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
SNX12-202ENST00000374274 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
SNX12-202ENST00000374274 ZC3H13Q5T200 1668 aaKnown RBP16.68■□□□□ 0.26
SNX12-202ENST00000374274 TSPOAP1O95153 1857 aa16.68■□□□□ 0.26
SNX12-202ENST00000374274 BMP2KLQ5H9B9 411 aa16.67■□□□□ 0.26
SNX12-202ENST00000374274 NUCB1Q02818 461 aa16.67■□□□□ 0.26
SNX12-202ENST00000374274 CARD14Q9BXL6 1004 aa16.67■□□□□ 0.26
SNX12-202ENST00000374274 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
SNX12-202ENST00000374274 NRXN1Q9ULB1 1477 aa16.66■□□□□ 0.26
SNX12-202ENST00000374274 KIF2CQ99661 725 aa16.66■□□□□ 0.26
SNX12-202ENST00000374274 SIGLEC1Q9BZZ2 1709 aa16.65■□□□□ 0.26
SNX12-202ENST00000374274 DDX49Q9Y6V7 483 aaKnown RBP16.65■□□□□ 0.26
SNX12-202ENST00000374274 NOS1P29475 1434 aa16.65■□□□□ 0.26
SNX12-202ENST00000374274 PPLO60437 1756 aa16.65■□□□□ 0.26
SNX12-202ENST00000374274 BAG4O95429 457 aaKnown RBP16.64■□□□□ 0.25
SNX12-202ENST00000374274 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
SNX12-202ENST00000374274 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.25
SNX12-202ENST00000374274 R3HCC1Q9Y3T6 440 aaKnown RBP16.64■□□□□ 0.25
SNX12-202ENST00000374274 UQCRHLA0A096LP55 91 aa16.64■□□□□ 0.25
SNX12-202ENST00000374274 UQCRHP07919 91 aa16.64■□□□□ 0.25
SNX12-202ENST00000374274 CFAP70Q5T0N1 1121 aa16.64■□□□□ 0.25
SNX12-202ENST00000374274 ZKSCAN5Q9Y2L8 839 aa16.64■□□□□ 0.25
SNX12-202ENST00000374274 BCL2L13Q9BXK5 485 aa16.63■□□□□ 0.25
SNX12-202ENST00000374274 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
SNX12-202ENST00000374274 PIK3C2BO00750 1634 aa16.63■□□□□ 0.25
SNX12-202ENST00000374274 NUCB2P80303 420 aa16.63■□□□□ 0.25
SNX12-202ENST00000374274 CFAP44Q96MT7 982 aa16.63■□□□□ 0.25
SNX12-202ENST00000374274 ABCC11Q96J66 1382 aa16.62■□□□□ 0.25
SNX12-202ENST00000374274 RBM10P98175 930 aaKnown RBP16.62■□□□□ 0.25
SNX12-202ENST00000374274 SASS6Q6UVJ0 657 aa16.62■□□□□ 0.25
SNX12-202ENST00000374274 TRIM27P14373 513 aa16.62■□□□□ 0.25
SNX12-202ENST00000374274 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
SNX12-202ENST00000374274 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
SNX12-202ENST00000374274 ZBTB40Q9NUA8 1239 aa16.62■□□□□ 0.25
SNX12-202ENST00000374274 SSFA2P28290 1259 aa16.61■□□□□ 0.25
SNX12-202ENST00000374274 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
SNX12-202ENST00000374274 RPGRIP1LQ68CZ1 1315 aa16.6■□□□□ 0.25
SNX12-202ENST00000374274 CHD1LQ86WJ1 897 aa16.6■□□□□ 0.25
SNX12-202ENST00000374274 CCDC39Q9UFE4 941 aa16.6■□□□□ 0.25
SNX12-202ENST00000374274 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
SNX12-202ENST00000374274 ZSCAN23Q3MJ62 389 aa16.59■□□□□ 0.25
SNX12-202ENST00000374274 MORC1Q86VD1 984 aa16.59■□□□□ 0.25
SNX12-202ENST00000374274 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
SNX12-202ENST00000374274 IL16Q14005 1332 aa16.59■□□□□ 0.25
SNX12-202ENST00000374274 SETBP1Q9Y6X0 1596 aa16.59■□□□□ 0.25
SNX12-202ENST00000374274 SMC4Q9NTJ3 1288 aa16.59■□□□□ 0.25
SNX12-202ENST00000374274 NSD3Q9BZ95 1437 aa16.59■□□□□ 0.25
SNX12-202ENST00000374274 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.25
SNX12-202ENST00000374274 ITPRIPQ8IWB1 547 aa16.58■□□□□ 0.25
SNX12-202ENST00000374274 CHMP4BQ9H444 224 aaKnown RBP16.58■□□□□ 0.25
SNX12-202ENST00000374274 NSD2O96028 1365 aa16.58■□□□□ 0.24
SNX12-202ENST00000374274 MED14O60244 1454 aa16.58■□□□□ 0.24
SNX12-202ENST00000374274 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms