RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 PAK3O75914 559 aaPredicted RBP19.16■□□□□ 0.66
TRAPPC3-201ENST00000373159 SPATA31A5Q5VU36 1347 aa19.16■□□□□ 0.66
TRAPPC3-201ENST00000373159 SPATA31A7Q8IWB4 1347 aa19.16■□□□□ 0.66
TRAPPC3-201ENST00000373159 BAG6P46379 1132 aa19.15■□□□□ 0.66
TRAPPC3-201ENST00000373159 NUDT16Q96DE0 195 aaKnown RBP19.15■□□□□ 0.66
TRAPPC3-201ENST00000373159 ABCA3Q99758 1704 aa19.14■□□□□ 0.66
TRAPPC3-201ENST00000373159 TRPM3Q9HCF6 1732 aaPredicted RBP19.14■□□□□ 0.66
TRAPPC3-201ENST00000373159 PRDM11Q9NQV5 511 aa19.13■□□□□ 0.65
TRAPPC3-201ENST00000373159 ALS2Q96Q42 1657 aa19.12■□□□□ 0.65
TRAPPC3-201ENST00000373159 CDK19Q9BWU1 502 aa19.11■□□□□ 0.65
TRAPPC3-201ENST00000373159 COL14A1Q05707 1796 aaKnown RBP19.11■□□□□ 0.65
TRAPPC3-201ENST00000373159 NRAPQ86VF7 1730 aa19.09■□□□□ 0.65
TRAPPC3-201ENST00000373159 CCDC61Q9Y6R9 512 aa19.09■□□□□ 0.65
TRAPPC3-201ENST00000373159 SPATA31A1Q5TZJ5 1347 aa19.08■□□□□ 0.65
TRAPPC3-201ENST00000373159 EN1Q05925 392 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC3-201ENST00000373159 NBPF8Q3BBV2 869 aa19.08■□□□□ 0.64
TRAPPC3-201ENST00000373159 FAM182BQ5T319 152 aa19.08■□□□□ 0.64
TRAPPC3-201ENST00000373159 ATP7BP35670 1465 aa19.08■□□□□ 0.64
TRAPPC3-201ENST00000373159 KIAA0232Q92628 1395 aa19.07■□□□□ 0.64
TRAPPC3-201ENST00000373159 PLEKHG3A1L390 1219 aa19.07■□□□□ 0.64
TRAPPC3-201ENST00000373159 POLR3AO14802 1390 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-201ENST00000373159 PSDA5PKW4 1024 aaPredicted RBP19.06■□□□□ 0.64
TRAPPC3-201ENST00000373159 CHRNA2Q15822 529 aa19.06■□□□□ 0.64
TRAPPC3-201ENST00000373159 ACEP12821 1306 aa19.05■□□□□ 0.64
TRAPPC3-201ENST00000373159 ZC3H6P61129 1189 aaKnown RBP19.05■□□□□ 0.64
TRAPPC3-201ENST00000373159 FAM196AQ6ZSG2 479 aa19.04■□□□□ 0.64
TRAPPC3-201ENST00000373159 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
TRAPPC3-201ENST00000373159 DISP2A7MBM2 1401 aa19.03■□□□□ 0.64
TRAPPC3-201ENST00000373159 NUTM2GQ5VZR2 741 aa19.03■□□□□ 0.64
TRAPPC3-201ENST00000373159 EVA1CP58658 441 aa19.02■□□□□ 0.64
TRAPPC3-201ENST00000373159 BARGINQ6ZT62 677 aa19.02■□□□□ 0.64
TRAPPC3-201ENST00000373159 CRYBG1Q9Y4K1 1723 aa19.02■□□□□ 0.63
TRAPPC3-201ENST00000373159 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
TRAPPC3-201ENST00000373159 ABTB2Q8N961 1025 aa19.01■□□□□ 0.63
TRAPPC3-201ENST00000373159 ARHGEF28Q8N1W1 1705 aaKnown RBP19■□□□□ 0.63
TRAPPC3-201ENST00000373159 CAMKK2Q96RR4 588 aa19■□□□□ 0.63
TRAPPC3-201ENST00000373159 THSD7AQ9UPZ6 1657 aa19■□□□□ 0.63
TRAPPC3-201ENST00000373159 TRIM37O94972 964 aa18.99■□□□□ 0.63
TRAPPC3-201ENST00000373159 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-201ENST00000373159 EZH2Q15910 746 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-201ENST00000373159 LRP5O75197 1615 aa18.99■□□□□ 0.63
TRAPPC3-201ENST00000373159 CPDO75976 1380 aa18.98■□□□□ 0.63
TRAPPC3-201ENST00000373159 ITSN1Q15811 1721 aa18.98■□□□□ 0.63
TRAPPC3-201ENST00000373159 NLRP13Q86W25 1043 aa18.98■□□□□ 0.63
TRAPPC3-201ENST00000373159 USP35Q9P2H5 1018 aa18.98■□□□□ 0.63
TRAPPC3-201ENST00000373159 USP19O94966 1318 aa18.98■□□□□ 0.63
TRAPPC3-201ENST00000373159 PDE3BQ13370 1112 aa18.97■□□□□ 0.63
TRAPPC3-201ENST00000373159 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
TRAPPC3-201ENST00000373159 APBA3O96018 575 aa18.96■□□□□ 0.63
TRAPPC3-201ENST00000373159 GCP02774 474 aa18.96■□□□□ 0.63
TRAPPC3-201ENST00000373159 SRPK2P78362 688 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-201ENST00000373159 LARP1Q6PKG0 1096 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-201ENST00000373159 TCP11L2Q8N4U5 519 aa18.96■□□□□ 0.63
TRAPPC3-201ENST00000373159 RGPD1P0DJD0 1748 aa18.96■□□□□ 0.63
TRAPPC3-201ENST00000373159 THRAP3Q9Y2W1 955 aaKnown RBP18.95■□□□□ 0.62
TRAPPC3-201ENST00000373159 CENPJQ9HC77 1338 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC3-201ENST00000373159 BRD4O60885 1362 aaPredicted RBP18.94■□□□□ 0.62
TRAPPC3-201ENST00000373159 PARD3Q8TEW0 1356 aa18.94■□□□□ 0.62
TRAPPC3-201ENST00000373159 CABP2Q9NPB3 220 aa18.94■□□□□ 0.62
TRAPPC3-201ENST00000373159 CAMTA1Q9Y6Y1 1673 aa18.94■□□□□ 0.62
TRAPPC3-201ENST00000373159 KIAA1210Q9ULL0 1709 aa18.93■□□□□ 0.62
TRAPPC3-201ENST00000373159 PHRF1Q9P1Y6 1649 aaKnown RBP18.92■□□□□ 0.62
TRAPPC3-201ENST00000373159 PPIP5K1Q6PFW1 1433 aa18.92■□□□□ 0.62
TRAPPC3-201ENST00000373159 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
TRAPPC3-201ENST00000373159 C11orf95C9JLR9 678 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC3-201ENST00000373159 CABP1Q9NZU7 370 aa18.9■□□□□ 0.62
TRAPPC3-201ENST00000373159 NLRP6P59044 892 aa18.89■□□□□ 0.61
TRAPPC3-201ENST00000373159 NRKQ7Z2Y5 1582 aa18.89■□□□□ 0.61
TRAPPC3-201ENST00000373159 TNS1Q9HBL0 1735 aaKnown RBP18.88■□□□□ 0.61
TRAPPC3-201ENST00000373159 NBPF14Q5TI25 921 aa18.87■□□□□ 0.61
TRAPPC3-201ENST00000373159 LMO7Q8WWI1 1683 aa18.86■□□□□ 0.61
TRAPPC3-201ENST00000373159 AATKQ6ZMQ8 1374 aa18.86■□□□□ 0.61
TRAPPC3-201ENST00000373159 COL5A2P05997 1499 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC3-201ENST00000373159 USP6P35125 1406 aa18.85■□□□□ 0.61
TRAPPC3-201ENST00000373159 L3MBTL2Q969R5 705 aa18.85■□□□□ 0.61
TRAPPC3-201ENST00000373159 CRB1P82279 1406 aa18.84■□□□□ 0.61
TRAPPC3-201ENST00000373159 EVC2Q86UK5 1308 aa18.83■□□□□ 0.61
TRAPPC3-201ENST00000373159 ZNF692Q9BU19 519 aaPredicted RBP18.83■□□□□ 0.6
TRAPPC3-201ENST00000373159 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
TRAPPC3-201ENST00000373159 PLSCR1O15162 318 aa18.81■□□□□ 0.6
TRAPPC3-201ENST00000373159 TOM1L2Q6ZVM7 507 aa18.81■□□□□ 0.6
TRAPPC3-201ENST00000373159 AXIN2Q9Y2T1 843 aa18.81■□□□□ 0.6
TRAPPC3-201ENST00000373159 DDB1Q16531 1140 aa18.8■□□□□ 0.6
TRAPPC3-201ENST00000373159 SLIT3O75094 1523 aa18.79■□□□□ 0.6
TRAPPC3-201ENST00000373159 ARHGEF25Q86VW2 580 aa18.79■□□□□ 0.6
TRAPPC3-201ENST00000373159 KCNH5Q8NCM2 988 aa18.79■□□□□ 0.6
TRAPPC3-201ENST00000373159 CDCA7Q9BWT1 371 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-201ENST00000373159 TTC21BQ7Z4L5 1316 aa18.78■□□□□ 0.6
TRAPPC3-201ENST00000373159 WDR17Q8IZU2 1322 aa18.78■□□□□ 0.6
TRAPPC3-201ENST00000373159 OVOS2A0A0G2JMS6 1433 aa18.78■□□□□ 0.6
TRAPPC3-201ENST00000373159 OVOS2A0A0J9YW53 1432 aa18.78■□□□□ 0.6
TRAPPC3-201ENST00000373159 OVOS2Q6IE36 1432 aa18.78■□□□□ 0.6
TRAPPC3-201ENST00000373159 BCL11BQ9C0K0 894 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC3-201ENST00000373159 SPON1Q9HCB6 807 aa18.77■□□□□ 0.6
TRAPPC3-201ENST00000373159 SIN3AQ96ST3 1273 aa18.76■□□□□ 0.59
TRAPPC3-201ENST00000373159 PARP4Q9UKK3 1724 aaKnown RBP18.76■□□□□ 0.59
TRAPPC3-201ENST00000373159 TTC21AQ8NDW8 1320 aa18.75■□□□□ 0.59
TRAPPC3-201ENST00000373159 KCNQ2O43526 872 aa18.75■□□□□ 0.59
TRAPPC3-201ENST00000373159 MARCH10Q8NA82 808 aaPredicted RBP18.75■□□□□ 0.59
TRAPPC3-201ENST00000373159 CARD10Q9BWT7 1032 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms