RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 SART3Q15020 963 aaKnown RBP12.96□□□□□ -0.34
TRERF1-203ENST00000372917 RNF217Q8TC41 542 aa12.96□□□□□ -0.34
TRERF1-203ENST00000372917 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.34
TRERF1-203ENST00000372917 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
TRERF1-203ENST00000372917 NEUROD2Q15784 382 aa12.95□□□□□ -0.34
TRERF1-203ENST00000372917 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
TRERF1-203ENST00000372917 SYCE3A1L190 88 aa12.95□□□□□ -0.34
TRERF1-203ENST00000372917 DAPK1P53355 1430 aa12.95□□□□□ -0.34
TRERF1-203ENST00000372917 DENND4BO75064 1496 aaPredicted RBP12.95□□□□□ -0.34
TRERF1-203ENST00000372917 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
TRERF1-203ENST00000372917 SENP3Q9H4L4 574 aaPredicted RBP12.94□□□□□ -0.34
TRERF1-203ENST00000372917 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
TRERF1-203ENST00000372917 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
TRERF1-203ENST00000372917 TRIM66O15016 1216 aa12.94□□□□□ -0.34
TRERF1-203ENST00000372917 BAG4O95429 457 aaKnown RBP12.94□□□□□ -0.34
TRERF1-203ENST00000372917 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
TRERF1-203ENST00000372917 ST7Q9NRC1 585 aa12.94□□□□□ -0.34
TRERF1-203ENST00000372917 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
TRERF1-203ENST00000372917 IBTKQ9P2D0 1353 aaPredicted RBP12.93□□□□□ -0.34
TRERF1-203ENST00000372917 CHGAP10645 457 aaKnown RBP12.93□□□□□ -0.34
TRERF1-203ENST00000372917 GUCY2CP25092 1073 aa12.93□□□□□ -0.34
TRERF1-203ENST00000372917 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
TRERF1-203ENST00000372917 NCBP1Q09161 790 aaKnown RBP12.93□□□□□ -0.34
TRERF1-203ENST00000372917 PLEKHD1A6NEE1 506 aa12.93□□□□□ -0.34
TRERF1-203ENST00000372917 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
TRERF1-203ENST00000372917 GOLGA6L1Q8N7Z2 621 aa12.93□□□□□ -0.34
TRERF1-203ENST00000372917 NOL10Q9BSC4 688 aaKnown RBP12.93□□□□□ -0.34
TRERF1-203ENST00000372917 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
TRERF1-203ENST00000372917 SH3BP1Q9Y3L3 701 aa12.93□□□□□ -0.34
TRERF1-203ENST00000372917 MORC2Q9Y6X9 1032 aaPredicted RBP12.93□□□□□ -0.34
TRERF1-203ENST00000372917 CASQ1P31415 396 aa12.92□□□□□ -0.34
TRERF1-203ENST00000372917 KDM6BO15054 1643 aa12.92□□□□□ -0.34
TRERF1-203ENST00000372917 CEP120Q8N960 986 aa12.92□□□□□ -0.34
TRERF1-203ENST00000372917 SAMD9Q5K651 1589 aa12.92□□□□□ -0.34
TRERF1-203ENST00000372917 GAPVD1Q14C86 1478 aa12.92□□□□□ -0.34
TRERF1-203ENST00000372917 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
TRERF1-203ENST00000372917 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
TRERF1-203ENST00000372917 KIAA1107Q9UPP5 1409 aa12.91□□□□□ -0.34
TRERF1-203ENST00000372917 MAP2K1Q02750 393 aaPredicted RBP12.91□□□□□ -0.34
TRERF1-203ENST00000372917 KIF18AQ8NI77 898 aa12.91□□□□□ -0.34
TRERF1-203ENST00000372917 DEF6Q9H4E7 631 aa12.91□□□□□ -0.34
TRERF1-203ENST00000372917 PRPF40AO75400 957 aaKnown RBP12.91□□□□□ -0.34
TRERF1-203ENST00000372917 NAA30Q147X3 362 aaPredicted RBP12.91□□□□□ -0.34
TRERF1-203ENST00000372917 SYT10Q6XYQ8 523 aa12.91□□□□□ -0.34
TRERF1-203ENST00000372917 BRMS1Q9HCU9 246 aa12.91□□□□□ -0.34
TRERF1-203ENST00000372917 KNSTRNQ9Y448 316 aa12.91□□□□□ -0.34
TRERF1-203ENST00000372917 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
TRERF1-203ENST00000372917 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.34
TRERF1-203ENST00000372917 E2F4Q16254 413 aa12.9□□□□□ -0.34
TRERF1-203ENST00000372917 JRKLQ9Y4A0 524 aa12.9□□□□□ -0.34
TRERF1-203ENST00000372917 SMC5Q8IY18 1101 aa12.9□□□□□ -0.34
TRERF1-203ENST00000372917 SUFUQ9UMX1 484 aa12.9□□□□□ -0.34
TRERF1-203ENST00000372917 NBPF20Q3BBV1 942 aa12.89□□□□□ -0.35
TRERF1-203ENST00000372917 MYO1CO00159 1063 aa12.89□□□□□ -0.35
TRERF1-203ENST00000372917 NEK11Q8NG66 645 aa12.89□□□□□ -0.35
TRERF1-203ENST00000372917 ABCC5O15440 1437 aa12.89□□□□□ -0.35
TRERF1-203ENST00000372917 CLSTN1O94985 981 aa12.89□□□□□ -0.35
TRERF1-203ENST00000372917 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
TRERF1-203ENST00000372917 ANKRD30AQ9BXX3 1397 aa12.89□□□□□ -0.35
TRERF1-203ENST00000372917 PDZRN3Q9UPQ7 1066 aa12.88□□□□□ -0.35
TRERF1-203ENST00000372917 KRBA2Q6ZNG9 492 aa12.88□□□□□ -0.35
TRERF1-203ENST00000372917 CXorf56Q9H5V9 222 aa12.88□□□□□ -0.35
TRERF1-203ENST00000372917 COG6Q9Y2V7 657 aa12.88□□□□□ -0.35
TRERF1-203ENST00000372917 LAMC3Q9Y6N6 1575 aa12.88□□□□□ -0.35
TRERF1-203ENST00000372917 SGSM3Q96HU1 749 aa12.88□□□□□ -0.35
TRERF1-203ENST00000372917 DONSONQ9NYP3 566 aa12.88□□□□□ -0.35
TRERF1-203ENST00000372917 CDCA8Q53HL2 280 aa12.87□□□□□ -0.35
TRERF1-203ENST00000372917 CALR3Q96L12 384 aaKnown RBP12.87□□□□□ -0.35
TRERF1-203ENST00000372917 MAGI3Q5TCQ9 1506 aa12.87□□□□□ -0.35
TRERF1-203ENST00000372917 CYP2C19P33261 490 aa12.87□□□□□ -0.35
TRERF1-203ENST00000372917 DDIT3P35638 169 aa12.87□□□□□ -0.35
TRERF1-203ENST00000372917 NUP155O75694 1391 aa12.87□□□□□ -0.35
TRERF1-203ENST00000372917 CDK13Q14004 1512 aaKnown RBP12.87□□□□□ -0.35
TRERF1-203ENST00000372917 KIF21AQ7Z4S6 1674 aa12.87□□□□□ -0.35
TRERF1-203ENST00000372917 CTIFO43310 598 aaKnown RBP12.86□□□□□ -0.35
TRERF1-203ENST00000372917 CCDC191Q8NCU4 936 aa12.86□□□□□ -0.35
TRERF1-203ENST00000372917 CLUAP1Q96AJ1 413 aa12.86□□□□□ -0.35
TRERF1-203ENST00000372917 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
TRERF1-203ENST00000372917 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
TRERF1-203ENST00000372917 BCAR3O75815 825 aa12.86□□□□□ -0.35
TRERF1-203ENST00000372917 LRCH2Q5VUJ6 765 aa12.86□□□□□ -0.35
TRERF1-203ENST00000372917 PPP2R5AQ15172 486 aa12.85□□□□□ -0.35
TRERF1-203ENST00000372917 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
TRERF1-203ENST00000372917 BIRC2Q13490 618 aa12.85□□□□□ -0.35
TRERF1-203ENST00000372917 CCDC91Q7Z6B0 441 aa12.85□□□□□ -0.35
TRERF1-203ENST00000372917 GTF3C6Q969F1 213 aa12.85□□□□□ -0.35
TRERF1-203ENST00000372917 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRERF1-203ENST00000372917 V9GYY5 206 aaPredicted RBP12.85□□□□□ -0.35
TRERF1-203ENST00000372917 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
TRERF1-203ENST00000372917 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
TRERF1-203ENST00000372917 TSPY26PQ9H489 355 aa12.84□□□□□ -0.35
TRERF1-203ENST00000372917 LCMT1Q9UIC8 334 aa12.84□□□□□ -0.35
TRERF1-203ENST00000372917 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
TRERF1-203ENST00000372917 RALGAPBQ86X10 1494 aa12.84□□□□□ -0.35
TRERF1-203ENST00000372917 NPHP1O15259 732 aa12.84□□□□□ -0.35
TRERF1-203ENST00000372917 POLR3GO15318 223 aaPredicted RBP12.84□□□□□ -0.35
TRERF1-203ENST00000372917 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
TRERF1-203ENST00000372917 TEX35Q5T0J7 233 aa12.84□□□□□ -0.35
TRERF1-203ENST00000372917 PANK1Q8TE04 598 aa12.84□□□□□ -0.35
TRERF1-203ENST00000372917 KIF14Q15058 1648 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms