RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 CD163L1Q9NR16 1453 aa35.19■■■■□ 3.22
C9orf50-201ENST00000372478 CPSF1Q10570 1443 aaKnown RBP35.19■■■■□ 3.22
C9orf50-201ENST00000372478 MON2Q7Z3U7 1717 aa35.17■■■■□ 3.22
C9orf50-201ENST00000372478 CABLES1Q8TDN4 633 aa35.16■■■■□ 3.22
C9orf50-201ENST00000372478 ZNF692Q9BU19 519 aaPredicted RBP35.16■■■■□ 3.22
C9orf50-201ENST00000372478 KTN1Q86UP2 1357 aaKnown RBP35.16■■■■□ 3.22
C9orf50-201ENST00000372478 MEX3CQ5U5Q3 659 aaKnown RBP35.15■■■■□ 3.22
C9orf50-201ENST00000372478 ABCA3Q99758 1704 aa35.14■■■■□ 3.22
C9orf50-201ENST00000372478 POLR3GLQ9BT43 218 aa35.14■■■■□ 3.22
C9orf50-201ENST00000372478 NINLQ9Y2I6 1382 aa35.13■■■■□ 3.21
C9orf50-201ENST00000372478 ADAMTS2O95450 1211 aa35.13■■■■□ 3.21
C9orf50-201ENST00000372478 NUTM2GQ5VZR2 741 aa35.13■■■■□ 3.21
C9orf50-201ENST00000372478 NRKQ7Z2Y5 1582 aa35.12■■■■□ 3.21
C9orf50-201ENST00000372478 MYOM1P52179 1685 aa35.12■■■■□ 3.21
C9orf50-201ENST00000372478 SSH2Q76I76 1423 aa35.12■■■■□ 3.21
C9orf50-201ENST00000372478 HDGFL2Q7Z4V5 671 aaPredicted RBP35.12■■■■□ 3.21
C9orf50-201ENST00000372478 A0A1W2PP64 1363 aa35.11■■■■□ 3.21
C9orf50-201ENST00000372478 BRD4O60885 1362 aaPredicted RBP35.11■■■■□ 3.21
C9orf50-201ENST00000372478 TERF2IPQ9NYB0 399 aa35.11■■■■□ 3.21
C9orf50-201ENST00000372478 ABTB2Q8N961 1025 aa35.1■■■■□ 3.21
C9orf50-201ENST00000372478 PHF23Q9BUL5 403 aaPredicted RBP35.1■■■■□ 3.21
C9orf50-201ENST00000372478 C11orf95C9JLR9 678 aaPredicted RBP35.09■■■■□ 3.21
C9orf50-201ENST00000372478 HAP1P54257 671 aaPredicted RBP35.08■■■■□ 3.21
C9orf50-201ENST00000372478 CRYBG1Q9Y4K1 1723 aa35.08■■■■□ 3.21
C9orf50-201ENST00000372478 TTC21BQ7Z4L5 1316 aa35.08■■■■□ 3.21
C9orf50-201ENST00000372478 MARF1Q9Y4F3 1742 aaKnown RBP35.07■■■■□ 3.21
C9orf50-201ENST00000372478 PIK3C2AO00443 1686 aa35.06■■■■□ 3.2
C9orf50-201ENST00000372478 C8orf37Q96NL8 207 aa35.04■■■■□ 3.2
C9orf50-201ENST00000372478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.03■■■■□ 3.2
C9orf50-201ENST00000372478 ANKRD36BQ8N2N9 1353 aa35.03■■■■□ 3.2
C9orf50-201ENST00000372478 PHRF1Q9P1Y6 1649 aaKnown RBP35.02■■■■□ 3.2
C9orf50-201ENST00000372478 EDC4Q6P2E9 1401 aaKnown RBP35.01■■■■□ 3.2
C9orf50-201ENST00000372478 TTC21AQ8NDW8 1320 aa35.01■■■■□ 3.2
C9orf50-201ENST00000372478 NLRP6P59044 892 aa34.99■■■■□ 3.19
C9orf50-201ENST00000372478 NLRP13Q86W25 1043 aa34.99■■■■□ 3.19
C9orf50-201ENST00000372478 RGS17Q9UGC6 210 aaPredicted RBP34.99■■■■□ 3.19
C9orf50-201ENST00000372478 NGLY1Q96IV0 654 aa34.97■■■■□ 3.19
C9orf50-201ENST00000372478 KIF7Q2M1P5 1343 aa34.96■■■■□ 3.19
C9orf50-201ENST00000372478 USP19O94966 1318 aa34.95■■■■□ 3.19
C9orf50-201ENST00000372478 AFF2P51816 1311 aa34.95■■■■□ 3.19
C9orf50-201ENST00000372478 NME9Q86XW9 330 aa34.95■■■■□ 3.18
C9orf50-201ENST00000372478 ZRANB1Q9UGI0 708 aa34.94■■■■□ 3.18
C9orf50-201ENST00000372478 CARD14Q9BXL6 1004 aa34.89■■■■□ 3.18
C9orf50-201ENST00000372478 SLIT3O75094 1523 aa34.89■■■■□ 3.18
C9orf50-201ENST00000372478 GCP02774 474 aa34.88■■■■□ 3.17
C9orf50-201ENST00000372478 ZC3H6P61129 1189 aaKnown RBP34.88■■■■□ 3.17
C9orf50-201ENST00000372478 PLCH1Q4KWH8 1693 aa34.87■■■■□ 3.17
C9orf50-201ENST00000372478 USP54Q70EL1 1684 aa34.87■■■■□ 3.17
C9orf50-201ENST00000372478 FAM83GA6ND36 823 aa34.86■■■■□ 3.17
C9orf50-201ENST00000372478 USP31Q70CQ4 1352 aa34.86■■■■□ 3.17
C9orf50-201ENST00000372478 KIAA0232Q92628 1395 aa34.86■■■■□ 3.17
C9orf50-201ENST00000372478 NSD3Q9BZ95 1437 aa34.86■■■■□ 3.17
C9orf50-201ENST00000372478 FNBP4Q8N3X1 1017 aaPredicted RBP34.85■■■■□ 3.17
C9orf50-201ENST00000372478 CCDC7Q96M83 1385 aa34.85■■■■□ 3.17
C9orf50-201ENST00000372478 ZNF772Q68DY9 489 aaPredicted RBP34.84■■■■□ 3.17
C9orf50-201ENST00000372478 POTEAQ6S8J7 498 aa34.84■■■■□ 3.17
C9orf50-201ENST00000372478 WASHC2AQ641Q2 1341 aa34.84■■■■□ 3.17
C9orf50-201ENST00000372478 SOX12O15370 315 aa34.84■■■■□ 3.17
C9orf50-201ENST00000372478 PRDM11Q9NQV5 511 aa34.84■■■■□ 3.17
C9orf50-201ENST00000372478 COL14A1Q05707 1796 aaKnown RBP34.83■■■■□ 3.17
C9orf50-201ENST00000372478 PANK3Q9H999 370 aa34.83■■■■□ 3.17
C9orf50-201ENST00000372478 USP21Q9UK80 565 aa34.83■■■■□ 3.17
C9orf50-201ENST00000372478 KIF20BQ96Q89 1820 aa34.82■■■■□ 3.17
C9orf50-201ENST00000372478 SLIT2O94813 1529 aa34.82■■■■□ 3.16
C9orf50-201ENST00000372478 CHRNA2Q15822 529 aa34.81■■■■□ 3.16
C9orf50-201ENST00000372478 BCL9LQ86UU0 1499 aa34.8■■■■□ 3.16
C9orf50-201ENST00000372478 OVOS2A0A0J9YW53 1432 aa34.8■■■■□ 3.16
C9orf50-201ENST00000372478 OVOS2Q6IE36 1432 aa34.8■■■■□ 3.16
C9orf50-201ENST00000372478 NWD2Q9ULI1 1742 aa34.78■■■■□ 3.16
C9orf50-201ENST00000372478 FYB1O15117 783 aa34.78■■■■□ 3.16
C9orf50-201ENST00000372478 ZBTB7CA1YPR0 619 aa34.77■■■■□ 3.16
C9orf50-201ENST00000372478 GGNBP2Q9H3C7 697 aa34.77■■■■□ 3.16
C9orf50-201ENST00000372478 CPDO75976 1380 aa34.77■■■■□ 3.16
C9orf50-201ENST00000372478 NFAT5O94916 1531 aa34.77■■■■□ 3.16
C9orf50-201ENST00000372478 KCNH5Q8NCM2 988 aa34.77■■■■□ 3.16
C9orf50-201ENST00000372478 COG3Q96JB2 828 aa34.75■■■■□ 3.15
C9orf50-201ENST00000372478 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.75■■■■□ 3.15
C9orf50-201ENST00000372478 QTRT2Q9H974 415 aaKnown RBP34.74■■■■□ 3.15
C9orf50-201ENST00000372478 BTG4Q9NY30 223 aa34.74■■■■□ 3.15
C9orf50-201ENST00000372478 NRAPQ86VF7 1730 aa34.73■■■■□ 3.15
C9orf50-201ENST00000372478 UNC5CLQ8IV45 518 aa34.73■■■■□ 3.15
C9orf50-201ENST00000372478 ILDR2Q71H61 639 aa34.7■■■■□ 3.15
C9orf50-201ENST00000372478 CGNL1Q0VF96 1302 aa34.7■■■■□ 3.15
C9orf50-201ENST00000372478 LMO7Q8WWI1 1683 aa34.7■■■■□ 3.15
C9orf50-201ENST00000372478 TRPC5Q9UL62 973 aaPredicted RBP34.7■■■■□ 3.14
C9orf50-201ENST00000372478 ATRNO75882 1429 aa34.69■■■■□ 3.14
C9orf50-201ENST00000372478 LTN1O94822 1766 aa34.68■■■■□ 3.14
C9orf50-201ENST00000372478 ARHGEF25Q86VW2 580 aa34.68■■■■□ 3.14
C9orf50-201ENST00000372478 CAMTA1Q9Y6Y1 1673 aa34.67■■■■□ 3.14
C9orf50-201ENST00000372478 COL18A1P39060 1754 aa34.67■■■■□ 3.14
C9orf50-201ENST00000372478 FBLN1P23142 703 aa34.65■■■■□ 3.14
C9orf50-201ENST00000372478 AATKQ6ZMQ8 1374 aa34.64■■■■□ 3.14
C9orf50-201ENST00000372478 RGPD5Q99666 1765 aa34.64■■■■□ 3.14
C9orf50-201ENST00000372478 RXRBP28702 533 aa34.63■■■■□ 3.13
C9orf50-201ENST00000372478 ANKRD26Q9UPS8 1709 aa34.63■■■■□ 3.13
C9orf50-201ENST00000372478 STRN4Q9NRL3 753 aa34.63■■■■□ 3.13
C9orf50-201ENST00000372478 KNSTRNQ9Y448 316 aa34.62■■■■□ 3.13
C9orf50-201ENST00000372478 CCDC9Q9Y3X0 531 aaKnown RBP34.61■■■■□ 3.13
C9orf50-201ENST00000372478 RBM6P78332 1123 aaKnown RBP34.6■■■■□ 3.13
C9orf50-201ENST00000372478 VPS72Q15906 364 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms