RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 KIF20BQ96Q89 1820 aa21.64■■□□□ 1.05
TMEM53-204ENST00000372243 TRPM3Q9HCF6 1732 aaPredicted RBP21.63■■□□□ 1.05
TMEM53-204ENST00000372243 PXDNQ92626 1479 aa21.62■■□□□ 1.05
TMEM53-204ENST00000372243 KRT28Q7Z3Y7 464 aa21.62■■□□□ 1.05
TMEM53-204ENST00000372243 UBAP1LF5GYI3 381 aa21.61■■□□□ 1.05
TMEM53-204ENST00000372243 FYB1O15117 783 aa21.61■■□□□ 1.05
TMEM53-204ENST00000372243 ANP32CO43423 234 aa21.61■■□□□ 1.05
TMEM53-204ENST00000372243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.61■■□□□ 1.05
TMEM53-204ENST00000372243 ANKRD26Q9UPS8 1709 aa21.61■■□□□ 1.05
TMEM53-204ENST00000372243 PRKRIP1Q9H875 184 aaPredicted RBP21.6■■□□□ 1.05
TMEM53-204ENST00000372243 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
TMEM53-204ENST00000372243 AHDC1Q5TGY3 1603 aaPredicted RBP21.6■■□□□ 1.05
TMEM53-204ENST00000372243 SOS2Q07890 1332 aaPredicted RBP21.59■■□□□ 1.05
TMEM53-204ENST00000372243 PARD3Q8TEW0 1356 aa21.59■■□□□ 1.05
TMEM53-204ENST00000372243 RALBP1Q15311 655 aa21.58■■□□□ 1.05
TMEM53-204ENST00000372243 CC2D1BQ5T0F9 858 aaKnown RBP21.58■■□□□ 1.05
TMEM53-204ENST00000372243 PIK3C2AO00443 1686 aa21.58■■□□□ 1.05
TMEM53-204ENST00000372243 USP54Q70EL1 1684 aa21.58■■□□□ 1.05
TMEM53-204ENST00000372243 USP31Q70CQ4 1352 aa21.57■■□□□ 1.04
TMEM53-204ENST00000372243 ALS2Q96Q42 1657 aa21.57■■□□□ 1.04
TMEM53-204ENST00000372243 NME9Q86XW9 330 aa21.57■■□□□ 1.04
TMEM53-204ENST00000372243 DDX17Q92841 729 aaKnown RBP21.57■■□□□ 1.04
TMEM53-204ENST00000372243 PAK3O75914 559 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-204ENST00000372243 XPCQ01831 940 aaPredicted RBP21.56■■□□□ 1.04
TMEM53-204ENST00000372243 GGNBP2Q9H3C7 697 aa21.56■■□□□ 1.04
TMEM53-204ENST00000372243 OVOS2A0A0J9YW53 1432 aa21.55■■□□□ 1.04
TMEM53-204ENST00000372243 OVOS2Q6IE36 1432 aa21.55■■□□□ 1.04
TMEM53-204ENST00000372243 ABTB2Q8N961 1025 aa21.54■■□□□ 1.04
TMEM53-204ENST00000372243 TNS3Q68CZ2 1445 aa21.54■■□□□ 1.04
TMEM53-204ENST00000372243 PIP4K2BP78356 416 aa21.53■■□□□ 1.04
TMEM53-204ENST00000372243 COG3Q96JB2 828 aa21.53■■□□□ 1.04
TMEM53-204ENST00000372243 SPATA31A3Q5VYP0 1347 aa21.53■■□□□ 1.04
TMEM53-204ENST00000372243 MORC1Q86VD1 984 aa21.53■■□□□ 1.04
TMEM53-204ENST00000372243 SCAF1Q9H7N4 1312 aaKnown RBP21.52■■□□□ 1.04
TMEM53-204ENST00000372243 MARF1Q9Y4F3 1742 aaKnown RBP21.51■■□□□ 1.03
TMEM53-204ENST00000372243 ARHGEF10O15013 1369 aa21.51■■□□□ 1.03
TMEM53-204ENST00000372243 NLRP6P59044 892 aa21.5■■□□□ 1.03
TMEM53-204ENST00000372243 CNGB1Q14028 1251 aaPredicted RBP21.5■■□□□ 1.03
TMEM53-204ENST00000372243 NLRP13Q86W25 1043 aa21.5■■□□□ 1.03
TMEM53-204ENST00000372243 ZRANB1Q9UGI0 708 aa21.5■■□□□ 1.03
TMEM53-204ENST00000372243 PHLPP1O60346 1717 aa21.5■■□□□ 1.03
TMEM53-204ENST00000372243 MIER1Q8N108 512 aa21.48■■□□□ 1.03
TMEM53-204ENST00000372243 MYBBP1AQ9BQG0 1328 aaKnown RBP21.48■■□□□ 1.03
TMEM53-204ENST00000372243 COL16A1Q07092 1604 aaPredicted RBP21.48■■□□□ 1.03
TMEM53-204ENST00000372243 LRRC59Q96AG4 307 aaKnown RBP21.48■■□□□ 1.03
TMEM53-204ENST00000372243 MED1Q15648 1581 aaPredicted RBP21.47■■□□□ 1.03
TMEM53-204ENST00000372243 AATKQ6ZMQ8 1374 aa21.47■■□□□ 1.03
TMEM53-204ENST00000372243 USP19O94966 1318 aa21.46■■□□□ 1.03
TMEM53-204ENST00000372243 SLIT3O75094 1523 aa21.46■■□□□ 1.03
TMEM53-204ENST00000372243 PPP2R1AP30153 589 aa21.45■■□□□ 1.02
TMEM53-204ENST00000372243 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
TMEM53-204ENST00000372243 NUTM2GQ5VZR2 741 aa21.44■■□□□ 1.02
TMEM53-204ENST00000372243 CRYBG1Q9Y4K1 1723 aa21.43■■□□□ 1.02
TMEM53-204ENST00000372243 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
TMEM53-204ENST00000372243 KCNH5Q8NCM2 988 aa21.43■■□□□ 1.02
TMEM53-204ENST00000372243 COL22A1Q8NFW1 1626 aaPredicted RBP21.42■■□□□ 1.02
TMEM53-204ENST00000372243 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
TMEM53-204ENST00000372243 PHRF1Q9P1Y6 1649 aaKnown RBP21.41■■□□□ 1.02
TMEM53-204ENST00000372243 MAP2P11137 1827 aaKnown RBP21.41■■□□□ 1.02
TMEM53-204ENST00000372243 NFAT5O94916 1531 aa21.4■■□□□ 1.02
TMEM53-204ENST00000372243 SMG6Q86US8 1419 aaKnown RBP21.4■■□□□ 1.02
TMEM53-204ENST00000372243 GCP02774 474 aa21.39■■□□□ 1.01
TMEM53-204ENST00000372243 PNPLA6Q8IY17 1366 aa21.39■■□□□ 1.01
TMEM53-204ENST00000372243 POLKQ9UBT6 870 aa21.37■■□□□ 1.01
TMEM53-204ENST00000372243 ABCA3Q99758 1704 aa21.37■■□□□ 1.01
TMEM53-204ENST00000372243 KIF24Q5T7B8 1368 aa21.36■■□□□ 1.01
TMEM53-204ENST00000372243 SHPRHQ149N8 1683 aa21.36■■□□□ 1.01
TMEM53-204ENST00000372243 MTHFSP49914 203 aa21.36■■□□□ 1.01
TMEM53-204ENST00000372243 FBLN1P23142 703 aa21.35■■□□□ 1.01
TMEM53-204ENST00000372243 CDK12Q9NYV4 1490 aaPredicted RBP21.34■■□□□ 1.01
TMEM53-204ENST00000372243 LTN1O94822 1766 aa21.33■■□□□ 1.01
TMEM53-204ENST00000372243 INSRP06213 1382 aa21.33■■□□□ 1.01
TMEM53-204ENST00000372243 SOX12O15370 315 aa21.33■■□□□ 1.01
TMEM53-204ENST00000372243 RRS1Q15050 365 aaKnown RBP21.33■■□□□ 1.01
TMEM53-204ENST00000372243 CABLES1Q8TDN4 633 aa21.33■■□□□ 1.01
TMEM53-204ENST00000372243 EMILIN1Q9Y6C2 1016 aa21.33■■□□□ 1.01
TMEM53-204ENST00000372243 MAP3K19Q56UN5 1328 aa21.33■■□□□ 1
TMEM53-204ENST00000372243 JCADQ9P266 1359 aa21.33■■□□□ 1
TMEM53-204ENST00000372243 ARHGEF25Q86VW2 580 aa21.32■■□□□ 1
TMEM53-204ENST00000372243 RTL1A6NKG5 1358 aa21.32■■□□□ 1
TMEM53-204ENST00000372243 CPDO75976 1380 aa21.32■■□□□ 1
TMEM53-204ENST00000372243 HSPA1LP34931 641 aa21.31■■□□□ 1
TMEM53-204ENST00000372243 MRS2Q9HD23 443 aa21.31■■□□□ 1
TMEM53-204ENST00000372243 PEAK1Q9H792 1746 aa21.31■■□□□ 1
TMEM53-204ENST00000372243 CCDC184Q52MB2 194 aa21.31■■□□□ 1
TMEM53-204ENST00000372243 CFAP53Q96M91 514 aa21.31■■□□□ 1
TMEM53-204ENST00000372243 FLT4P35916 1363 aa21.3■■□□□ 1
TMEM53-204ENST00000372243 ABCC6O95255 1503 aa21.3■■□□□ 1
TMEM53-204ENST00000372243 COL3A1P02461 1466 aaPredicted RBP21.29■■□□□ 1
TMEM53-204ENST00000372243 PLEKHG5O94827 1062 aa21.28■■□□□ 1
TMEM53-204ENST00000372243 HAP1P54257 671 aaPredicted RBP21.28■■□□□ 1
TMEM53-204ENST00000372243 PPM1GO15355 546 aaPredicted RBP21.27■■□□□ 1
TMEM53-204ENST00000372243 AMPHP49418 695 aa21.27■■□□□ 1
TMEM53-204ENST00000372243 FBXO41Q8TF61 875 aa21.27■■□□□ 1
TMEM53-204ENST00000372243 ZC3H6P61129 1189 aaKnown RBP21.27■□□□□ 0.99
TMEM53-204ENST00000372243 IP6K1Q92551 441 aa21.27■□□□□ 0.99
TMEM53-204ENST00000372243 HOXC9P31274 260 aa21.26■□□□□ 0.99
TMEM53-204ENST00000372243 COL18A1P39060 1754 aa21.25■□□□□ 0.99
TMEM53-204ENST00000372243 KIAA0232Q92628 1395 aa21.25■□□□□ 0.99
TMEM53-204ENST00000372243 SPATA31A6Q5VVP1 1343 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms