RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 RALBP1Q15311 655 aa14.85□□□□□ -0.03
LCN1-202ENST00000371781 TRPM3Q9HCF6 1732 aaPredicted RBP14.85□□□□□ -0.03
LCN1-202ENST00000371781 NSD2O96028 1365 aa14.85□□□□□ -0.03
LCN1-202ENST00000371781 KIF1AQ12756 1690 aa14.84□□□□□ -0.03
LCN1-202ENST00000371781 TERF2IPQ9NYB0 399 aa14.84□□□□□ -0.03
LCN1-202ENST00000371781 PHLPP1O60346 1717 aa14.83□□□□□ -0.03
LCN1-202ENST00000371781 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.04
LCN1-202ENST00000371781 PMFBP1Q8TBY8 1022 aa14.83□□□□□ -0.04
LCN1-202ENST00000371781 OVOS2A0A0J9YW53 1432 aa14.83□□□□□ -0.04
LCN1-202ENST00000371781 OVOS2Q6IE36 1432 aa14.83□□□□□ -0.04
LCN1-202ENST00000371781 SHPRHQ149N8 1683 aa14.82□□□□□ -0.04
LCN1-202ENST00000371781 FYB1O15117 783 aa14.82□□□□□ -0.04
LCN1-202ENST00000371781 PPP2R1AP30153 589 aa14.82□□□□□ -0.04
LCN1-202ENST00000371781 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
LCN1-202ENST00000371781 CGNL1Q0VF96 1302 aa14.82□□□□□ -0.04
LCN1-202ENST00000371781 BRD4O60885 1362 aaPredicted RBP14.82□□□□□ -0.04
LCN1-202ENST00000371781 NME9Q86XW9 330 aa14.81□□□□□ -0.04
LCN1-202ENST00000371781 GGNBP2Q9H3C7 697 aa14.81□□□□□ -0.04
LCN1-202ENST00000371781 C19orf44Q9H6X5 657 aa14.81□□□□□ -0.04
LCN1-202ENST00000371781 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
LCN1-202ENST00000371781 ORAI2Q96SN7 254 aa14.8□□□□□ -0.04
LCN1-202ENST00000371781 TTC21BQ7Z4L5 1316 aa14.8□□□□□ -0.04
LCN1-202ENST00000371781 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
LCN1-202ENST00000371781 POTEAQ6S8J7 498 aa14.79□□□□□ -0.04
LCN1-202ENST00000371781 NLRP13Q86W25 1043 aa14.79□□□□□ -0.04
LCN1-202ENST00000371781 PHF8Q9UPP1 1060 aa14.79□□□□□ -0.04
LCN1-202ENST00000371781 MSH6P52701 1360 aa14.78□□□□□ -0.04
LCN1-202ENST00000371781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.78□□□□□ -0.04
LCN1-202ENST00000371781 MRS2Q9HD23 443 aa14.78□□□□□ -0.04
LCN1-202ENST00000371781 ALS2Q96Q42 1657 aa14.77□□□□□ -0.04
LCN1-202ENST00000371781 SMG6Q86US8 1419 aaKnown RBP14.77□□□□□ -0.04
LCN1-202ENST00000371781 PEAK1Q9H792 1746 aa14.76□□□□□ -0.05
LCN1-202ENST00000371781 COL16A1Q07092 1604 aaPredicted RBP14.76□□□□□ -0.05
LCN1-202ENST00000371781 PXDNQ92626 1479 aa14.76□□□□□ -0.05
LCN1-202ENST00000371781 USP31Q70CQ4 1352 aa14.75□□□□□ -0.05
LCN1-202ENST00000371781 MORC1Q86VD1 984 aa14.75□□□□□ -0.05
LCN1-202ENST00000371781 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
LCN1-202ENST00000371781 CRYBG1Q9Y4K1 1723 aa14.75□□□□□ -0.05
LCN1-202ENST00000371781 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
LCN1-202ENST00000371781 FBLN1P23142 703 aa14.74□□□□□ -0.05
LCN1-202ENST00000371781 ESCO1Q5FWF5 840 aa14.74□□□□□ -0.05
LCN1-202ENST00000371781 NGDNQ8NEJ9 315 aaKnown RBP14.74□□□□□ -0.05
LCN1-202ENST00000371781 PNISRQ8TF01 805 aaKnown RBP14.74□□□□□ -0.05
LCN1-202ENST00000371781 YTHDC1Q96MU7 727 aaKnown RBP14.74□□□□□ -0.05
LCN1-202ENST00000371781 TTC21AQ8NDW8 1320 aa14.73□□□□□ -0.05
LCN1-202ENST00000371781 TNNT2P45379 298 aaPredicted RBP14.73□□□□□ -0.05
LCN1-202ENST00000371781 SLIT3O75094 1523 aa14.72□□□□□ -0.05
LCN1-202ENST00000371781 NFAT5O94916 1531 aa14.72□□□□□ -0.05
LCN1-202ENST00000371781 MAP2P11137 1827 aaKnown RBP14.72□□□□□ -0.05
LCN1-202ENST00000371781 ATF3P18847 181 aa14.72□□□□□ -0.05
LCN1-202ENST00000371781 CADPS2Q86UW7 1296 aa14.72□□□□□ -0.05
LCN1-202ENST00000371781 DDX17Q92841 729 aaKnown RBP14.72□□□□□ -0.05
LCN1-202ENST00000371781 AATKQ6ZMQ8 1374 aa14.71□□□□□ -0.06
LCN1-202ENST00000371781 LRP6O75581 1613 aa14.7□□□□□ -0.06
LCN1-202ENST00000371781 BLMP54132 1417 aaPredicted RBP14.7□□□□□ -0.06
LCN1-202ENST00000371781 XPCQ01831 940 aaPredicted RBP14.7□□□□□ -0.06
LCN1-202ENST00000371781 BRINP3Q76B58 766 aa14.7□□□□□ -0.06
LCN1-202ENST00000371781 SLAIN2Q9P270 581 aa14.7□□□□□ -0.06
LCN1-202ENST00000371781 JCADQ9P266 1359 aa14.7□□□□□ -0.06
LCN1-202ENST00000371781 PHRF1Q9P1Y6 1649 aaKnown RBP14.7□□□□□ -0.06
LCN1-202ENST00000371781 CDK12Q9NYV4 1490 aaPredicted RBP14.69□□□□□ -0.06
LCN1-202ENST00000371781 FOXO3O43524 673 aa14.69□□□□□ -0.06
LCN1-202ENST00000371781 PNPLA6Q8IY17 1366 aa14.69□□□□□ -0.06
LCN1-202ENST00000371781 MTHFSP49914 203 aa14.68□□□□□ -0.06
LCN1-202ENST00000371781 FAM9BQ8IZU0 186 aa14.68□□□□□ -0.06
LCN1-202ENST00000371781 AHDC1Q5TGY3 1603 aaPredicted RBP14.67□□□□□ -0.06
LCN1-202ENST00000371781 ABCA3Q99758 1704 aa14.67□□□□□ -0.06
LCN1-202ENST00000371781 POLKQ9UBT6 870 aa14.67□□□□□ -0.06
LCN1-202ENST00000371781 EMILIN1Q9Y6C2 1016 aa14.67□□□□□ -0.06
LCN1-202ENST00000371781 LTN1O94822 1766 aa14.66□□□□□ -0.06
LCN1-202ENST00000371781 INSRP06213 1382 aa14.66□□□□□ -0.06
LCN1-202ENST00000371781 NUTM2GQ5VZR2 741 aa14.66□□□□□ -0.06
LCN1-202ENST00000371781 COG3Q96JB2 828 aa14.66□□□□□ -0.06
LCN1-202ENST00000371781 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
LCN1-202ENST00000371781 SBNO1A3KN83 1393 aa14.65□□□□□ -0.06
LCN1-202ENST00000371781 RRS1Q15050 365 aaKnown RBP14.65□□□□□ -0.06
LCN1-202ENST00000371781 KRT28Q7Z3Y7 464 aa14.65□□□□□ -0.06
LCN1-202ENST00000371781 RGPD1P0DJD0 1748 aa14.65□□□□□ -0.06
LCN1-202ENST00000371781 USP19O94966 1318 aa14.65□□□□□ -0.06
LCN1-202ENST00000371781 PSME1Q06323 249 aa14.63□□□□□ -0.07
LCN1-202ENST00000371781 PAK3O75914 559 aaPredicted RBP14.62□□□□□ -0.07
LCN1-202ENST00000371781 SOS2Q07890 1332 aaPredicted RBP14.62□□□□□ -0.07
LCN1-202ENST00000371781 MAP3K19Q56UN5 1328 aa14.62□□□□□ -0.07
LCN1-202ENST00000371781 NPHP3Q7Z494 1330 aa14.62□□□□□ -0.07
LCN1-202ENST00000371781 SENP3-EIF4A1A0A087X0R7 540 aa14.61□□□□□ -0.07
LCN1-202ENST00000371781 NLRP6P59044 892 aa14.61□□□□□ -0.07
LCN1-202ENST00000371781 ABTB2Q8N961 1025 aa14.61□□□□□ -0.07
LCN1-202ENST00000371781 ADAMTS8Q9UP79 889 aa14.61□□□□□ -0.07
LCN1-202ENST00000371781 SPATA31A6Q5VVP1 1343 aa14.61□□□□□ -0.07
LCN1-202ENST00000371781 SOX12O15370 315 aa14.6□□□□□ -0.07
LCN1-202ENST00000371781 SPATA31A3Q5VYP0 1347 aa14.6□□□□□ -0.07
LCN1-202ENST00000371781 COL18A1P39060 1754 aa14.6□□□□□ -0.07
LCN1-202ENST00000371781 MEX3CQ5U5Q3 659 aaKnown RBP14.59□□□□□ -0.07
LCN1-202ENST00000371781 HNRNPUQ00839 825 aaKnown RBP eCLIP14.58□□□□□ -0.08
LCN1-202ENST00000371781 COL22A1Q8NFW1 1626 aaPredicted RBP14.57□□□□□ -0.08
LCN1-202ENST00000371781 IL13P35225 146 aa14.56□□□□□ -0.08
LCN1-202ENST00000371781 ZNF772Q68DY9 489 aaPredicted RBP14.56□□□□□ -0.08
LCN1-202ENST00000371781 FLT4P35916 1363 aa14.56□□□□□ -0.08
LCN1-202ENST00000371781 CAMTA1Q9Y6Y1 1673 aa14.55□□□□□ -0.08
LCN1-202ENST00000371781 RGPD2P0DJD1 1756 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms