RNA–Protein interactions for RNA: ENST00000371527.5

NKRF-202, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-202ENST00000371527 UPF1Q92900 1129 aaKnown RBP eCLIP6.97□□□□□ -1.29
NKRF-202ENST00000371527 ROCK2O75116 1388 aaKnown RBP6.96□□□□□ -1.29
NKRF-202ENST00000371527 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.96□□□□□ -1.3
NKRF-202ENST00000371527 LMOD2Q6P5Q4 547 aa6.96□□□□□ -1.3
NKRF-202ENST00000371527 GJD4Q96KN9 370 aaPredicted RBP6.96□□□□□ -1.3
NKRF-202ENST00000371527 ABCA3Q99758 1704 aa6.96□□□□□ -1.3
NKRF-202ENST00000371527 BRD4O60885 1362 aaPredicted RBP6.96□□□□□ -1.3
NKRF-202ENST00000371527 FAM83GA6ND36 823 aa6.96□□□□□ -1.3
NKRF-202ENST00000371527 CABP2Q9NPB3 220 aa6.96□□□□□ -1.3
NKRF-202ENST00000371527 HAP1P54257 671 aaPredicted RBP6.95□□□□□ -1.3
NKRF-202ENST00000371527 VPS72Q15906 364 aa6.95□□□□□ -1.3
NKRF-202ENST00000371527 QRICH2Q9H0J4 1663 aa6.95□□□□□ -1.3
NKRF-202ENST00000371527 EVC2Q86UK5 1308 aa6.95□□□□□ -1.3
NKRF-202ENST00000371527 SRPK2P78362 688 aaKnown RBP6.95□□□□□ -1.3
NKRF-202ENST00000371527 NCBP3Q53F19 620 aaKnown RBP6.95□□□□□ -1.3
NKRF-202ENST00000371527 TONSLQ96HA7 1378 aa6.95□□□□□ -1.3
NKRF-202ENST00000371527 PPIP5K1Q6PFW1 1433 aa6.95□□□□□ -1.3
NKRF-202ENST00000371527 RALGAPBQ86X10 1494 aa6.94□□□□□ -1.3
NKRF-202ENST00000371527 CRYBG1Q9Y4K1 1723 aa6.94□□□□□ -1.3
NKRF-202ENST00000371527 PAK3O75914 559 aaPredicted RBP6.94□□□□□ -1.3
NKRF-202ENST00000371527 SBNO2Q9Y2G9 1366 aa6.94□□□□□ -1.3
NKRF-202ENST00000371527 NWD2Q9ULI1 1742 aa6.94□□□□□ -1.3
NKRF-202ENST00000371527 GLI3P10071 1580 aa6.94□□□□□ -1.3
NKRF-202ENST00000371527 ONECUT3O60422 494 aaPredicted RBP6.93□□□□□ -1.3
NKRF-202ENST00000371527 CABP1Q9NZU7 370 aa6.93□□□□□ -1.3
NKRF-202ENST00000371527 SSH2Q76I76 1423 aa6.93□□□□□ -1.3
NKRF-202ENST00000371527 USP19O94966 1318 aa6.93□□□□□ -1.3
NKRF-202ENST00000371527 PLEKHG5O94827 1062 aa6.93□□□□□ -1.3
NKRF-202ENST00000371527 CARD11Q9BXL7 1154 aa6.93□□□□□ -1.3
NKRF-202ENST00000371527 COL14A1Q05707 1796 aaKnown RBP6.93□□□□□ -1.3
NKRF-202ENST00000371527 ATAD2Q6PL18 1390 aa6.93□□□□□ -1.3
NKRF-202ENST00000371527 PLCH1Q4KWH8 1693 aa6.93□□□□□ -1.3
NKRF-202ENST00000371527 USP6P35125 1406 aa6.92□□□□□ -1.3
NKRF-202ENST00000371527 PUS7Q96PZ0 661 aaKnown RBP6.92□□□□□ -1.3
NKRF-202ENST00000371527 NRAPQ86VF7 1730 aa6.92□□□□□ -1.3
NKRF-202ENST00000371527 BTG4Q9NY30 223 aa6.91□□□□□ -1.3
NKRF-202ENST00000371527 NLRP13Q86W25 1043 aa6.91□□□□□ -1.3
NKRF-202ENST00000371527 ABTB2Q8N961 1025 aa6.91□□□□□ -1.3
NKRF-202ENST00000371527 ZNF692Q9BU19 519 aaPredicted RBP6.91□□□□□ -1.3
NKRF-202ENST00000371527 PHRF1Q9P1Y6 1649 aaKnown RBP6.91□□□□□ -1.3
NKRF-202ENST00000371527 CPDO75976 1380 aa6.91□□□□□ -1.3
NKRF-202ENST00000371527 KIAA0232Q92628 1395 aa6.91□□□□□ -1.3
NKRF-202ENST00000371527 NUTM2GQ5VZR2 741 aa6.91□□□□□ -1.3
NKRF-202ENST00000371527 PRDM11Q9NQV5 511 aa6.91□□□□□ -1.3
NKRF-202ENST00000371527 CPSF1Q10570 1443 aaKnown RBP6.91□□□□□ -1.3
NKRF-202ENST00000371527 SEPT12Q8IYM1 358 aa6.9□□□□□ -1.3
NKRF-202ENST00000371527 SPATA31A5Q5VU36 1347 aa6.9□□□□□ -1.3
NKRF-202ENST00000371527 SPATA31A7Q8IWB4 1347 aa6.9□□□□□ -1.3
NKRF-202ENST00000371527 CLSPNQ9HAW4 1339 aa6.9□□□□□ -1.3
NKRF-202ENST00000371527 TIMELESSQ9UNS1 1208 aa6.9□□□□□ -1.3
NKRF-202ENST00000371527 TTC21BQ7Z4L5 1316 aa6.9□□□□□ -1.31
NKRF-202ENST00000371527 NRKQ7Z2Y5 1582 aa6.9□□□□□ -1.31
NKRF-202ENST00000371527 SLIT3O75094 1523 aa6.89□□□□□ -1.31
NKRF-202ENST00000371527 EIF5BO60841 1220 aaKnown RBP6.89□□□□□ -1.31
NKRF-202ENST00000371527 GCP02774 474 aa6.89□□□□□ -1.31
NKRF-202ENST00000371527 TTC21AQ8NDW8 1320 aa6.89□□□□□ -1.31
NKRF-202ENST00000371527 ZC3H6P61129 1189 aaKnown RBP6.89□□□□□ -1.31
NKRF-202ENST00000371527 CHRNA2Q15822 529 aa6.89□□□□□ -1.31
NKRF-202ENST00000371527 CCDC125Q86Z20 511 aa6.89□□□□□ -1.31
NKRF-202ENST00000371527 CCDC9Q9Y3X0 531 aaKnown RBP6.89□□□□□ -1.31
NKRF-202ENST00000371527 TESK2Q96S53 571 aa6.89□□□□□ -1.31
NKRF-202ENST00000371527 SPATA31A1Q5TZJ5 1347 aa6.88□□□□□ -1.31
NKRF-202ENST00000371527 NLRP6P59044 892 aa6.88□□□□□ -1.31
NKRF-202ENST00000371527 AKAP12Q02952 1782 aa6.88□□□□□ -1.31
NKRF-202ENST00000371527 KRT27Q7Z3Y8 459 aa6.88□□□□□ -1.31
NKRF-202ENST00000371527 CD163L1Q9NR16 1453 aa6.88□□□□□ -1.31
NKRF-202ENST00000371527 LMO7Q8WWI1 1683 aa6.88□□□□□ -1.31
NKRF-202ENST00000371527 USP31Q70CQ4 1352 aa6.87□□□□□ -1.31
NKRF-202ENST00000371527 CAMTA1Q9Y6Y1 1673 aa6.87□□□□□ -1.31
NKRF-202ENST00000371527 FAM98CQ17RN3 349 aaKnown RBP6.87□□□□□ -1.31
NKRF-202ENST00000371527 AATKQ6ZMQ8 1374 aa6.87□□□□□ -1.31
NKRF-202ENST00000371527 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
NKRF-202ENST00000371527 PIK3C2AO00443 1686 aa6.87□□□□□ -1.31
NKRF-202ENST00000371527 ST20-MTHFSA0A0A6YYL1 179 aa6.87□□□□□ -1.31
NKRF-202ENST00000371527 BARGINQ6ZT62 677 aa6.87□□□□□ -1.31
NKRF-202ENST00000371527 THSD7AQ9UPZ6 1657 aa6.87□□□□□ -1.31
NKRF-202ENST00000371527 BRWD3Q6RI45 1802 aa6.86□□□□□ -1.31
NKRF-202ENST00000371527 EVA1CP58658 441 aa6.86□□□□□ -1.31
NKRF-202ENST00000371527 SLC12A5Q9H2X9 1139 aa6.86□□□□□ -1.31
NKRF-202ENST00000371527 ARHGEF25Q86VW2 580 aa6.86□□□□□ -1.31
NKRF-202ENST00000371527 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
NKRF-202ENST00000371527 NINLQ9Y2I6 1382 aa6.86□□□□□ -1.31
NKRF-202ENST00000371527 BLMP54132 1417 aaPredicted RBP6.86□□□□□ -1.31
NKRF-202ENST00000371527 MON2Q7Z3U7 1717 aa6.86□□□□□ -1.31
NKRF-202ENST00000371527 HDGFL2Q7Z4V5 671 aaPredicted RBP6.86□□□□□ -1.31
NKRF-202ENST00000371527 KCNH5Q8NCM2 988 aa6.86□□□□□ -1.31
NKRF-202ENST00000371527 LARP1Q6PKG0 1096 aaKnown RBP6.85□□□□□ -1.31
NKRF-202ENST00000371527 THRAP3Q9Y2W1 955 aaKnown RBP6.85□□□□□ -1.31
NKRF-202ENST00000371527 COL18A1P39060 1754 aa6.85□□□□□ -1.31
NKRF-202ENST00000371527 COL5A2P05997 1499 aaPredicted RBP6.85□□□□□ -1.31
NKRF-202ENST00000371527 USP47Q96K76 1375 aa6.85□□□□□ -1.31
NKRF-202ENST00000371527 TMC1Q8TDI8 760 aa6.85□□□□□ -1.31
NKRF-202ENST00000371527 TERF2IPQ9NYB0 399 aa6.85□□□□□ -1.31
NKRF-202ENST00000371527 EDC4Q6P2E9 1401 aaKnown RBP6.85□□□□□ -1.31
NKRF-202ENST00000371527 USP54Q70EL1 1684 aa6.85□□□□□ -1.31
NKRF-202ENST00000371527 NFAT5O94916 1531 aa6.84□□□□□ -1.31
NKRF-202ENST00000371527 TCP11L2Q8N4U5 519 aa6.84□□□□□ -1.31
NKRF-202ENST00000371527 ZRANB1Q9UGI0 708 aa6.84□□□□□ -1.31
NKRF-202ENST00000371527 A0A1W2PP64 1363 aa6.84□□□□□ -1.32
NKRF-202ENST00000371527 TMF1P82094 1093 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms