RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
PDE6C-201ENST00000371447 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
PDE6C-201ENST00000371447 KDM2BQ8NHM5 1336 aa15.09■□□□□ 0.01
PDE6C-201ENST00000371447 WASLO00401 505 aaPredicted RBP15.09■□□□□ 0.01
PDE6C-201ENST00000371447 INSRP06213 1382 aa15.08■□□□□ 0
PDE6C-201ENST00000371447 WDR63Q8IWG1 891 aa15.08■□□□□ 0
PDE6C-201ENST00000371447 TRIM35Q9UPQ4 493 aa15.08■□□□□ 0
PDE6C-201ENST00000371447 ARHGAP31Q2M1Z3 1444 aa15.08■□□□□ 0
PDE6C-201ENST00000371447 FAM83GA6ND36 823 aa15.07■□□□□ 0
PDE6C-201ENST00000371447 RTL5Q5HYW3 569 aaPredicted RBP15.07■□□□□ 0
PDE6C-201ENST00000371447 C14orf37Q86TY3 774 aa15.07■□□□□ 0
PDE6C-201ENST00000371447 SSH1Q8WYL5 1049 aa15.07■□□□□ 0
PDE6C-201ENST00000371447 MYO5BQ9ULV0 1848 aa15.07■□□□□ 0
PDE6C-201ENST00000371447 MS4A1P11836 297 aa15.07■□□□□ 0
PDE6C-201ENST00000371447 IFT172Q9UG01 1749 aa15.07■□□□□ 0
PDE6C-201ENST00000371447 COG3Q96JB2 828 aa15.07■□□□□ 0
PDE6C-201ENST00000371447 SETBP1Q9Y6X0 1596 aa15.06■□□□□ 0
PDE6C-201ENST00000371447 RICTORQ6R327 1708 aa15.06■□□□□ 0
PDE6C-201ENST00000371447 ABCC11Q96J66 1382 aa15.06■□□□□ 0
PDE6C-201ENST00000371447 ZBTB7CA1YPR0 619 aa15.06■□□□□ 0
PDE6C-201ENST00000371447 LTKP29376 864 aa15.06■□□□□ 0
PDE6C-201ENST00000371447 NOB1Q9ULX3 412 aaKnown RBP15.06■□□□□ 0
PDE6C-201ENST00000371447 PDE3AQ14432 1141 aa15.05■□□□□ -0
PDE6C-201ENST00000371447 FAM161AQ3B820 660 aa15.04■□□□□ -0
PDE6C-201ENST00000371447 ZKSCAN2Q63HK3 967 aa15.04■□□□□ -0
PDE6C-201ENST00000371447 PLEKHF1Q96S99 279 aa15.04■□□□□ -0
PDE6C-201ENST00000371447 PTPRMP28827 1452 aa15.04■□□□□ -0
PDE6C-201ENST00000371447 DZIP1LQ8IYY4 767 aaKnown RBP15.04■□□□□ -0
PDE6C-201ENST00000371447 CCDC61Q9Y6R9 512 aa15.04■□□□□ -0
PDE6C-201ENST00000371447 AEBP1Q8IUX7 1158 aa15.03■□□□□ -0
PDE6C-201ENST00000371447 C1orf115Q9H7X2 142 aa15.03■□□□□ -0
PDE6C-201ENST00000371447 TRIM27P14373 513 aa15.02■□□□□ -0
PDE6C-201ENST00000371447 A2ML1A8K2U0 1454 aa15.02■□□□□ -0
PDE6C-201ENST00000371447 SEC24BO95487 1268 aa15.02■□□□□ -0
PDE6C-201ENST00000371447 HDGFP51858 240 aaKnown RBP15.02■□□□□ -0
PDE6C-201ENST00000371447 NGEFQ8N5V2 710 aa15.02■□□□□ -0
PDE6C-201ENST00000371447 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.02■□□□□ -0
PDE6C-201ENST00000371447 PPIP5K1Q6PFW1 1433 aa15.02□□□□□ -0.01
PDE6C-201ENST00000371447 ALKQ9UM73 1620 aa15.02□□□□□ -0.01
PDE6C-201ENST00000371447 C8orf34Q49A92 452 aa15.02□□□□□ -0.01
PDE6C-201ENST00000371447 TSPYL6Q8N831 410 aa15.01□□□□□ -0.01
PDE6C-201ENST00000371447 LTV1Q96GA3 475 aaPredicted RBP15.01□□□□□ -0.01
PDE6C-201ENST00000371447 NEURL4Q96JN8 1562 aa15.01□□□□□ -0.01
PDE6C-201ENST00000371447 PUS7Q96PZ0 661 aaKnown RBP15□□□□□ -0.01
PDE6C-201ENST00000371447 PDZRN3Q9UPQ7 1066 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 TMEM131LA2VDJ0 1609 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 SPRYD3Q8NCJ5 442 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 PREX1Q8TCU6 1659 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 DIP2BQ9P265 1576 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 NSD2O96028 1365 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 TNRQ92752 1358 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 SULT6B1Q6IMI4 303 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 TMEM57Q8N5G2 664 aa15□□□□□ -0.01
PDE6C-201ENST00000371447 NGDNQ8NEJ9 315 aaKnown RBP15□□□□□ -0.01
PDE6C-201ENST00000371447 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
PDE6C-201ENST00000371447 DEKP35659 375 aaKnown RBP14.99□□□□□ -0.01
PDE6C-201ENST00000371447 MIS18AQ9NYP9 233 aa14.99□□□□□ -0.01
PDE6C-201ENST00000371447 PRR36Q9H6K5 1346 aa14.99□□□□□ -0.01
PDE6C-201ENST00000371447 CLTCQ00610 1675 aaKnown RBP14.99□□□□□ -0.01
PDE6C-201ENST00000371447 KRT24Q2M2I5 525 aa14.99□□□□□ -0.01
PDE6C-201ENST00000371447 EID1Q9Y6B2 187 aa14.99□□□□□ -0.01
PDE6C-201ENST00000371447 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
PDE6C-201ENST00000371447 MVPQ14764 893 aaKnown RBP14.98□□□□□ -0.01
PDE6C-201ENST00000371447 HSP90AB2PQ58FF8 381 aa14.98□□□□□ -0.01
PDE6C-201ENST00000371447 ZFYVE9O95405 1425 aa14.98□□□□□ -0.01
PDE6C-201ENST00000371447 FCHSD2O94868 740 aa14.98□□□□□ -0.01
PDE6C-201ENST00000371447 RSPH6AQ9H0K4 717 aa14.98□□□□□ -0.01
PDE6C-201ENST00000371447 AMOTL2Q9Y2J4 779 aa14.98□□□□□ -0.01
PDE6C-201ENST00000371447 CD163L1Q9NR16 1453 aa14.98□□□□□ -0.01
PDE6C-201ENST00000371447 ACEP12821 1306 aa14.97□□□□□ -0.01
PDE6C-201ENST00000371447 MYO3AQ8NEV4 1616 aa14.97□□□□□ -0.01
PDE6C-201ENST00000371447 CCDC27Q2M243 656 aa14.97□□□□□ -0.01
PDE6C-201ENST00000371447 MCM10Q7L590 875 aa14.97□□□□□ -0.01
PDE6C-201ENST00000371447 ZC3H13Q5T200 1668 aaKnown RBP14.97□□□□□ -0.01
PDE6C-201ENST00000371447 RWDD1Q9H446 243 aaPredicted RBP14.97□□□□□ -0.01
PDE6C-201ENST00000371447 ATF7IPQ6VMQ6 1270 aa14.96□□□□□ -0.01
PDE6C-201ENST00000371447 ROBO2Q9HCK4 1378 aa14.96□□□□□ -0.01
PDE6C-201ENST00000371447 APBB1O00213 710 aa14.96□□□□□ -0.01
PDE6C-201ENST00000371447 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.01
PDE6C-201ENST00000371447 PNNQ9H307 717 aaKnown RBP14.95□□□□□ -0.02
PDE6C-201ENST00000371447 ARHGEF40Q8TER5 1519 aa14.95□□□□□ -0.02
PDE6C-201ENST00000371447 NFE2L2Q16236 605 aa14.94□□□□□ -0.02
PDE6C-201ENST00000371447 NINLQ9Y2I6 1382 aa14.94□□□□□ -0.02
PDE6C-201ENST00000371447 IL13P35225 146 aa14.94□□□□□ -0.02
PDE6C-201ENST00000371447 NECTIN2Q92692 538 aa14.94□□□□□ -0.02
PDE6C-201ENST00000371447 SLKQ9H2G2 1235 aaPredicted RBP14.94□□□□□ -0.02
PDE6C-201ENST00000371447 LMOD2Q6P5Q4 547 aa14.94□□□□□ -0.02
PDE6C-201ENST00000371447 LNPKQ9C0E8 428 aa14.94□□□□□ -0.02
PDE6C-201ENST00000371447 MBIPQ9NS73 344 aa14.93□□□□□ -0.02
PDE6C-201ENST00000371447 C8orf58Q8NAV2 365 aa14.93□□□□□ -0.02
PDE6C-201ENST00000371447 FOXO3O43524 673 aa14.92□□□□□ -0.02
PDE6C-201ENST00000371447 DDRGK1Q96HY6 314 aa14.92□□□□□ -0.02
PDE6C-201ENST00000371447 SHPRHQ149N8 1683 aa14.92□□□□□ -0.02
PDE6C-201ENST00000371447 MFAP1P55081 439 aaKnown RBP14.92□□□□□ -0.02
PDE6C-201ENST00000371447 TMEM2Q9UHN6 1383 aa14.92□□□□□ -0.02
PDE6C-201ENST00000371447 AMPHP49418 695 aa14.91□□□□□ -0.02
PDE6C-201ENST00000371447 IQSEC2Q5JU85 1478 aa14.91□□□□□ -0.02
PDE6C-201ENST00000371447 EIF4A2Q14240 407 aaKnown RBP14.91□□□□□ -0.02
PDE6C-201ENST00000371447 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
PDE6C-201ENST00000371447 TTC21BQ7Z4L5 1316 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms