RNA–Protein interactions for RNA: ENST00000370558.8

SH3GLB1-201, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-201ENST00000370558 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
SH3GLB1-201ENST00000370558 CCDC158Q5M9N0 1113 aa13.21□□□□□ -0.29
SH3GLB1-201ENST00000370558 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.29
SH3GLB1-201ENST00000370558 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.3
SH3GLB1-201ENST00000370558 MTHFSP49914 203 aa13.2□□□□□ -0.3
SH3GLB1-201ENST00000370558 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
SH3GLB1-201ENST00000370558 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
SH3GLB1-201ENST00000370558 LETM1O95202 739 aaPredicted RBP13.2□□□□□ -0.3
SH3GLB1-201ENST00000370558 ERC1Q8IUD2 1116 aa13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 NASPP49321 788 aaPredicted RBP13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 NEK4P51957 841 aa13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 ZNF396Q96N95 335 aaPredicted RBP13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 STK38Q15208 465 aa13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 PROSER2Q86WR7 435 aaPredicted RBP13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 TATP17735 454 aaPredicted RBP13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 CEBPZQ03701 1054 aaKnown RBP13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 STK11IPQ8N1F8 1099 aa13.19□□□□□ -0.3
SH3GLB1-201ENST00000370558 SF3B2Q13435 895 aaKnown RBP13.18□□□□□ -0.3
SH3GLB1-201ENST00000370558 MYOM3Q5VTT5 1437 aa13.18□□□□□ -0.3
SH3GLB1-201ENST00000370558 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.18□□□□□ -0.3
SH3GLB1-201ENST00000370558 PDCP20941 246 aa13.18□□□□□ -0.3
SH3GLB1-201ENST00000370558 PDCL3Q9H2J4 239 aa13.18□□□□□ -0.3
SH3GLB1-201ENST00000370558 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
SH3GLB1-201ENST00000370558 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
SH3GLB1-201ENST00000370558 SMG6Q86US8 1419 aaKnown RBP13.18□□□□□ -0.3
SH3GLB1-201ENST00000370558 PIP4K2AP48426 406 aaPredicted RBP13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 TCP11L2Q8N4U5 519 aa13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 TOP2AP11388 1531 aaKnown RBP13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 KIF7Q2M1P5 1343 aa13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 H0YHG0 523 aa13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 GNAI2P04899 355 aa13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
SH3GLB1-201ENST00000370558 TWISTNBQ3B726 338 aaPredicted RBP13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 C1orf115Q9H7X2 142 aa13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 CABP4P57796 275 aa13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 TXNDC2Q86VQ3 553 aa13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 NEFHP12036 1026 aa13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 CCDC7Q96M83 1385 aa13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 EXOSC9Q06265 439 aaKnown RBP13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 NACAP1Q9BZK3 213 aa13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 TSPY26PQ9H489 355 aa13.16□□□□□ -0.3
SH3GLB1-201ENST00000370558 MRE11P49959 708 aa13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 FIBPO43427 364 aa13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 MCM2P49736 904 aa13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 ZNHIT6Q9NWK9 470 aaKnown RBP13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 CCP110O43303 1012 aa13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 NUTM2BA6NNL0 878 aaPredicted RBP13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 NUTM2EB1AL46 878 aaPredicted RBP13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 PRPF40AO75400 957 aaKnown RBP13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 MBD3O95983 291 aa13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 NUTM2AQ8IVF1 878 aaPredicted RBP13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 SIL1Q9H173 461 aa13.15□□□□□ -0.3
SH3GLB1-201ENST00000370558 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 JMYQ8N9B5 988 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 CNTLNQ9NXG0 1405 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 STK3Q13188 491 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 CCDC69A6NI79 296 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 SOGA3Q5TF21 947 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 TOM1L2Q6ZVM7 507 aa13.14□□□□□ -0.31
SH3GLB1-201ENST00000370558 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 TANGO6Q9C0B7 1094 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 ERLIN2O94905 339 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 NUP133Q8WUM0 1156 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 SERPINC1P01008 464 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 RABEP1Q15276 862 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 CYP46A1Q9Y6A2 500 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 TRAK2O60296 914 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 STIM1Q13586 685 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 MPHOSPH8Q99549 860 aa13.13□□□□□ -0.31
SH3GLB1-201ENST00000370558 DEF6Q9H4E7 631 aa13.12□□□□□ -0.31
SH3GLB1-201ENST00000370558 WIZO95785 1651 aa13.12□□□□□ -0.31
SH3GLB1-201ENST00000370558 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
SH3GLB1-201ENST00000370558 ZRSR2Q15696 482 aaKnown RBP13.12□□□□□ -0.31
SH3GLB1-201ENST00000370558 CFAP70Q5T0N1 1121 aa13.12□□□□□ -0.31
SH3GLB1-201ENST00000370558 CWC15Q9P013 229 aaKnown RBP13.12□□□□□ -0.31
SH3GLB1-201ENST00000370558 NOB1Q9ULX3 412 aaKnown RBP13.12□□□□□ -0.31
SH3GLB1-201ENST00000370558 ANKRD62A6NC57 917 aa13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 MYL6BP14649 208 aa13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 TSPYL1Q9H0U9 437 aa13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 LUC7LQ9NQ29 371 aaKnown RBP13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 SPC24Q8NBT2 197 aa13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 CCDC57Q2TAC2 916 aa13.11□□□□□ -0.31
SH3GLB1-201ENST00000370558 DACH1Q9UI36 760 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 179 ms