RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 NBPF1Q3BBV0 1214 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 BRMS1Q9HCU9 246 aa15.09■□□□□ 0.01
TMEM56-201ENST00000370203 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0
TMEM56-201ENST00000370203 FKBP4Q02790 459 aaKnown RBP eCLIP15.08■□□□□ 0
TMEM56-201ENST00000370203 KRT18P05783 430 aaKnown RBP15.08■□□□□ 0
TMEM56-201ENST00000370203 TCP11L2Q8N4U5 519 aa15.08■□□□□ 0
TMEM56-201ENST00000370203 CDK19Q9BWU1 502 aa15.08■□□□□ 0
TMEM56-201ENST00000370203 CABP1Q9NZU7 370 aa15.08■□□□□ 0
TMEM56-201ENST00000370203 ROCK1Q13464 1354 aa15.08■□□□□ 0
TMEM56-201ENST00000370203 ARHGAP5Q13017 1502 aa15.08■□□□□ 0
TMEM56-201ENST00000370203 SMC2O95347 1197 aa15.08■□□□□ 0
TMEM56-201ENST00000370203 BCAR3O75815 825 aa15.07■□□□□ 0
TMEM56-201ENST00000370203 ZSCAN29Q8IWY8 852 aaPredicted RBP15.07■□□□□ 0
TMEM56-201ENST00000370203 CDK5RAP3Q96JB5 506 aa15.07■□□□□ 0
TMEM56-201ENST00000370203 SDF4Q9BRK5 362 aa15.07■□□□□ 0
TMEM56-201ENST00000370203 SKOR2Q2VWA4 1001 aaPredicted RBP15.07■□□□□ 0
TMEM56-201ENST00000370203 CCDC30Q5VVM6 783 aa15.07■□□□□ 0
TMEM56-201ENST00000370203 CAGE1Q8TC20 777 aa15.07■□□□□ 0
TMEM56-201ENST00000370203 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
TMEM56-201ENST00000370203 SETQ01105 290 aaPredicted RBP15.06■□□□□ 0
TMEM56-201ENST00000370203 OLFM4Q6UX06 510 aa15.06■□□□□ 0
TMEM56-201ENST00000370203 SPC24Q8NBT2 197 aa15.06■□□□□ 0
TMEM56-201ENST00000370203 TATP17735 454 aaPredicted RBP15.06■□□□□ 0
TMEM56-201ENST00000370203 PLEKHO1Q53GL0 409 aaPredicted RBP15.06■□□□□ 0
TMEM56-201ENST00000370203 TWISTNBQ3B726 338 aaPredicted RBP15.06■□□□□ 0
TMEM56-201ENST00000370203 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
TMEM56-201ENST00000370203 NINLQ9Y2I6 1382 aa15.05■□□□□ -0
TMEM56-201ENST00000370203 CDC45O75419 566 aa15.05■□□□□ -0
TMEM56-201ENST00000370203 HSP90AB4PQ58FF6 505 aa15.05■□□□□ -0
TMEM56-201ENST00000370203 CLASRPQ8N2M8 674 aaKnown RBP15.05■□□□□ -0
TMEM56-201ENST00000370203 NEK4P51957 841 aa15.04■□□□□ -0
TMEM56-201ENST00000370203 FIBPO43427 364 aa15.04■□□□□ -0
TMEM56-201ENST00000370203 CAVIN1Q6NZI2 390 aaKnown RBP15.04■□□□□ -0
TMEM56-201ENST00000370203 USHBP1Q8N6Y0 703 aa15.04■□□□□ -0
TMEM56-201ENST00000370203 CHMP5Q9NZZ3 219 aa15.04■□□□□ -0
TMEM56-201ENST00000370203 RUFY1Q96T51 708 aa15.03■□□□□ -0
TMEM56-201ENST00000370203 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
TMEM56-201ENST00000370203 HDGFL1Q5TGJ6 251 aa15.03■□□□□ -0
TMEM56-201ENST00000370203 ZNF530Q6P9A1 599 aaPredicted RBP15.03■□□□□ -0
TMEM56-201ENST00000370203 PRPF40AO75400 957 aaKnown RBP15.03■□□□□ -0
TMEM56-201ENST00000370203 RAPGEF3O95398 923 aa15.03■□□□□ -0
TMEM56-201ENST00000370203 VSIG10Q8N0Z9 540 aa15.03■□□□□ -0
TMEM56-201ENST00000370203 CCDC158Q5M9N0 1113 aa15.03■□□□□ -0
TMEM56-201ENST00000370203 MNS1Q8NEH6 495 aa15.02■□□□□ -0
TMEM56-201ENST00000370203 MIA2Q96PC5 1412 aa15.02■□□□□ -0
TMEM56-201ENST00000370203 XBP1P17861 261 aa15.02■□□□□ -0
TMEM56-201ENST00000370203 ADAMTS2O95450 1211 aa15.02□□□□□ -0.01
TMEM56-201ENST00000370203 GAPVD1Q14C86 1478 aa15.02□□□□□ -0.01
TMEM56-201ENST00000370203 MPHOSPH10O00566 681 aaKnown RBP15.02□□□□□ -0.01
TMEM56-201ENST00000370203 GPS2Q13227 327 aa15.02□□□□□ -0.01
TMEM56-201ENST00000370203 PDZRN3Q9UPQ7 1066 aa15.02□□□□□ -0.01
TMEM56-201ENST00000370203 SART3Q15020 963 aaKnown RBP15.01□□□□□ -0.01
TMEM56-201ENST00000370203 SLC4A8Q2Y0W8 1093 aa15.01□□□□□ -0.01
TMEM56-201ENST00000370203 PPP2R1AP30153 589 aa15.01□□□□□ -0.01
TMEM56-201ENST00000370203 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
TMEM56-201ENST00000370203 CCDC7Q96M83 1385 aa15□□□□□ -0.01
TMEM56-201ENST00000370203 USP5P45974 858 aa15□□□□□ -0.01
TMEM56-201ENST00000370203 IL1RAPL2Q9NP60 686 aa15□□□□□ -0.01
TMEM56-201ENST00000370203 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
TMEM56-201ENST00000370203 MATR3P43243 847 aaKnown RBP eCLIP15□□□□□ -0.015e-8■■■■■ 27.1
TMEM56-201ENST00000370203 SSBP05455 408 aaKnown RBP eCLIP15□□□□□ -0.01
TMEM56-201ENST00000370203 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
TMEM56-201ENST00000370203 FAM177A1Q8N128 213 aaPredicted RBP15□□□□□ -0.01
TMEM56-201ENST00000370203 PTCD1O75127 700 aaKnown RBP15□□□□□ -0.01
TMEM56-201ENST00000370203 TANGO6Q9C0B7 1094 aa15□□□□□ -0.01
TMEM56-201ENST00000370203 PSMA5P28066 241 aa14.99□□□□□ -0.01
TMEM56-201ENST00000370203 GAS2L2Q8NHY3 880 aa14.99□□□□□ -0.01
TMEM56-201ENST00000370203 WWC2Q6AWC2 1192 aa14.99□□□□□ -0.01
TMEM56-201ENST00000370203 SMG6Q86US8 1419 aaKnown RBP14.99□□□□□ -0.01
TMEM56-201ENST00000370203 TRIM5Q9C035 493 aa14.99□□□□□ -0.01
TMEM56-201ENST00000370203 WWC3Q9ULE0 1092 aa14.99□□□□□ -0.01
TMEM56-201ENST00000370203 BTBD11A6QL63 1104 aa14.99□□□□□ -0.01
TMEM56-201ENST00000370203 SEPT11Q9NVA2 429 aaKnown RBP14.99□□□□□ -0.01
TMEM56-201ENST00000370203 RAI14Q9P0K7 980 aa14.98□□□□□ -0.01
TMEM56-201ENST00000370203 AACSQ86V21 672 aa14.98□□□□□ -0.01
TMEM56-201ENST00000370203 PAXIP1Q6ZW49 1069 aaPredicted RBP14.98□□□□□ -0.01
TMEM56-201ENST00000370203 PRDM11Q9NQV5 511 aa14.98□□□□□ -0.01
TMEM56-201ENST00000370203 ATAD2BQ9ULI0 1458 aa14.98□□□□□ -0.01
TMEM56-201ENST00000370203 CCDC69A6NI79 296 aa14.98□□□□□ -0.01
TMEM56-201ENST00000370203 GNAI2P04899 355 aa14.98□□□□□ -0.01
TMEM56-201ENST00000370203 TRMT1LQ7Z2T5 733 aaKnown RBP14.98□□□□□ -0.01
TMEM56-201ENST00000370203 THUMPD2Q9BTF0 503 aaKnown RBP14.98□□□□□ -0.01
TMEM56-201ENST00000370203 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.98□□□□□ -0.01
TMEM56-201ENST00000370203 CWC27Q6UX04 472 aaKnown RBP14.97□□□□□ -0.01
TMEM56-201ENST00000370203 SLC3A2P08195 630 aaKnown RBP14.97□□□□□ -0.01
TMEM56-201ENST00000370203 NUTM1Q86Y26 1132 aa14.97□□□□□ -0.01
TMEM56-201ENST00000370203 DCTN1Q14203 1278 aa14.97□□□□□ -0.01
TMEM56-201ENST00000370203 CCDC57Q2TAC2 916 aa14.96□□□□□ -0.01
TMEM56-201ENST00000370203 MAGEC2Q9UBF1 373 aaPredicted RBP14.96□□□□□ -0.01
TMEM56-201ENST00000370203 WASHC2AQ641Q2 1341 aa14.96□□□□□ -0.01
TMEM56-201ENST00000370203 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
TMEM56-201ENST00000370203 STK38Q15208 465 aa14.96□□□□□ -0.01
TMEM56-201ENST00000370203 NUCB2P80303 420 aa14.96□□□□□ -0.02
TMEM56-201ENST00000370203 PDCL3Q9H2J4 239 aa14.96□□□□□ -0.02
TMEM56-201ENST00000370203 GNL3LQ9NVN8 582 aaKnown RBP14.95□□□□□ -0.02
TMEM56-201ENST00000370203 NFKBIBQ15653 356 aa14.95□□□□□ -0.02
TMEM56-201ENST00000370203 ABCF2Q9UG63 623 aa14.95□□□□□ -0.02
TMEM56-201ENST00000370203 MYOM3Q5VTT5 1437 aa14.95□□□□□ -0.02
TMEM56-201ENST00000370203 SYCP1Q15431 976 aa14.95□□□□□ -0.02
TMEM56-201ENST00000370203 ANKRD50Q9ULJ7 1429 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms