RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 RBM25P49756 843 aaKnown RBP13.24□□□□□ -0.29
COL11A1-203ENST00000370096 MAP4K4O95819 1239 aaPredicted RBP13.23□□□□□ -0.29
COL11A1-203ENST00000370096 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
COL11A1-203ENST00000370096 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
COL11A1-203ENST00000370096 PPFIBP1Q86W92 1011 aa13.23□□□□□ -0.29
COL11A1-203ENST00000370096 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
COL11A1-203ENST00000370096 ZNHIT6Q9NWK9 470 aaKnown RBP13.23□□□□□ -0.29
COL11A1-203ENST00000370096 FMN1Q68DA7 1419 aa13.23□□□□□ -0.29
COL11A1-203ENST00000370096 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
COL11A1-203ENST00000370096 CUX2O14529 1486 aa13.23□□□□□ -0.29
COL11A1-203ENST00000370096 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
COL11A1-203ENST00000370096 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
COL11A1-203ENST00000370096 STK38Q15208 465 aa13.22□□□□□ -0.29
COL11A1-203ENST00000370096 ANKRD18AQ8IVF6 992 aa13.22□□□□□ -0.29
COL11A1-203ENST00000370096 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
COL11A1-203ENST00000370096 TNMDQ9H2S6 317 aa13.21□□□□□ -0.29
COL11A1-203ENST00000370096 HMGN5P82970 282 aaKnown RBP13.21□□□□□ -0.29
COL11A1-203ENST00000370096 GIMAP7Q8NHV1 300 aa13.21□□□□□ -0.29
COL11A1-203ENST00000370096 GOLGA6L10A0A0M3HER8 536 aa13.21□□□□□ -0.3
COL11A1-203ENST00000370096 TXLNAP40222 546 aa13.21□□□□□ -0.3
COL11A1-203ENST00000370096 UBTFL1P0CB47 393 aaPredicted RBP13.21□□□□□ -0.3
COL11A1-203ENST00000370096 ATP2B2Q01814 1243 aa13.21□□□□□ -0.3
COL11A1-203ENST00000370096 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
COL11A1-203ENST00000370096 GBP2P32456 591 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-203ENST00000370096 EIF3JO75822 258 aaKnown RBP13.2□□□□□ -0.3
COL11A1-203ENST00000370096 ZNF396Q96N95 335 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-203ENST00000370096 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
COL11A1-203ENST00000370096 CBX1P83916 185 aa13.2□□□□□ -0.3
COL11A1-203ENST00000370096 INCENPQ9NQS7 918 aa13.19□□□□□ -0.3
COL11A1-203ENST00000370096 CCDC97Q96F63 343 aaPredicted RBP13.19□□□□□ -0.3
COL11A1-203ENST00000370096 HSP90AB4PQ58FF6 505 aa13.19□□□□□ -0.3
COL11A1-203ENST00000370096 MBD3O95983 291 aa13.19□□□□□ -0.3
COL11A1-203ENST00000370096 RUNDC1Q96C34 613 aa13.19□□□□□ -0.3
COL11A1-203ENST00000370096 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL11A1-203ENST00000370096 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
COL11A1-203ENST00000370096 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
COL11A1-203ENST00000370096 GRPEL1Q9HAV7 217 aa13.18□□□□□ -0.3
COL11A1-203ENST00000370096 ME1P48163 572 aa13.18□□□□□ -0.3
COL11A1-203ENST00000370096 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
COL11A1-203ENST00000370096 ERLIN1O75477 346 aa13.18□□□□□ -0.3
COL11A1-203ENST00000370096 NUTM2GQ5VZR2 741 aa13.18□□□□□ -0.3
COL11A1-203ENST00000370096 GPATCH11Q8N954 259 aa13.18□□□□□ -0.3
COL11A1-203ENST00000370096 NF2P35240 595 aa13.17□□□□□ -0.3
COL11A1-203ENST00000370096 EZRP15311 586 aaKnown RBP13.17□□□□□ -0.3
COL11A1-203ENST00000370096 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
COL11A1-203ENST00000370096 CCDC113Q9H0I3 377 aa13.17□□□□□ -0.3
COL11A1-203ENST00000370096 USP47Q96K76 1375 aa13.17□□□□□ -0.3
COL11A1-203ENST00000370096 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
COL11A1-203ENST00000370096 PSME1Q06323 249 aa13.17□□□□□ -0.3
COL11A1-203ENST00000370096 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
COL11A1-203ENST00000370096 SURF6O75683 361 aaKnown RBP13.16□□□□□ -0.3
COL11A1-203ENST00000370096 KIF7Q2M1P5 1343 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 MAP2K1Q02750 393 aaPredicted RBP13.15□□□□□ -0.3
COL11A1-203ENST00000370096 CFAP45Q9UL16 551 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 RABEP1Q15276 862 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 PDZRN3Q9UPQ7 1066 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 CCDC144AA2RUR9 1427 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 TTC39AQ5SRH9 613 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 USP8P40818 1118 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 MATR3P43243 847 aaKnown RBP eCLIP13.15□□□□□ -0.3
COL11A1-203ENST00000370096 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
COL11A1-203ENST00000370096 PIBF1Q8WXW3 757 aa13.14□□□□□ -0.31
COL11A1-203ENST00000370096 FILIP1Q7Z7B0 1213 aa13.14□□□□□ -0.31
COL11A1-203ENST00000370096 NUP133Q8WUM0 1156 aa13.14□□□□□ -0.31
COL11A1-203ENST00000370096 GNAI1P63096 354 aa13.14□□□□□ -0.31
COL11A1-203ENST00000370096 PDCL2Q8N4E4 241 aa13.14□□□□□ -0.31
COL11A1-203ENST00000370096 ZFP91Q96JP5 570 aaPredicted RBP13.13□□□□□ -0.31
COL11A1-203ENST00000370096 BCCIPQ9P287 314 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL11A1-203ENST00000370096 STIM1Q13586 685 aa13.13□□□□□ -0.31
COL11A1-203ENST00000370096 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
COL11A1-203ENST00000370096 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL11A1-203ENST00000370096 CAMK4Q16566 473 aa13.13□□□□□ -0.31
COL11A1-203ENST00000370096 LUC7LQ9NQ29 371 aaKnown RBP13.13□□□□□ -0.31
COL11A1-203ENST00000370096 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
COL11A1-203ENST00000370096 PIP4K2AP48426 406 aaPredicted RBP13.12□□□□□ -0.31
COL11A1-203ENST00000370096 TMCO3Q6UWJ1 677 aa13.12□□□□□ -0.31
COL11A1-203ENST00000370096 SIL1Q9H173 461 aa13.12□□□□□ -0.31
COL11A1-203ENST00000370096 DACH1Q9UI36 760 aa13.12□□□□□ -0.31
COL11A1-203ENST00000370096 POLR3GO15318 223 aaPredicted RBP13.12□□□□□ -0.31
COL11A1-203ENST00000370096 NEBLO76041 1014 aa13.12□□□□□ -0.31
COL11A1-203ENST00000370096 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
COL11A1-203ENST00000370096 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
COL11A1-203ENST00000370096 PDCP20941 246 aa13.11□□□□□ -0.31
COL11A1-203ENST00000370096 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
COL11A1-203ENST00000370096 RNF187Q5TA31 235 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-203ENST00000370096 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
COL11A1-203ENST00000370096 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
COL11A1-203ENST00000370096 CEP63Q96MT8 703 aa13.1□□□□□ -0.31
COL11A1-203ENST00000370096 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
COL11A1-203ENST00000370096 LARP1BQ659C4 914 aaKnown RBP13.1□□□□□ -0.31
COL11A1-203ENST00000370096 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
COL11A1-203ENST00000370096 PRKCSHP14314 528 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-203ENST00000370096 DNA2P51530 1060 aa13.1□□□□□ -0.31
COL11A1-203ENST00000370096 SLC26A8Q96RN1 970 aa13.1□□□□□ -0.31
COL11A1-203ENST00000370096 UBE4AQ14139 1066 aa13.1□□□□□ -0.31
COL11A1-203ENST00000370096 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
COL11A1-203ENST00000370096 SPATA32Q96LK8 384 aa13.09□□□□□ -0.31
COL11A1-203ENST00000370096 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
COL11A1-203ENST00000370096 RRP9O43818 475 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms