RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 VPS72Q15906 364 aa29.19■■■□□ 2.26
CUEDC2-201ENST00000369937 NBPF8Q3BBV2 869 aa29.19■■■□□ 2.26
CUEDC2-201ENST00000369937 PLEKHG3A1L390 1219 aa29.18■■■□□ 2.26
CUEDC2-201ENST00000369937 PLCH1Q4KWH8 1693 aa29.18■■■□□ 2.26
CUEDC2-201ENST00000369937 NWD2Q9ULI1 1742 aa29.17■■■□□ 2.26
CUEDC2-201ENST00000369937 TRIM26Q12899 539 aaPredicted RBP29.17■■■□□ 2.26
CUEDC2-201ENST00000369937 CABP2Q9NPB3 220 aa29.17■■■□□ 2.26
CUEDC2-201ENST00000369937 POLR3AO14802 1390 aaPredicted RBP29.16■■■□□ 2.26
CUEDC2-201ENST00000369937 BTG4Q9NY30 223 aa29.16■■■□□ 2.26
CUEDC2-201ENST00000369937 TRPM1Q7Z4N2 1603 aa29.16■■■□□ 2.26
CUEDC2-201ENST00000369937 QRICH2Q9H0J4 1663 aa29.15■■■□□ 2.26
CUEDC2-201ENST00000369937 TOPAZ1Q8N9V7 1692 aa29.15■■■□□ 2.26
CUEDC2-201ENST00000369937 PPIP5K1Q6PFW1 1433 aa29.14■■■□□ 2.26
CUEDC2-201ENST00000369937 GLI3P10071 1580 aa29.13■■■□□ 2.25
CUEDC2-201ENST00000369937 PRDM11Q9NQV5 511 aa29.13■■■□□ 2.25
CUEDC2-201ENST00000369937 NUTM2GQ5VZR2 741 aa29.12■■■□□ 2.25
CUEDC2-201ENST00000369937 EVC2Q86UK5 1308 aa29.12■■■□□ 2.25
CUEDC2-201ENST00000369937 ABTB2Q8N961 1025 aa29.11■■■□□ 2.25
CUEDC2-201ENST00000369937 COL14A1Q05707 1796 aaKnown RBP29.11■■■□□ 2.25
CUEDC2-201ENST00000369937 A0A0G2JS52 829 aa29.1■■■□□ 2.25
CUEDC2-201ENST00000369937 MYT1Q01538 1121 aa29.1■■■□□ 2.25
CUEDC2-201ENST00000369937 SEPT12Q8IYM1 358 aa29.1■■■□□ 2.25
CUEDC2-201ENST00000369937 TONSLQ96HA7 1378 aa29.1■■■□□ 2.25
CUEDC2-201ENST00000369937 CCDC125Q86Z20 511 aa29.08■■■□□ 2.25
CUEDC2-201ENST00000369937 CABP1Q9NZU7 370 aa29.07■■■□□ 2.24
CUEDC2-201ENST00000369937 ZC3H6P61129 1189 aaKnown RBP29.05■■■□□ 2.24
CUEDC2-201ENST00000369937 KIAA0232Q92628 1395 aa29.04■■■□□ 2.24
CUEDC2-201ENST00000369937 CRYBG1Q9Y4K1 1723 aa29.04■■■□□ 2.24
CUEDC2-201ENST00000369937 ONECUT3O60422 494 aaPredicted RBP29.04■■■□□ 2.24
CUEDC2-201ENST00000369937 NLRP13Q86W25 1043 aa29.04■■■□□ 2.24
CUEDC2-201ENST00000369937 BRD4O60885 1362 aaPredicted RBP29.03■■■□□ 2.24
CUEDC2-201ENST00000369937 CARD11Q9BXL7 1154 aa29.03■■■□□ 2.24
CUEDC2-201ENST00000369937 CHRNA2Q15822 529 aa29.02■■■□□ 2.24
CUEDC2-201ENST00000369937 NRAPQ86VF7 1730 aa29.01■■■□□ 2.23
CUEDC2-201ENST00000369937 FAM98CQ17RN3 349 aaKnown RBP29.01■■■□□ 2.23
CUEDC2-201ENST00000369937 PHRF1Q9P1Y6 1649 aaKnown RBP29.01■■■□□ 2.23
CUEDC2-201ENST00000369937 KRT27Q7Z3Y8 459 aa29■■■□□ 2.23
CUEDC2-201ENST00000369937 STRN4Q9NRL3 753 aa28.99■■■□□ 2.23
CUEDC2-201ENST00000369937 EVA1CP58658 441 aa28.98■■■□□ 2.23
CUEDC2-201ENST00000369937 SPATA31A5Q5VU36 1347 aa28.97■■■□□ 2.23
CUEDC2-201ENST00000369937 SPATA31A7Q8IWB4 1347 aa28.97■■■□□ 2.23
CUEDC2-201ENST00000369937 SF3B2Q13435 895 aaKnown RBP28.97■■■□□ 2.23
CUEDC2-201ENST00000369937 USP6P35125 1406 aa28.96■■■□□ 2.23
CUEDC2-201ENST00000369937 BRWD3Q6RI45 1802 aa28.96■■■□□ 2.23
CUEDC2-201ENST00000369937 NLRP6P59044 892 aa28.95■■■□□ 2.22
CUEDC2-201ENST00000369937 ZNF692Q9BU19 519 aaPredicted RBP28.95■■■□□ 2.22
CUEDC2-201ENST00000369937 USP19O94966 1318 aa28.94■■■□□ 2.22
CUEDC2-201ENST00000369937 GCP02774 474 aa28.94■■■□□ 2.22
CUEDC2-201ENST00000369937 BLMP54132 1417 aaPredicted RBP28.94■■■□□ 2.22
CUEDC2-201ENST00000369937 NRKQ7Z2Y5 1582 aa28.92■■■□□ 2.22
CUEDC2-201ENST00000369937 CPDO75976 1380 aa28.9■■■□□ 2.22
CUEDC2-201ENST00000369937 ZBTB7CA1YPR0 619 aa28.89■■■□□ 2.22
CUEDC2-201ENST00000369937 USP35Q9P2H5 1018 aa28.89■■■□□ 2.22
CUEDC2-201ENST00000369937 SPATA31A1Q5TZJ5 1347 aa28.89■■■□□ 2.21
CUEDC2-201ENST00000369937 EP400Q96L91 3159 aa28.89■■■□□ 2.21
CUEDC2-201ENST00000369937 SBNO2Q9Y2G9 1366 aa28.88■■■□□ 2.21
CUEDC2-201ENST00000369937 ZRANB1Q9UGI0 708 aa28.88■■■□□ 2.21
CUEDC2-201ENST00000369937 SSH2Q76I76 1423 aa28.85■■■□□ 2.21
CUEDC2-201ENST00000369937 TTC21BQ7Z4L5 1316 aa28.84■■■□□ 2.21
CUEDC2-201ENST00000369937 KTN1Q86UP2 1357 aaKnown RBP28.84■■■□□ 2.21
CUEDC2-201ENST00000369937 TMC1Q8TDI8 760 aa28.83■■■□□ 2.21
CUEDC2-201ENST00000369937 TTC21AQ8NDW8 1320 aa28.83■■■□□ 2.21
CUEDC2-201ENST00000369937 LARP1Q6PKG0 1096 aaKnown RBP28.82■■■□□ 2.2
CUEDC2-201ENST00000369937 CAMTA1Q9Y6Y1 1673 aa28.82■■■□□ 2.2
CUEDC2-201ENST00000369937 KCNH5Q8NCM2 988 aa28.81■■■□□ 2.2
CUEDC2-201ENST00000369937 DEFB132Q7Z7B7 95 aa28.8■■■□□ 2.2
CUEDC2-201ENST00000369937 CPSF1Q10570 1443 aaKnown RBP28.79■■■□□ 2.2
CUEDC2-201ENST00000369937 BARGINQ6ZT62 677 aa28.79■■■□□ 2.2
CUEDC2-201ENST00000369937 TCP11L2Q8N4U5 519 aa28.79■■■□□ 2.2
CUEDC2-201ENST00000369937 PIK3C2AO00443 1686 aa28.79■■■□□ 2.2
CUEDC2-201ENST00000369937 SLIT3O75094 1523 aa28.79■■■□□ 2.2
CUEDC2-201ENST00000369937 AKAP12Q02952 1782 aa28.78■■■□□ 2.2
CUEDC2-201ENST00000369937 LMO7Q8WWI1 1683 aa28.78■■■□□ 2.2
CUEDC2-201ENST00000369937 THSD7AQ9UPZ6 1657 aa28.78■■■□□ 2.2
CUEDC2-201ENST00000369937 SLC24A1O60721 1099 aa28.78■■■□□ 2.2
CUEDC2-201ENST00000369937 BAG6P46379 1132 aa28.78■■■□□ 2.2
CUEDC2-201ENST00000369937 FAM182BQ5T319 152 aa28.78■■■□□ 2.2
CUEDC2-201ENST00000369937 HDGFL2Q7Z4V5 671 aaPredicted RBP28.78■■■□□ 2.2
CUEDC2-201ENST00000369937 AATKQ6ZMQ8 1374 aa28.76■■■□□ 2.2
CUEDC2-201ENST00000369937 SOX12O15370 315 aa28.76■■■□□ 2.19
CUEDC2-201ENST00000369937 PDE3BQ13370 1112 aa28.76■■■□□ 2.19
CUEDC2-201ENST00000369937 THRAP3Q9Y2W1 955 aaKnown RBP28.76■■■□□ 2.19
CUEDC2-201ENST00000369937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.75■■■□□ 2.19
CUEDC2-201ENST00000369937 COL5A2P05997 1499 aaPredicted RBP28.74■■■□□ 2.19
CUEDC2-201ENST00000369937 TERF2IPQ9NYB0 399 aa28.74■■■□□ 2.19
CUEDC2-201ENST00000369937 ST20-MTHFSA0A0A6YYL1 179 aa28.73■■■□□ 2.19
CUEDC2-201ENST00000369937 FAM196AQ6ZSG2 479 aa28.73■■■□□ 2.19
CUEDC2-201ENST00000369937 PUS7Q96PZ0 661 aaKnown RBP28.73■■■□□ 2.19
CUEDC2-201ENST00000369937 SLC12A5Q9H2X9 1139 aa28.72■■■□□ 2.19
CUEDC2-201ENST00000369937 CRB1P82279 1406 aa28.71■■■□□ 2.19
CUEDC2-201ENST00000369937 TOM1L2Q6ZVM7 507 aa28.71■■■□□ 2.19
CUEDC2-201ENST00000369937 PCGF6Q9BYE7 350 aa28.7■■■□□ 2.18
CUEDC2-201ENST00000369937 ARHGEF25Q86VW2 580 aa28.69■■■□□ 2.18
CUEDC2-201ENST00000369937 MON2Q7Z3U7 1717 aa28.69■■■□□ 2.18
CUEDC2-201ENST00000369937 RGPD1P0DJD0 1748 aa28.67■■■□□ 2.18
CUEDC2-201ENST00000369937 CSB-PGBD3P0DP91 1061 aa28.67■■■□□ 2.18
CUEDC2-201ENST00000369937 NME9Q86XW9 330 aa28.65■■■□□ 2.18
CUEDC2-201ENST00000369937 TESK2Q96S53 571 aa28.65■■■□□ 2.18
CUEDC2-201ENST00000369937 AXIN2Q9Y2T1 843 aa28.65■■■□□ 2.18
CUEDC2-201ENST00000369937 CD163L1Q9NR16 1453 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms