RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 PTPN23Q9H3S7 1636 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 LRRFIP2Q9Y608 721 aaKnown RBP10.2□□□□□ -0.78
LCA5-201ENST00000369846 DENND4BO75064 1496 aaPredicted RBP10.2□□□□□ -0.78
LCA5-201ENST00000369846 PLEKHD1A6NEE1 506 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 CEBPZQ03701 1054 aaKnown RBP10.2□□□□□ -0.78
LCA5-201ENST00000369846 CHMP4CQ96CF2 233 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 PANK3Q9H999 370 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 SERPINC1P01008 464 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
LCA5-201ENST00000369846 TRIM29Q14134 588 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 KRT222Q8N1A0 295 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 URI1O94763 535 aaPredicted RBP10.19□□□□□ -0.78
LCA5-201ENST00000369846 C10orf67Q8IYJ2 551 aa10.19□□□□□ -0.78
LCA5-201ENST00000369846 PHF23Q9BUL5 403 aaPredicted RBP10.19□□□□□ -0.78
LCA5-201ENST00000369846 ZNF330Q9Y3S2 320 aaPredicted RBP10.19□□□□□ -0.78
LCA5-201ENST00000369846 K7ELQ4 463 aaPredicted RBP10.19□□□□□ -0.78
LCA5-201ENST00000369846 NEXNQ0ZGT2 675 aa10.19□□□□□ -0.78
LCA5-201ENST00000369846 ZRSR2Q15696 482 aaKnown RBP10.19□□□□□ -0.78
LCA5-201ENST00000369846 TNMDQ9H2S6 317 aa10.19□□□□□ -0.78
LCA5-201ENST00000369846 RABEP1Q15276 862 aa10.19□□□□□ -0.78
LCA5-201ENST00000369846 USP25Q9UHP3 1055 aa10.19□□□□□ -0.78
LCA5-201ENST00000369846 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.19□□□□□ -0.78
LCA5-201ENST00000369846 MAP3K1Q13233 1512 aa10.19□□□□□ -0.78
LCA5-201ENST00000369846 DDX11Q96FC9 970 aa10.19□□□□□ -0.78
LCA5-201ENST00000369846 CIZ1Q9ULV3 898 aaPredicted RBP10.19□□□□□ -0.78
LCA5-201ENST00000369846 FGD5Q6ZNL6 1462 aa10.18□□□□□ -0.78
LCA5-201ENST00000369846 SMAP1Q8IYB5 467 aaPredicted RBP10.18□□□□□ -0.78
LCA5-201ENST00000369846 KDM6BO15054 1643 aa10.18□□□□□ -0.78
LCA5-201ENST00000369846 CLASRPQ8N2M8 674 aaKnown RBP10.18□□□□□ -0.78
LCA5-201ENST00000369846 TRMT1Q9NXH9 659 aaKnown RBP10.18□□□□□ -0.78
LCA5-201ENST00000369846 GOLGA6L10A0A0M3HER8 536 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 CCDC94Q9BW85 323 aaPredicted RBP10.17□□□□□ -0.78
LCA5-201ENST00000369846 CFTRP13569 1480 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 CLGNO14967 610 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 NF2P35240 595 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 BMS1Q14692 1282 aaKnown RBP10.17□□□□□ -0.78
LCA5-201ENST00000369846 ENOX2Q16206 610 aaKnown RBP10.17□□□□□ -0.78
LCA5-201ENST00000369846 SRRTQ9BXP5 876 aaKnown RBP10.17□□□□□ -0.78
LCA5-201ENST00000369846 HDAC5Q9UQL6 1122 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 RAD54L2Q9Y4B4 1467 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 GBP2P32456 591 aaPredicted RBP10.17□□□□□ -0.78
LCA5-201ENST00000369846 FAM107BQ9H098 131 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 CFAP43Q8NDM7 1665 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 NCOA1Q15788 1441 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 NCOA2Q15596 1464 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 SSR1P43307 286 aaKnown RBP10.17□□□□□ -0.78
LCA5-201ENST00000369846 VPS53Q5VIR6 699 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 CCDC47Q96A33 483 aaKnown RBP10.17□□□□□ -0.78
LCA5-201ENST00000369846 PRIMPOLQ96LW4 560 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 FMN1Q68DA7 1419 aa10.17□□□□□ -0.78
LCA5-201ENST00000369846 TMX1Q9H3N1 280 aa10.16□□□□□ -0.78
LCA5-201ENST00000369846 RSPH14Q9UHP6 348 aa10.16□□□□□ -0.78
LCA5-201ENST00000369846 SMARCE1Q969G3 411 aa10.16□□□□□ -0.78
LCA5-201ENST00000369846 CWC22Q9HCG8 908 aaKnown RBP10.16□□□□□ -0.78
LCA5-201ENST00000369846 HSP90AB2PQ58FF8 381 aa10.16□□□□□ -0.78
LCA5-201ENST00000369846 RRAGDQ9NQL2 400 aaPredicted RBP10.16□□□□□ -0.78
LCA5-201ENST00000369846 SPAG9O60271 1321 aaKnown RBP10.16□□□□□ -0.78
LCA5-201ENST00000369846 SMARCC1Q92922 1105 aaPredicted RBP10.15□□□□□ -0.78
LCA5-201ENST00000369846 STK26Q9P289 416 aa10.15□□□□□ -0.78
LCA5-201ENST00000369846 KIF20AO95235 890 aa10.15□□□□□ -0.78
LCA5-201ENST00000369846 CCDC181Q5TID7 509 aa10.15□□□□□ -0.78
LCA5-201ENST00000369846 JAKMIP3Q5VZ66 844 aa10.15□□□□□ -0.78
LCA5-201ENST00000369846 FILIP1LQ4L180 1135 aa10.15□□□□□ -0.79
LCA5-201ENST00000369846 RASSF4Q9H2L5 321 aa10.15□□□□□ -0.79
LCA5-201ENST00000369846 KIF2AO00139 706 aaPredicted RBP10.14□□□□□ -0.79
LCA5-201ENST00000369846 ATP2B1P20020 1258 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 MCM5P33992 734 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 GBP3Q9H0R5 595 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 MYO6Q9UM54 1294 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 ANKRD62A6NC57 917 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 TXLNBQ8N3L3 684 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 SMG6Q86US8 1419 aaKnown RBP10.14□□□□□ -0.79
LCA5-201ENST00000369846 MCM2P49736 904 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 PPFIBP1Q86W92 1011 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 MICALL1Q8N3F8 863 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 ZNF830Q96NB3 372 aaPredicted RBP10.14□□□□□ -0.79
LCA5-201ENST00000369846 WDR33Q9C0J8 1336 aaKnown RBP10.14□□□□□ -0.79
LCA5-201ENST00000369846 CASKIN1Q8WXD9 1431 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 FAM177BA6PVY3 158 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 PDCP20941 246 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 CTR9Q6PD62 1173 aa10.14□□□□□ -0.79
LCA5-201ENST00000369846 HDGFL2Q7Z4V5 671 aaPredicted RBP10.14□□□□□ -0.79
LCA5-201ENST00000369846 ZFYVE27Q5T4F4 411 aa10.13□□□□□ -0.79
LCA5-201ENST00000369846 ZNF644Q9H582 1327 aaPredicted RBP10.13□□□□□ -0.79
LCA5-201ENST00000369846 SFPQP23246 707 aaKnown RBP eCLIP10.13□□□□□ -0.79
LCA5-201ENST00000369846 SARNPP82979 210 aaKnown RBP10.13□□□□□ -0.79
LCA5-201ENST00000369846 CEP57Q86XR8 500 aa10.13□□□□□ -0.79
LCA5-201ENST00000369846 NUP62CLQ9H1M0 184 aa10.13□□□□□ -0.79
LCA5-201ENST00000369846 CFAP45Q9UL16 551 aa10.13□□□□□ -0.79
LCA5-201ENST00000369846 TTC31Q49AM3 519 aaPredicted RBP10.13□□□□□ -0.79
LCA5-201ENST00000369846 ARHGAP29Q52LW3 1261 aa10.13□□□□□ -0.79
LCA5-201ENST00000369846 KRT85P78386 507 aa10.12□□□□□ -0.79
LCA5-201ENST00000369846 RBM33Q96EV2 1170 aaKnown RBP10.12□□□□□ -0.79
LCA5-201ENST00000369846 FYCO1Q9BQS8 1478 aa10.12□□□□□ -0.79
LCA5-201ENST00000369846 KDM4AO75164 1064 aa10.12□□□□□ -0.79
LCA5-201ENST00000369846 ZBTB9Q96C00 473 aa10.12□□□□□ -0.79
LCA5-201ENST00000369846 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.12□□□□□ -0.79
LCA5-201ENST00000369846 V9GYY5 206 aaPredicted RBP10.12□□□□□ -0.79
LCA5-201ENST00000369846 ERLIN2O94905 339 aa10.12□□□□□ -0.79
LCA5-201ENST00000369846 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms