RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 SBNO2Q9Y2G9 1366 aa13.7□□□□□ -0.22
LRIF1-201ENST00000369763 GOLGA6L3A6NEY3 463 aa13.7□□□□□ -0.22
LRIF1-201ENST00000369763 TRAK2O60296 914 aa13.7□□□□□ -0.22
LRIF1-201ENST00000369763 HSP90AB1P08238 724 aaKnown RBP13.7□□□□□ -0.22
LRIF1-201ENST00000369763 XRCC6P12956 609 aaKnown RBP eCLIP13.7□□□□□ -0.22
LRIF1-201ENST00000369763 EMILIN1Q9Y6C2 1016 aa13.7□□□□□ -0.22
LRIF1-201ENST00000369763 EFCAB6Q5THR3 1501 aa13.7□□□□□ -0.22
LRIF1-201ENST00000369763 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
LRIF1-201ENST00000369763 ATAD2Q6PL18 1390 aa13.7□□□□□ -0.22
LRIF1-201ENST00000369763 FAM83GA6ND36 823 aa13.7□□□□□ -0.22
LRIF1-201ENST00000369763 ZBTB40Q9NUA8 1239 aa13.69□□□□□ -0.22
LRIF1-201ENST00000369763 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
LRIF1-201ENST00000369763 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
LRIF1-201ENST00000369763 UHRF1BP1LA0JNW5 1464 aa13.69□□□□□ -0.22
LRIF1-201ENST00000369763 MROH1Q8NDA8 1641 aa13.69□□□□□ -0.22
LRIF1-201ENST00000369763 KIF1BO60333 1816 aa13.69□□□□□ -0.22
LRIF1-201ENST00000369763 RRS1Q15050 365 aaKnown RBP13.68□□□□□ -0.22
LRIF1-201ENST00000369763 CHMP5Q9NZZ3 219 aa13.68□□□□□ -0.22
LRIF1-201ENST00000369763 IPO8O15397 1037 aaKnown RBP13.67□□□□□ -0.22
LRIF1-201ENST00000369763 CHD1LQ86WJ1 897 aa13.67□□□□□ -0.22
LRIF1-201ENST00000369763 CD2BP2O95400 341 aaKnown RBP13.67□□□□□ -0.22
LRIF1-201ENST00000369763 INO80Q9ULG1 1556 aaPredicted RBP13.67□□□□□ -0.22
LRIF1-201ENST00000369763 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
LRIF1-201ENST00000369763 SHPRHQ149N8 1683 aa13.67□□□□□ -0.22
LRIF1-201ENST00000369763 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
LRIF1-201ENST00000369763 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
LRIF1-201ENST00000369763 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
LRIF1-201ENST00000369763 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
LRIF1-201ENST00000369763 L1TD1Q5T7N2 865 aaKnown RBP13.65□□□□□ -0.22
LRIF1-201ENST00000369763 NME9Q86XW9 330 aa13.65□□□□□ -0.22
LRIF1-201ENST00000369763 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
LRIF1-201ENST00000369763 TULP4Q9NRJ4 1543 aa13.65□□□□□ -0.22
LRIF1-201ENST00000369763 RPGRIP1LQ68CZ1 1315 aa13.65□□□□□ -0.22
LRIF1-201ENST00000369763 AAMPQ13685 434 aa13.65□□□□□ -0.23
LRIF1-201ENST00000369763 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.23
LRIF1-201ENST00000369763 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
LRIF1-201ENST00000369763 ADGRB1O14514 1584 aa13.64□□□□□ -0.23
LRIF1-201ENST00000369763 NUCB1Q02818 461 aa13.64□□□□□ -0.23
LRIF1-201ENST00000369763 POLKQ9UBT6 870 aa13.64□□□□□ -0.23
LRIF1-201ENST00000369763 NRXN1Q9ULB1 1477 aa13.63□□□□□ -0.23
LRIF1-201ENST00000369763 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
LRIF1-201ENST00000369763 ADGRB3O60242 1522 aa13.63□□□□□ -0.23
LRIF1-201ENST00000369763 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
LRIF1-201ENST00000369763 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
LRIF1-201ENST00000369763 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
LRIF1-201ENST00000369763 TNPO1Q92973 898 aaKnown RBP13.63□□□□□ -0.23
LRIF1-201ENST00000369763 KIDINS220Q9ULH0 1771 aa13.63□□□□□ -0.23
LRIF1-201ENST00000369763 ABCC11Q96J66 1382 aa13.62□□□□□ -0.23
LRIF1-201ENST00000369763 MBIPQ9NS73 344 aa13.62□□□□□ -0.23
LRIF1-201ENST00000369763 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
LRIF1-201ENST00000369763 TXNDC2Q86VQ3 553 aa13.61□□□□□ -0.23
LRIF1-201ENST00000369763 RSPH6AQ9H0K4 717 aa13.61□□□□□ -0.23
LRIF1-201ENST00000369763 VAMP4O75379 141 aa13.61□□□□□ -0.23
LRIF1-201ENST00000369763 KIAA1210Q9ULL0 1709 aa13.61□□□□□ -0.23
LRIF1-201ENST00000369763 ZBTB7BO15156 539 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-201ENST00000369763 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
LRIF1-201ENST00000369763 TWISTNBQ3B726 338 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-201ENST00000369763 SIRT2Q8IXJ6 389 aa13.6□□□□□ -0.23
LRIF1-201ENST00000369763 ABCA9Q8IUA7 1624 aa13.6□□□□□ -0.23
LRIF1-201ENST00000369763 FCHSD2O94868 740 aa13.6□□□□□ -0.23
LRIF1-201ENST00000369763 CT47B1P0C2W7 299 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-201ENST00000369763 MIS18AQ9NYP9 233 aa13.6□□□□□ -0.23
LRIF1-201ENST00000369763 SMARCA5O60264 1052 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-201ENST00000369763 FOXD4L5Q5VV16 416 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-201ENST00000369763 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-201ENST00000369763 FOXD4L4Q8WXT5 416 aaPredicted RBP13.6□□□□□ -0.23
LRIF1-201ENST00000369763 GLI2P10070 1586 aa13.59□□□□□ -0.23
LRIF1-201ENST00000369763 NSD2O96028 1365 aa13.59□□□□□ -0.23
LRIF1-201ENST00000369763 AEBP1Q8IUX7 1158 aa13.59□□□□□ -0.23
LRIF1-201ENST00000369763 SSFA2P28290 1259 aa13.58□□□□□ -0.24
LRIF1-201ENST00000369763 NFE2L2Q16236 605 aa13.58□□□□□ -0.24
LRIF1-201ENST00000369763 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
LRIF1-201ENST00000369763 TPRNQ4KMQ1 711 aa13.58□□□□□ -0.24
LRIF1-201ENST00000369763 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.24
LRIF1-201ENST00000369763 GAS2L3Q86XJ1 694 aa13.58□□□□□ -0.24
LRIF1-201ENST00000369763 MCM10Q7L590 875 aa13.57□□□□□ -0.24
LRIF1-201ENST00000369763 CHAMP1Q96JM3 812 aa13.57□□□□□ -0.24
LRIF1-201ENST00000369763 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
LRIF1-201ENST00000369763 ARAP3Q8WWN8 1544 aa13.57□□□□□ -0.24
LRIF1-201ENST00000369763 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
LRIF1-201ENST00000369763 PNNQ9H307 717 aaKnown RBP13.57□□□□□ -0.24
LRIF1-201ENST00000369763 GRPEL1Q9HAV7 217 aa13.57□□□□□ -0.24
LRIF1-201ENST00000369763 SLC52A1Q9NWF4 448 aa13.57□□□□□ -0.24
LRIF1-201ENST00000369763 PPIP5K1Q6PFW1 1433 aa13.57□□□□□ -0.24
LRIF1-201ENST00000369763 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
LRIF1-201ENST00000369763 SLC4A10Q6U841 1118 aa13.56□□□□□ -0.24
LRIF1-201ENST00000369763 KIF2CQ99661 725 aa13.56□□□□□ -0.24
LRIF1-201ENST00000369763 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
LRIF1-201ENST00000369763 ABCC3O15438 1527 aa13.56□□□□□ -0.24
LRIF1-201ENST00000369763 ALDH1L2Q3SY69 923 aa13.55□□□□□ -0.24
LRIF1-201ENST00000369763 BMP2KLQ5H9B9 411 aa13.55□□□□□ -0.24
LRIF1-201ENST00000369763 TSHZ3Q63HK5 1081 aa13.55□□□□□ -0.24
LRIF1-201ENST00000369763 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
LRIF1-201ENST00000369763 NOL8Q76FK4 1167 aaKnown RBP13.55□□□□□ -0.24
LRIF1-201ENST00000369763 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
LRIF1-201ENST00000369763 YTHDC2Q9H6S0 1430 aaKnown RBP13.55□□□□□ -0.24
LRIF1-201ENST00000369763 FRMPD1Q5SYB0 1578 aa13.55□□□□□ -0.24
LRIF1-201ENST00000369763 SETBP1Q9Y6X0 1596 aa13.55□□□□□ -0.24
LRIF1-201ENST00000369763 DDX11L8A8MPP1 907 aa13.55□□□□□ -0.24
LRIF1-201ENST00000369763 GNAI1P63096 354 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms