RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 ZSCAN23Q3MJ62 389 aa17.81■□□□□ 0.44
PHTF1-204ENST00000369604 MYOM1P52179 1685 aa17.8■□□□□ 0.44
PHTF1-204ENST00000369604 RBSNQ9H1K0 784 aa17.8■□□□□ 0.44
PHTF1-204ENST00000369604 C1orf115Q9H7X2 142 aa17.8■□□□□ 0.44
PHTF1-204ENST00000369604 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
PHTF1-204ENST00000369604 TERF1P54274 439 aa17.79■□□□□ 0.44
PHTF1-204ENST00000369604 NOL7Q9UMY1 257 aaKnown RBP17.79■□□□□ 0.44
PHTF1-204ENST00000369604 MAST1Q9Y2H9 1570 aa17.78■□□□□ 0.44
PHTF1-204ENST00000369604 PRPF40AO75400 957 aaKnown RBP17.78■□□□□ 0.44
PHTF1-204ENST00000369604 PRIM1P49642 420 aaKnown RBP17.78■□□□□ 0.44
PHTF1-204ENST00000369604 PTMAP06454 111 aaKnown RBP17.77■□□□□ 0.44
PHTF1-204ENST00000369604 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.44
PHTF1-204ENST00000369604 ZNF445P59923 1031 aa17.77■□□□□ 0.43
PHTF1-204ENST00000369604 NUCB2P80303 420 aa17.77■□□□□ 0.43
PHTF1-204ENST00000369604 PRDM10Q9NQV6 1147 aa17.77■□□□□ 0.43
PHTF1-204ENST00000369604 RBM27Q9P2N5 1060 aaKnown RBP17.77■□□□□ 0.43
PHTF1-204ENST00000369604 KANK1Q14678 1352 aa17.76■□□□□ 0.43
PHTF1-204ENST00000369604 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
PHTF1-204ENST00000369604 KIF16BQ96L93 1317 aa17.76■□□□□ 0.43
PHTF1-204ENST00000369604 CDC42BPBQ9Y5S2 1711 aa17.76■□□□□ 0.43
PHTF1-204ENST00000369604 TMPOP42166 694 aaKnown RBP17.76■□□□□ 0.43
PHTF1-204ENST00000369604 CSPP1Q1MSJ5 1256 aa17.76■□□□□ 0.43
PHTF1-204ENST00000369604 HS1BP3Q53T59 392 aa17.76■□□□□ 0.43
PHTF1-204ENST00000369604 DNTTIP2Q5QJE6 756 aaKnown RBP17.76■□□□□ 0.43
PHTF1-204ENST00000369604 PRDM4Q9UKN5 801 aa17.76■□□□□ 0.43
PHTF1-204ENST00000369604 IQSEC2Q5JU85 1478 aa17.76■□□□□ 0.43
PHTF1-204ENST00000369604 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
PHTF1-204ENST00000369604 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
PHTF1-204ENST00000369604 ZNF500O60304 480 aaPredicted RBP17.74■□□□□ 0.43
PHTF1-204ENST00000369604 RNF214Q8ND24 703 aa17.74■□□□□ 0.43
PHTF1-204ENST00000369604 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
PHTF1-204ENST00000369604 IBTKQ9P2D0 1353 aaPredicted RBP17.74■□□□□ 0.43
PHTF1-204ENST00000369604 ZKSCAN5Q9Y2L8 839 aa17.74■□□□□ 0.43
PHTF1-204ENST00000369604 CDC45O75419 566 aa17.74■□□□□ 0.43
PHTF1-204ENST00000369604 PKP1Q13835 747 aa17.73■□□□□ 0.43
PHTF1-204ENST00000369604 LMBRD1Q9NUN5 540 aa17.73■□□□□ 0.43
PHTF1-204ENST00000369604 AFAP1Q8N556 730 aa17.73■□□□□ 0.43
PHTF1-204ENST00000369604 PREX2Q70Z35 1606 aa17.73■□□□□ 0.43
PHTF1-204ENST00000369604 MTERF4Q7Z6M4 381 aaKnown RBP17.72■□□□□ 0.43
PHTF1-204ENST00000369604 GCC1Q96CN9 775 aa17.72■□□□□ 0.43
PHTF1-204ENST00000369604 CEP152O94986 1710 aa17.72■□□□□ 0.43
PHTF1-204ENST00000369604 SPAG9O60271 1321 aaKnown RBP17.72■□□□□ 0.43
PHTF1-204ENST00000369604 A0A0U1RQG5 324 aaPredicted RBP17.72■□□□□ 0.43
PHTF1-204ENST00000369604 DYNC1I1O14576 645 aa17.72■□□□□ 0.43
PHTF1-204ENST00000369604 RABEP1Q15276 862 aa17.72■□□□□ 0.43
PHTF1-204ENST00000369604 EFCAB2Q5VUJ9 269 aa17.72■□□□□ 0.43
PHTF1-204ENST00000369604 SYCE3A1L190 88 aa17.71■□□□□ 0.43
PHTF1-204ENST00000369604 CLEC17AQ6ZS10 378 aa17.71■□□□□ 0.43
PHTF1-204ENST00000369604 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.71■□□□□ 0.43
PHTF1-204ENST00000369604 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.43
PHTF1-204ENST00000369604 PTPRTO14522 1441 aa17.71■□□□□ 0.43
PHTF1-204ENST00000369604 ZHX1Q9UKY1 873 aaPredicted RBP17.71■□□□□ 0.42
PHTF1-204ENST00000369604 TRIM35Q9UPQ4 493 aa17.71■□□□□ 0.42
PHTF1-204ENST00000369604 ZNF518AQ6AHZ1 1483 aa17.7■□□□□ 0.42
PHTF1-204ENST00000369604 TMEM132EQ6IEE7 984 aa17.7■□□□□ 0.42
PHTF1-204ENST00000369604 SASS6Q6UVJ0 657 aa17.7■□□□□ 0.42
PHTF1-204ENST00000369604 KIF3BO15066 747 aa17.69■□□□□ 0.42
PHTF1-204ENST00000369604 PDLIM2Q96JY6 352 aa17.69■□□□□ 0.42
PHTF1-204ENST00000369604 AK9Q5TCS8 1911 aa17.69■□□□□ 0.42
PHTF1-204ENST00000369604 MPNDQ8N594 471 aa17.69■□□□□ 0.42
PHTF1-204ENST00000369604 CHAMP1Q96JM3 812 aa17.69■□□□□ 0.42
PHTF1-204ENST00000369604 ELL2O00472 640 aaPredicted RBP17.68■□□□□ 0.42
PHTF1-204ENST00000369604 SMAP1Q8IYB5 467 aaPredicted RBP17.67■□□□□ 0.42
PHTF1-204ENST00000369604 GPT2Q8TD30 523 aa17.67■□□□□ 0.42
PHTF1-204ENST00000369604 SHPRHQ149N8 1683 aa17.67■□□□□ 0.42
PHTF1-204ENST00000369604 ZGPATQ8N5A5 531 aaKnown RBP17.67■□□□□ 0.42
PHTF1-204ENST00000369604 CHMP4BQ9H444 224 aaKnown RBP17.67■□□□□ 0.42
PHTF1-204ENST00000369604 SPHKAPQ2M3C7 1700 aa17.67■□□□□ 0.42
PHTF1-204ENST00000369604 ABCC11Q96J66 1382 aa17.66■□□□□ 0.42
PHTF1-204ENST00000369604 SAFB2Q14151 953 aaKnown RBP eCLIP17.66■□□□□ 0.42
PHTF1-204ENST00000369604 ST18O60284 1047 aa17.66■□□□□ 0.42
PHTF1-204ENST00000369604 MCM5P33992 734 aa17.66■□□□□ 0.42
PHTF1-204ENST00000369604 LRSAM1Q6UWE0 723 aa17.66■□□□□ 0.42
PHTF1-204ENST00000369604 GGNBP2Q9H3C7 697 aa17.66■□□□□ 0.42
PHTF1-204ENST00000369604 TRPM2O94759 1503 aa17.65■□□□□ 0.42
PHTF1-204ENST00000369604 ZBTB7BO15156 539 aaPredicted RBP17.65■□□□□ 0.42
PHTF1-204ENST00000369604 APBB1O00213 710 aa17.65■□□□□ 0.42
PHTF1-204ENST00000369604 CWC22Q9HCG8 908 aaKnown RBP17.65■□□□□ 0.42
PHTF1-204ENST00000369604 TMEM63CQ9P1W3 806 aa17.65■□□□□ 0.42
PHTF1-204ENST00000369604 PLEKHG5O94827 1062 aa17.64■□□□□ 0.42
PHTF1-204ENST00000369604 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.42
PHTF1-204ENST00000369604 CLTCL1P53675 1640 aa17.64■□□□□ 0.41
PHTF1-204ENST00000369604 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.41
PHTF1-204ENST00000369604 KIAA2012Q0VF49 1180 aa17.64■□□□□ 0.41
PHTF1-204ENST00000369604 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
PHTF1-204ENST00000369604 TPRNQ4KMQ1 711 aa17.63■□□□□ 0.41
PHTF1-204ENST00000369604 PLEKHF1Q96S99 279 aa17.63■□□□□ 0.41
PHTF1-204ENST00000369604 NOS1P29475 1434 aa17.63■□□□□ 0.41
PHTF1-204ENST00000369604 GSPT1P15170 499 aaKnown RBP17.62■□□□□ 0.41
PHTF1-204ENST00000369604 FOXD4L6Q3SYB3 417 aaPredicted RBP17.62■□□□□ 0.41
PHTF1-204ENST00000369604 FOXD4L3Q6VB84 417 aaPredicted RBP17.62■□□□□ 0.41
PHTF1-204ENST00000369604 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
PHTF1-204ENST00000369604 TRAPPC8Q9Y2L5 1435 aa17.62■□□□□ 0.41
PHTF1-204ENST00000369604 NSFL1CQ9UNZ2 370 aaKnown RBP17.62■□□□□ 0.41
PHTF1-204ENST00000369604 NUTM2DQ5VT03 806 aaPredicted RBP17.62■□□□□ 0.41
PHTF1-204ENST00000369604 CASC1Q6TDU7 716 aa17.62■□□□□ 0.41
PHTF1-204ENST00000369604 TSC1Q92574 1164 aa17.62■□□□□ 0.41
PHTF1-204ENST00000369604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.62■□□□□ 0.41
PHTF1-204ENST00000369604 CD109Q6YHK3 1445 aa17.62■□□□□ 0.41
PHTF1-204ENST00000369604 IL16Q14005 1332 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms