RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CARD11Q9BXL7 1154 aa29.29■■■□□ 2.28
SMNDC1-201ENST00000369592 ATRNO75882 1429 aa29.28■■■□□ 2.28
SMNDC1-201ENST00000369592 PPIP5K1Q6PFW1 1433 aa29.28■■■□□ 2.28
SMNDC1-201ENST00000369592 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.28■■■□□ 2.28
SMNDC1-201ENST00000369592 USP21Q9UK80 565 aa29.28■■■□□ 2.28
SMNDC1-201ENST00000369592 EVC2Q86UK5 1308 aa29.27■■■□□ 2.28
SMNDC1-201ENST00000369592 RBM6P78332 1123 aaKnown RBP29.25■■■□□ 2.27
SMNDC1-201ENST00000369592 LMOD2Q6P5Q4 547 aa29.24■■■□□ 2.27
SMNDC1-201ENST00000369592 TIMELESSQ9UNS1 1208 aa29.23■■■□□ 2.27
SMNDC1-201ENST00000369592 TRPC5Q9UL62 973 aaPredicted RBP29.22■■■□□ 2.27
SMNDC1-201ENST00000369592 NWD2Q9ULI1 1742 aa29.22■■■□□ 2.27
SMNDC1-201ENST00000369592 CABP1Q9NZU7 370 aa29.21■■■□□ 2.27
SMNDC1-201ENST00000369592 BRD4O60885 1362 aaPredicted RBP29.2■■■□□ 2.26
SMNDC1-201ENST00000369592 PLCH1Q4KWH8 1693 aa29.2■■■□□ 2.26
SMNDC1-201ENST00000369592 SSH2Q76I76 1423 aa29.2■■■□□ 2.26
SMNDC1-201ENST00000369592 PAK3O75914 559 aaPredicted RBP29.18■■■□□ 2.26
SMNDC1-201ENST00000369592 PHRF1Q9P1Y6 1649 aaKnown RBP29.17■■■□□ 2.26
SMNDC1-201ENST00000369592 FAM83GA6ND36 823 aa29.17■■■□□ 2.26
SMNDC1-201ENST00000369592 UNC5CLQ8IV45 518 aa29.17■■■□□ 2.26
SMNDC1-201ENST00000369592 USP6P35125 1406 aa29.17■■■□□ 2.26
SMNDC1-201ENST00000369592 AKAP12Q02952 1782 aa29.16■■■□□ 2.26
SMNDC1-201ENST00000369592 ATAD2Q6PL18 1390 aa29.15■■■□□ 2.26
SMNDC1-201ENST00000369592 TESK2Q96S53 571 aa29.15■■■□□ 2.26
SMNDC1-201ENST00000369592 HAP1P54257 671 aaPredicted RBP29.14■■■□□ 2.26
SMNDC1-201ENST00000369592 NRAPQ86VF7 1730 aa29.14■■■□□ 2.25
SMNDC1-201ENST00000369592 COL14A1Q05707 1796 aaKnown RBP29.13■■■□□ 2.25
SMNDC1-201ENST00000369592 CPSF1Q10570 1443 aaKnown RBP29.12■■■□□ 2.25
SMNDC1-201ENST00000369592 PLEKHG5O94827 1062 aa29.12■■■□□ 2.25
SMNDC1-201ENST00000369592 GLI3P10071 1580 aa29.12■■■□□ 2.25
SMNDC1-201ENST00000369592 USP19O94966 1318 aa29.12■■■□□ 2.25
SMNDC1-201ENST00000369592 GJD4Q96KN9 370 aaPredicted RBP29.11■■■□□ 2.25
SMNDC1-201ENST00000369592 PUS7Q96PZ0 661 aaKnown RBP29.11■■■□□ 2.25
SMNDC1-201ENST00000369592 ST20-MTHFSA0A0A6YYL1 179 aa29.09■■■□□ 2.25
SMNDC1-201ENST00000369592 ABTB2Q8N961 1025 aa29.08■■■□□ 2.25
SMNDC1-201ENST00000369592 NRKQ7Z2Y5 1582 aa29.08■■■□□ 2.25
SMNDC1-201ENST00000369592 VPS72Q15906 364 aa29.07■■■□□ 2.24
SMNDC1-201ENST00000369592 NUTM2GQ5VZR2 741 aa29.07■■■□□ 2.24
SMNDC1-201ENST00000369592 ZNF692Q9BU19 519 aaPredicted RBP29.07■■■□□ 2.24
SMNDC1-201ENST00000369592 CD163L1Q9NR16 1453 aa29.07■■■□□ 2.24
SMNDC1-201ENST00000369592 ZRANB1Q9UGI0 708 aa29.07■■■□□ 2.24
SMNDC1-201ENST00000369592 MON2Q7Z3U7 1717 aa29.06■■■□□ 2.24
SMNDC1-201ENST00000369592 PIK3C2AO00443 1686 aa29.06■■■□□ 2.24
SMNDC1-201ENST00000369592 KIAA0232Q92628 1395 aa29.03■■■□□ 2.24
SMNDC1-201ENST00000369592 SLIT3O75094 1523 aa29.03■■■□□ 2.24
SMNDC1-201ENST00000369592 CPDO75976 1380 aa29.02■■■□□ 2.24
SMNDC1-201ENST00000369592 USP47Q96K76 1375 aa29.02■■■□□ 2.24
SMNDC1-201ENST00000369592 NLRP13Q86W25 1043 aa29.02■■■□□ 2.24
SMNDC1-201ENST00000369592 BTG4Q9NY30 223 aa29.02■■■□□ 2.24
SMNDC1-201ENST00000369592 TTC21BQ7Z4L5 1316 aa29.01■■■□□ 2.23
SMNDC1-201ENST00000369592 ONECUT3O60422 494 aaPredicted RBP29.01■■■□□ 2.23
SMNDC1-201ENST00000369592 PRDM11Q9NQV5 511 aa29■■■□□ 2.23
SMNDC1-201ENST00000369592 LMO7Q8WWI1 1683 aa28.99■■■□□ 2.23
SMNDC1-201ENST00000369592 SLC24A1O60721 1099 aa28.99■■■□□ 2.23
SMNDC1-201ENST00000369592 CCER1Q8TC90 406 aaPredicted RBP28.99■■■□□ 2.23
SMNDC1-201ENST00000369592 GCP02774 474 aa28.98■■■□□ 2.23
SMNDC1-201ENST00000369592 TTC21AQ8NDW8 1320 aa28.97■■■□□ 2.23
SMNDC1-201ENST00000369592 ZC3H6P61129 1189 aaKnown RBP28.97■■■□□ 2.23
SMNDC1-201ENST00000369592 SLC12A5Q9H2X9 1139 aa28.97■■■□□ 2.23
SMNDC1-201ENST00000369592 KTN1Q86UP2 1357 aaKnown RBP28.97■■■□□ 2.23
SMNDC1-201ENST00000369592 USP54Q70EL1 1684 aa28.96■■■□□ 2.23
SMNDC1-201ENST00000369592 BRWD3Q6RI45 1802 aa28.95■■■□□ 2.23
SMNDC1-201ENST00000369592 NLRP6P59044 892 aa28.95■■■□□ 2.22
SMNDC1-201ENST00000369592 CHRNA2Q15822 529 aa28.95■■■□□ 2.22
SMNDC1-201ENST00000369592 CAMTA1Q9Y6Y1 1673 aa28.94■■■□□ 2.22
SMNDC1-201ENST00000369592 SPATA31A5Q5VU36 1347 aa28.93■■■□□ 2.22
SMNDC1-201ENST00000369592 SPATA31A7Q8IWB4 1347 aa28.93■■■□□ 2.22
SMNDC1-201ENST00000369592 NINLQ9Y2I6 1382 aa28.92■■■□□ 2.22
SMNDC1-201ENST00000369592 COL18A1P39060 1754 aa28.92■■■□□ 2.22
SMNDC1-201ENST00000369592 USP31Q70CQ4 1352 aa28.91■■■□□ 2.22
SMNDC1-201ENST00000369592 EP400Q96L91 3159 aa28.91■■■□□ 2.22
SMNDC1-201ENST00000369592 A0A1W2PP64 1363 aa28.9■■■□□ 2.22
SMNDC1-201ENST00000369592 TMC1Q8TDI8 760 aa28.89■■■□□ 2.22
SMNDC1-201ENST00000369592 EDC4Q6P2E9 1401 aaKnown RBP28.88■■■□□ 2.21
SMNDC1-201ENST00000369592 SEPT12Q8IYM1 358 aa28.88■■■□□ 2.21
SMNDC1-201ENST00000369592 NFAT5O94916 1531 aa28.87■■■□□ 2.21
SMNDC1-201ENST00000369592 AATKQ6ZMQ8 1374 aa28.87■■■□□ 2.21
SMNDC1-201ENST00000369592 TMF1P82094 1093 aa28.86■■■□□ 2.21
SMNDC1-201ENST00000369592 HDGFL2Q7Z4V5 671 aaPredicted RBP28.86■■■□□ 2.21
SMNDC1-201ENST00000369592 TERF2IPQ9NYB0 399 aa28.86■■■□□ 2.21
SMNDC1-201ENST00000369592 THSD7AQ9UPZ6 1657 aa28.86■■■□□ 2.21
SMNDC1-201ENST00000369592 CCDC125Q86Z20 511 aa28.85■■■□□ 2.21
SMNDC1-201ENST00000369592 CCDC9Q9Y3X0 531 aaKnown RBP28.85■■■□□ 2.21
SMNDC1-201ENST00000369592 SPATA31A1Q5TZJ5 1347 aa28.85■■■□□ 2.21
SMNDC1-201ENST00000369592 ARHGEF25Q86VW2 580 aa28.83■■■□□ 2.21
SMNDC1-201ENST00000369592 COL5A2P05997 1499 aaPredicted RBP28.83■■■□□ 2.21
SMNDC1-201ENST00000369592 NME9Q86XW9 330 aa28.82■■■□□ 2.2
SMNDC1-201ENST00000369592 KCNH5Q8NCM2 988 aa28.82■■■□□ 2.2
SMNDC1-201ENST00000369592 FAM98CQ17RN3 349 aaKnown RBP28.81■■■□□ 2.2
SMNDC1-201ENST00000369592 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.81■■■□□ 2.2
SMNDC1-201ENST00000369592 ANKRD36BQ8N2N9 1353 aa28.8■■■□□ 2.2
SMNDC1-201ENST00000369592 STRN4Q9NRL3 753 aa28.79■■■□□ 2.2
SMNDC1-201ENST00000369592 OVOS2A0A0J9YW53 1432 aa28.78■■■□□ 2.2
SMNDC1-201ENST00000369592 OVOS2Q6IE36 1432 aa28.78■■■□□ 2.2
SMNDC1-201ENST00000369592 LARP1Q6PKG0 1096 aaKnown RBP28.78■■■□□ 2.2
SMNDC1-201ENST00000369592 MYOM1P52179 1685 aa28.77■■■□□ 2.2
SMNDC1-201ENST00000369592 AXIN2Q9Y2T1 843 aa28.77■■■□□ 2.2
SMNDC1-201ENST00000369592 ABCC6O95255 1503 aa28.77■■■□□ 2.2
SMNDC1-201ENST00000369592 RGPD5Q99666 1765 aa28.77■■■□□ 2.2
SMNDC1-201ENST00000369592 CDCA8Q53HL2 280 aa28.76■■■□□ 2.19
SMNDC1-201ENST00000369592 EVA1CP58658 441 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms