RNA–Protein interactions for RNA: ENST00000369558.5

HIPK1-205, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK1, Length 8,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-205ENST00000369558 NINLQ9Y2I6 1382 aa16.59■□□□□ 0.25
HIPK1-205ENST00000369558 TCEAL9Q9UHQ7 104 aa16.59■□□□□ 0.25
HIPK1-205ENST00000369558 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
HIPK1-205ENST00000369558 HOOK1Q9UJC3 728 aaKnown RBP16.59■□□□□ 0.25
HIPK1-205ENST00000369558 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
HIPK1-205ENST00000369558 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
HIPK1-205ENST00000369558 STK3Q13188 491 aa16.58■□□□□ 0.25
HIPK1-205ENST00000369558 ANKRD20A12PQ8NF67 263 aa16.58■□□□□ 0.24
HIPK1-205ENST00000369558 RRS1Q15050 365 aaKnown RBP16.58■□□□□ 0.24
HIPK1-205ENST00000369558 TRIM5Q9C035 493 aa16.58■□□□□ 0.24
HIPK1-205ENST00000369558 CDK19Q9BWU1 502 aa16.58■□□□□ 0.24
HIPK1-205ENST00000369558 NAP1L1P55209 391 aaKnown RBP16.57■□□□□ 0.24
HIPK1-205ENST00000369558 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
HIPK1-205ENST00000369558 EHBP1L1Q8N3D4 1523 aa16.57■□□□□ 0.24
HIPK1-205ENST00000369558 CCDC70Q6NSX1 233 aa16.57■□□□□ 0.24
HIPK1-205ENST00000369558 SAFBQ15424 915 aaKnown RBP eCLIP16.57■□□□□ 0.24
HIPK1-205ENST00000369558 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
HIPK1-205ENST00000369558 ATF3P18847 181 aa16.56■□□□□ 0.24
HIPK1-205ENST00000369558 ESCO1Q5FWF5 840 aa16.56■□□□□ 0.24
HIPK1-205ENST00000369558 GNAI2P04899 355 aa16.56■□□□□ 0.24
HIPK1-205ENST00000369558 GPS2Q13227 327 aa16.56■□□□□ 0.24
HIPK1-205ENST00000369558 CFAP65Q6ZU64 1925 aaKnown RBP16.56■□□□□ 0.24
HIPK1-205ENST00000369558 ERBINQ96RT1 1412 aa16.56■□□□□ 0.24
HIPK1-205ENST00000369558 RBM10P98175 930 aaKnown RBP16.56■□□□□ 0.24
HIPK1-205ENST00000369558 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
HIPK1-205ENST00000369558 AAMPQ13685 434 aa16.55■□□□□ 0.24
HIPK1-205ENST00000369558 RRP12Q5JTH9 1297 aaKnown RBP16.55■□□□□ 0.24
HIPK1-205ENST00000369558 ATF7IPQ6VMQ6 1270 aa16.55■□□□□ 0.24
HIPK1-205ENST00000369558 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
HIPK1-205ENST00000369558 HECW1Q76N89 1606 aa16.54■□□□□ 0.24
HIPK1-205ENST00000369558 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
HIPK1-205ENST00000369558 C11orf95C9JLR9 678 aaPredicted RBP16.54■□□□□ 0.24
HIPK1-205ENST00000369558 MYL6BP14649 208 aa16.54■□□□□ 0.24
HIPK1-205ENST00000369558 GNAI3P08754 354 aa16.54■□□□□ 0.24
HIPK1-205ENST00000369558 PSMA5P28066 241 aa16.54■□□□□ 0.24
HIPK1-205ENST00000369558 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
HIPK1-205ENST00000369558 HDGFL1Q5TGJ6 251 aa16.54■□□□□ 0.24
HIPK1-205ENST00000369558 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
HIPK1-205ENST00000369558 MIS18AQ9NYP9 233 aa16.53■□□□□ 0.24
HIPK1-205ENST00000369558 MVPQ14764 893 aaKnown RBP16.53■□□□□ 0.24
HIPK1-205ENST00000369558 CCDC39Q9UFE4 941 aa16.53■□□□□ 0.24
HIPK1-205ENST00000369558 SMC2O95347 1197 aa16.53■□□□□ 0.24
HIPK1-205ENST00000369558 MNS1Q8NEH6 495 aa16.53■□□□□ 0.24
HIPK1-205ENST00000369558 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
HIPK1-205ENST00000369558 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.24
HIPK1-205ENST00000369558 RABEP1Q15276 862 aa16.52■□□□□ 0.24
HIPK1-205ENST00000369558 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
HIPK1-205ENST00000369558 KINO60870 393 aaKnown RBP16.52■□□□□ 0.23
HIPK1-205ENST00000369558 TSPY26PQ9H489 355 aa16.52■□□□□ 0.23
HIPK1-205ENST00000369558 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
HIPK1-205ENST00000369558 SCAPERQ9BY12 1400 aa16.52■□□□□ 0.23
HIPK1-205ENST00000369558 CHD1LQ86WJ1 897 aa16.52■□□□□ 0.23
HIPK1-205ENST00000369558 NAT10Q9H0A0 1025 aaKnown RBP16.52■□□□□ 0.23
HIPK1-205ENST00000369558 OLFM4Q6UX06 510 aa16.51■□□□□ 0.23
HIPK1-205ENST00000369558 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
HIPK1-205ENST00000369558 GCC1Q96CN9 775 aa16.51■□□□□ 0.23
HIPK1-205ENST00000369558 STRN4Q9NRL3 753 aa16.51■□□□□ 0.23
HIPK1-205ENST00000369558 RBM33Q96EV2 1170 aaKnown RBP16.51■□□□□ 0.23
HIPK1-205ENST00000369558 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
HIPK1-205ENST00000369558 STAC3Q96MF2 364 aa16.5■□□□□ 0.23
HIPK1-205ENST00000369558 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
HIPK1-205ENST00000369558 LRRCC1Q9C099 1032 aa16.5■□□□□ 0.23
HIPK1-205ENST00000369558 DAPK1P53355 1430 aa16.5■□□□□ 0.23
HIPK1-205ENST00000369558 TEX35Q5T0J7 233 aa16.49■□□□□ 0.23
HIPK1-205ENST00000369558 IL1RAPL2Q9NP60 686 aa16.49■□□□□ 0.23
HIPK1-205ENST00000369558 EFCAB5A4FU69 1503 aa16.49■□□□□ 0.23
HIPK1-205ENST00000369558 K7ELQ4 463 aaPredicted RBP16.49■□□□□ 0.23
HIPK1-205ENST00000369558 TMEM57Q8N5G2 664 aa16.49■□□□□ 0.23
HIPK1-205ENST00000369558 CWC27Q6UX04 472 aaKnown RBP16.48■□□□□ 0.23
HIPK1-205ENST00000369558 CTDP1Q9Y5B0 961 aaPredicted RBP16.48■□□□□ 0.23
HIPK1-205ENST00000369558 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
HIPK1-205ENST00000369558 SETQ01105 290 aaPredicted RBP16.48■□□□□ 0.23
HIPK1-205ENST00000369558 PTPN23Q9H3S7 1636 aa16.47■□□□□ 0.23
HIPK1-205ENST00000369558 RAPGEF3O95398 923 aa16.47■□□□□ 0.23
HIPK1-205ENST00000369558 MBD3O95983 291 aa16.47■□□□□ 0.23
HIPK1-205ENST00000369558 DCTN1Q14203 1278 aa16.47■□□□□ 0.23
HIPK1-205ENST00000369558 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
HIPK1-205ENST00000369558 SKIDA1Q1XH10 827 aa16.46■□□□□ 0.23
HIPK1-205ENST00000369558 CCDC43Q96MW1 224 aaKnown RBP16.46■□□□□ 0.23
HIPK1-205ENST00000369558 SLC26A8Q96RN1 970 aa16.46■□□□□ 0.23
HIPK1-205ENST00000369558 NSD3Q9BZ95 1437 aa16.46■□□□□ 0.23
HIPK1-205ENST00000369558 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
HIPK1-205ENST00000369558 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
HIPK1-205ENST00000369558 SRGAP3O43295 1099 aa16.46■□□□□ 0.22
HIPK1-205ENST00000369558 EPS15P42566 896 aa16.46■□□□□ 0.22
HIPK1-205ENST00000369558 WDR63Q8IWG1 891 aa16.46■□□□□ 0.22
HIPK1-205ENST00000369558 GRPEL1Q9HAV7 217 aa16.46■□□□□ 0.22
HIPK1-205ENST00000369558 MEX3CQ5U5Q3 659 aaKnown RBP16.45■□□□□ 0.22
HIPK1-205ENST00000369558 EXOC6BQ9Y2D4 811 aa16.45■□□□□ 0.22
HIPK1-205ENST00000369558 PDCP20941 246 aa16.45■□□□□ 0.22
HIPK1-205ENST00000369558 DDX54Q8TDD1 881 aaKnown RBP16.45■□□□□ 0.22
HIPK1-205ENST00000369558 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
HIPK1-205ENST00000369558 GPRASP1Q5JY77 1395 aa16.44■□□□□ 0.22
HIPK1-205ENST00000369558 FAM177A1Q8N128 213 aaPredicted RBP16.44■□□□□ 0.22
HIPK1-205ENST00000369558 KLHL34Q8N239 644 aa16.44■□□□□ 0.22
HIPK1-205ENST00000369558 RUFY1Q96T51 708 aa16.44■□□□□ 0.22
HIPK1-205ENST00000369558 CNNM1Q9NRU3 951 aa16.44■□□□□ 0.22
HIPK1-205ENST00000369558 CYP46A1Q9Y6A2 500 aa16.44■□□□□ 0.22
HIPK1-205ENST00000369558 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
HIPK1-205ENST00000369558 ME1P48163 572 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms