RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 ZSWIM4Q9H7M6 989 aa9.3□□□□□ -0.92
UFL1-201ENST00000369278 MBD3O95983 291 aa9.3□□□□□ -0.92
UFL1-201ENST00000369278 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
UFL1-201ENST00000369278 TMEM57Q8N5G2 664 aa9.3□□□□□ -0.92
UFL1-201ENST00000369278 TIGD1Q96MW7 591 aa9.3□□□□□ -0.92
UFL1-201ENST00000369278 H3BQV1 296 aa9.29□□□□□ -0.92
UFL1-201ENST00000369278 REC8O95072 547 aa9.29□□□□□ -0.92
UFL1-201ENST00000369278 MTHFSP49914 203 aa9.29□□□□□ -0.92
UFL1-201ENST00000369278 IFFO2Q5TF58 517 aa9.29□□□□□ -0.92
UFL1-201ENST00000369278 PDILTQ8N807 584 aa9.29□□□□□ -0.92
UFL1-201ENST00000369278 THUMPD2Q9BTF0 503 aaKnown RBP9.29□□□□□ -0.92
UFL1-201ENST00000369278 H0YHG0 523 aa9.29□□□□□ -0.92
UFL1-201ENST00000369278 STK3Q13188 491 aa9.29□□□□□ -0.92
UFL1-201ENST00000369278 SMC2O95347 1197 aa9.28□□□□□ -0.92
UFL1-201ENST00000369278 KLHL40Q2TBA0 621 aa9.28□□□□□ -0.92
UFL1-201ENST00000369278 INTS3Q68E01 1043 aaKnown RBP9.28□□□□□ -0.92
UFL1-201ENST00000369278 CHD1LQ86WJ1 897 aa9.28□□□□□ -0.92
UFL1-201ENST00000369278 CHMP4CQ96CF2 233 aa9.28□□□□□ -0.92
UFL1-201ENST00000369278 CUX1P39880 1505 aa9.28□□□□□ -0.92
UFL1-201ENST00000369278 MVPQ14764 893 aaKnown RBP9.28□□□□□ -0.92
UFL1-201ENST00000369278 A0A0G2JS52 829 aa9.28□□□□□ -0.92
UFL1-201ENST00000369278 LETM1O95202 739 aaPredicted RBP9.28□□□□□ -0.92
UFL1-201ENST00000369278 FAM193AP78312 1265 aa9.27□□□□□ -0.92
UFL1-201ENST00000369278 PKP1Q13835 747 aa9.27□□□□□ -0.92
UFL1-201ENST00000369278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.27□□□□□ -0.93
UFL1-201ENST00000369278 PLCD4Q9BRC7 762 aa9.27□□□□□ -0.93
UFL1-201ENST00000369278 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
UFL1-201ENST00000369278 CENPHQ9H3R5 247 aa9.27□□□□□ -0.93
UFL1-201ENST00000369278 RABEP1Q15276 862 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 STAC3Q96MF2 364 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 HECW1Q76N89 1606 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 RIOK3O14730 519 aaKnown RBP9.26□□□□□ -0.93
UFL1-201ENST00000369278 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
UFL1-201ENST00000369278 PPARDQ03181 441 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 DMRT2Q9Y5R5 561 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 LMAN1P49257 510 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 RARSP54136 660 aaKnown RBP9.26□□□□□ -0.93
UFL1-201ENST00000369278 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
UFL1-201ENST00000369278 ARGLU1Q9NWB6 273 aaPredicted RBP9.26□□□□□ -0.93
UFL1-201ENST00000369278 CIZ1Q9ULV3 898 aaPredicted RBP9.26□□□□□ -0.93
UFL1-201ENST00000369278 LRRIQ1Q96JM4 1722 aa9.25□□□□□ -0.93
UFL1-201ENST00000369278 PRDM2Q13029 1718 aa9.25□□□□□ -0.93
UFL1-201ENST00000369278 CCDC186Q7Z3E2 898 aa9.25□□□□□ -0.93
UFL1-201ENST00000369278 RUNDC1Q96C34 613 aa9.25□□□□□ -0.93
UFL1-201ENST00000369278 TFIP11Q9UBB9 837 aaKnown RBP9.25□□□□□ -0.93
UFL1-201ENST00000369278 GTF2A1P52655 376 aaPredicted RBP9.25□□□□□ -0.93
UFL1-201ENST00000369278 FAM184AQ8NB25 1140 aa9.25□□□□□ -0.93
UFL1-201ENST00000369278 SDF4Q9BRK5 362 aa9.25□□□□□ -0.93
UFL1-201ENST00000369278 CALCOCO1Q9P1Z2 691 aa9.25□□□□□ -0.93
UFL1-201ENST00000369278 MEX3CQ5U5Q3 659 aaKnown RBP9.24□□□□□ -0.93
UFL1-201ENST00000369278 LEKR1Q6ZMV7 388 aa9.24□□□□□ -0.93
UFL1-201ENST00000369278 NOL10Q9BSC4 688 aaKnown RBP9.24□□□□□ -0.93
UFL1-201ENST00000369278 SSH1Q8WYL5 1049 aa9.24□□□□□ -0.93
UFL1-201ENST00000369278 RNF216Q9NWF9 866 aaPredicted RBP9.24□□□□□ -0.93
UFL1-201ENST00000369278 NOL7Q9UMY1 257 aaKnown RBP9.24□□□□□ -0.93
UFL1-201ENST00000369278 PTGS1P23219 599 aa9.24□□□□□ -0.93
UFL1-201ENST00000369278 HSP90B2PQ58FF3 399 aa9.24□□□□□ -0.93
UFL1-201ENST00000369278 LTV1Q96GA3 475 aaPredicted RBP9.24□□□□□ -0.93
UFL1-201ENST00000369278 GTPBP4Q9BZE4 634 aaKnown RBP9.24□□□□□ -0.93
UFL1-201ENST00000369278 ATP6V1DQ9Y5K8 247 aa9.24□□□□□ -0.93
UFL1-201ENST00000369278 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
UFL1-201ENST00000369278 CCDC34Q96HJ3 373 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 TSPYL1Q9H0U9 437 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 RABEP2Q9H5N1 569 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 PHACTR2O75167 634 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 URI1O94763 535 aaPredicted RBP9.23□□□□□ -0.93
UFL1-201ENST00000369278 SETQ01105 290 aaPredicted RBP9.23□□□□□ -0.93
UFL1-201ENST00000369278 PTPN14Q15678 1187 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 NOM1Q5C9Z4 860 aaKnown RBP9.23□□□□□ -0.93
UFL1-201ENST00000369278 AXDND1Q5T1B0 1012 aaPredicted RBP9.23□□□□□ -0.93
UFL1-201ENST00000369278 ATF7IPQ6VMQ6 1270 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 CCDC102AQ96A19 550 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 TNMDQ9H2S6 317 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 DEF6Q9H4E7 631 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 C16orf71Q8IYS4 520 aaPredicted RBP9.23□□□□□ -0.93
UFL1-201ENST00000369278 UBXN4Q92575 508 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 SLC12A5Q9H2X9 1139 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 RPRD2Q5VT52 1461 aaKnown RBP9.23□□□□□ -0.93
UFL1-201ENST00000369278 HMMRO75330 724 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 CCDC192P0DO97 292 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 ATP2B3Q16720 1220 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 CHMP7Q8WUX9 453 aaPredicted RBP9.23□□□□□ -0.93
UFL1-201ENST00000369278 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
UFL1-201ENST00000369278 BRPF1P55201 1214 aaPredicted RBP9.22□□□□□ -0.93
UFL1-201ENST00000369278 DMTNQ08495 405 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 NAA30Q147X3 362 aaPredicted RBP9.22□□□□□ -0.93
UFL1-201ENST00000369278 IGF1RP08069 1367 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 ANKRD30BQ9BXX2 1392 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 ZSCAN20P17040 1043 aaPredicted RBP9.22□□□□□ -0.93
UFL1-201ENST00000369278 TAF3Q5VWG9 929 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 ISM2Q6H9L7 571 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 CWC15Q9P013 229 aaKnown RBP9.22□□□□□ -0.93
UFL1-201ENST00000369278 EXOC6BQ9Y2D4 811 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 RAB3GAP1Q15042 981 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 HSP90AA4PQ58FG1 418 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 KRT222Q8N1A0 295 aa9.22□□□□□ -0.93
UFL1-201ENST00000369278 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms