RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 CCDC94Q9BW85 323 aaPredicted RBP20.05■□□□□ 0.8
CHD1L-203ENST00000369259 ZBTB40Q9NUA8 1239 aa20.04■□□□□ 0.8
CHD1L-203ENST00000369259 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
CHD1L-203ENST00000369259 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
CHD1L-203ENST00000369259 DMTNQ08495 405 aa20.03■□□□□ 0.8
CHD1L-203ENST00000369259 PRDM10Q9NQV6 1147 aa20.03■□□□□ 0.8
CHD1L-203ENST00000369259 LMBRD1Q9NUN5 540 aa20.03■□□□□ 0.8
CHD1L-203ENST00000369259 PRIM1P49642 420 aaKnown RBP20.03■□□□□ 0.8
CHD1L-203ENST00000369259 CCDC39Q9UFE4 941 aa20.03■□□□□ 0.8
CHD1L-203ENST00000369259 NUCB2P80303 420 aa20.02■□□□□ 0.8
CHD1L-203ENST00000369259 ZHX1Q9UKY1 873 aaPredicted RBP20.02■□□□□ 0.8
CHD1L-203ENST00000369259 KIF16BQ96L93 1317 aa20.02■□□□□ 0.8
CHD1L-203ENST00000369259 TNNT2P45379 298 aaPredicted RBP20■□□□□ 0.79
CHD1L-203ENST00000369259 TMEM57Q8N5G2 664 aa20■□□□□ 0.79
CHD1L-203ENST00000369259 SSH1Q8WYL5 1049 aa20■□□□□ 0.79
CHD1L-203ENST00000369259 SPHKAPQ2M3C7 1700 aa20■□□□□ 0.79
CHD1L-203ENST00000369259 TBC1D9Q6ZT07 1266 aa20■□□□□ 0.79
CHD1L-203ENST00000369259 SYCP2Q9BX26 1530 aa20■□□□□ 0.79
CHD1L-203ENST00000369259 EXOSC9Q06265 439 aaKnown RBP19.99■□□□□ 0.79
CHD1L-203ENST00000369259 TSR2Q969E8 191 aaKnown RBP19.99■□□□□ 0.79
CHD1L-203ENST00000369259 NOB1Q9ULX3 412 aaKnown RBP19.99■□□□□ 0.79
CHD1L-203ENST00000369259 CYP2E1P05181 493 aaPredicted RBP19.99■□□□□ 0.79
CHD1L-203ENST00000369259 PREX2Q70Z35 1606 aa19.99■□□□□ 0.79
CHD1L-203ENST00000369259 CDC42BPBQ9Y5S2 1711 aa19.99■□□□□ 0.79
CHD1L-203ENST00000369259 ZSCAN20P17040 1043 aaPredicted RBP19.98■□□□□ 0.79
CHD1L-203ENST00000369259 CFAP53Q96M91 514 aa19.98■□□□□ 0.79
CHD1L-203ENST00000369259 CFAP74Q9C0B2 1584 aa19.97■□□□□ 0.79
CHD1L-203ENST00000369259 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
CHD1L-203ENST00000369259 ZNF518AQ6AHZ1 1483 aa19.96■□□□□ 0.79
CHD1L-203ENST00000369259 LRSAM1Q6UWE0 723 aa19.96■□□□□ 0.79
CHD1L-203ENST00000369259 MTHFSP49914 203 aa19.95■□□□□ 0.78
CHD1L-203ENST00000369259 NSD3Q9BZ95 1437 aa19.95■□□□□ 0.78
CHD1L-203ENST00000369259 FGD1P98174 961 aa19.95■□□□□ 0.78
CHD1L-203ENST00000369259 MYRIPQ8NFW9 859 aa19.95■□□□□ 0.78
CHD1L-203ENST00000369259 RABEP1Q15276 862 aa19.94■□□□□ 0.78
CHD1L-203ENST00000369259 GPT2Q8TD30 523 aa19.94■□□□□ 0.78
CHD1L-203ENST00000369259 RBM27Q9P2N5 1060 aaKnown RBP19.94■□□□□ 0.78
CHD1L-203ENST00000369259 PRPF40AO75400 957 aaKnown RBP19.94■□□□□ 0.78
CHD1L-203ENST00000369259 ANKRD45Q5TZF3 282 aa19.94■□□□□ 0.78
CHD1L-203ENST00000369259 IPO8O15397 1037 aaKnown RBP19.93■□□□□ 0.78
CHD1L-203ENST00000369259 NOS1P29475 1434 aa19.92■□□□□ 0.78
CHD1L-203ENST00000369259 KIAA2012Q0VF49 1180 aa19.92■□□□□ 0.78
CHD1L-203ENST00000369259 GCC1Q96CN9 775 aa19.92■□□□□ 0.78
CHD1L-203ENST00000369259 CWC22Q9HCG8 908 aaKnown RBP19.92■□□□□ 0.78
CHD1L-203ENST00000369259 ADGRL1O94910 1474 aa19.92■□□□□ 0.78
CHD1L-203ENST00000369259 TRPM2O94759 1503 aa19.92■□□□□ 0.78
CHD1L-203ENST00000369259 KIAA1210Q9ULL0 1709 aa19.92■□□□□ 0.78
CHD1L-203ENST00000369259 MRC2Q9UBG0 1479 aa19.92■□□□□ 0.78
CHD1L-203ENST00000369259 U2AF1L5P0DN76 240 aaPredicted RBP19.92■□□□□ 0.78
CHD1L-203ENST00000369259 U2AF1Q01081 240 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■■□□□ 13.9
CHD1L-203ENST00000369259 CDC45O75419 566 aa19.91■□□□□ 0.78
CHD1L-203ENST00000369259 GTPBP4Q9BZE4 634 aaKnown RBP19.91■□□□□ 0.78
CHD1L-203ENST00000369259 PKP1Q13835 747 aa19.91■□□□□ 0.78
CHD1L-203ENST00000369259 SYCE3A1L190 88 aa19.9■□□□□ 0.78
CHD1L-203ENST00000369259 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
CHD1L-203ENST00000369259 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
CHD1L-203ENST00000369259 TMEM63CQ9P1W3 806 aa19.9■□□□□ 0.78
CHD1L-203ENST00000369259 ABCC11Q96J66 1382 aa19.9■□□□□ 0.78
CHD1L-203ENST00000369259 ADGRB2O60241 1585 aa19.9■□□□□ 0.78
CHD1L-203ENST00000369259 AK9Q5TCS8 1911 aa19.89■□□□□ 0.77
CHD1L-203ENST00000369259 PTPRTO14522 1441 aa19.89■□□□□ 0.77
CHD1L-203ENST00000369259 PRIMPOLQ96LW4 560 aa19.89■□□□□ 0.77
CHD1L-203ENST00000369259 PTMAP06454 111 aaKnown RBP19.88■□□□□ 0.77
CHD1L-203ENST00000369259 ARHGAP5Q13017 1502 aa19.88■□□□□ 0.77
CHD1L-203ENST00000369259 DNTTIP2Q5QJE6 756 aaKnown RBP19.87■□□□□ 0.77
CHD1L-203ENST00000369259 SBNO2Q9Y2G9 1366 aa19.87■□□□□ 0.77
CHD1L-203ENST00000369259 KIF20AO95235 890 aa19.87■□□□□ 0.77
CHD1L-203ENST00000369259 HMGN5P82970 282 aaKnown RBP19.87■□□□□ 0.77
CHD1L-203ENST00000369259 ZNF710Q8N1W2 664 aa19.87■□□□□ 0.77
CHD1L-203ENST00000369259 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHD1L-203ENST00000369259 GTF2F1P35269 517 aaKnown RBP eCLIP19.86■□□□□ 0.77
CHD1L-203ENST00000369259 PPIP5K1Q6PFW1 1433 aa19.86■□□□□ 0.77
CHD1L-203ENST00000369259 IL16Q14005 1332 aa19.86■□□□□ 0.77
CHD1L-203ENST00000369259 TRIM35Q9UPQ4 493 aa19.85■□□□□ 0.77
CHD1L-203ENST00000369259 CLTCL1P53675 1640 aa19.85■□□□□ 0.77
CHD1L-203ENST00000369259 CBX1P83916 185 aa19.85■□□□□ 0.77
CHD1L-203ENST00000369259 RNF214Q8ND24 703 aa19.85■□□□□ 0.77
CHD1L-203ENST00000369259 CFAP44Q96MT7 982 aa19.85■□□□□ 0.77
CHD1L-203ENST00000369259 SLC12A5Q9H2X9 1139 aa19.85■□□□□ 0.77
CHD1L-203ENST00000369259 ZDHHC9Q9Y397 364 aa19.85■□□□□ 0.77
CHD1L-203ENST00000369259 TMPOP42166 694 aaKnown RBP19.84■□□□□ 0.77
CHD1L-203ENST00000369259 MBD3O95983 291 aa19.84■□□□□ 0.77
CHD1L-203ENST00000369259 ALDH1L2Q3SY69 923 aa19.84■□□□□ 0.77
CHD1L-203ENST00000369259 NSFL1CQ9UNZ2 370 aaKnown RBP19.84■□□□□ 0.77
CHD1L-203ENST00000369259 REREQ9P2R6 1566 aa19.83■□□□□ 0.77
CHD1L-203ENST00000369259 LETM1O95202 739 aaPredicted RBP19.83■□□□□ 0.77
CHD1L-203ENST00000369259 JARID2Q92833 1246 aaPredicted RBP19.83■□□□□ 0.77
CHD1L-203ENST00000369259 CHMP4BQ9H444 224 aaKnown RBP19.83■□□□□ 0.77
CHD1L-203ENST00000369259 ZBTB7BO15156 539 aaPredicted RBP19.83■□□□□ 0.76
CHD1L-203ENST00000369259 PPP4R3BQ5MIZ7 849 aa19.83■□□□□ 0.76
CHD1L-203ENST00000369259 ZGPATQ8N5A5 531 aaKnown RBP19.83■□□□□ 0.76
CHD1L-203ENST00000369259 CD109Q6YHK3 1445 aa19.82■□□□□ 0.76
CHD1L-203ENST00000369259 TSC1Q92574 1164 aa19.82■□□□□ 0.76
CHD1L-203ENST00000369259 USP26Q9BXU7 913 aa19.82■□□□□ 0.76
CHD1L-203ENST00000369259 MED14O60244 1454 aa19.81■□□□□ 0.76
CHD1L-203ENST00000369259 PIBF1Q8WXW3 757 aa19.81■□□□□ 0.76
CHD1L-203ENST00000369259 PLEKHF1Q96S99 279 aa19.81■□□□□ 0.76
CHD1L-203ENST00000369259 TSPY26PQ9H489 355 aa19.81■□□□□ 0.76
CHD1L-203ENST00000369259 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
CHD1L-203ENST00000369259 ST18O60284 1047 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms