RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 CHD1LQ86WJ1 897 aa23.18■■□□□ 1.3
PRDM1-202ENST00000369091 RNF214Q8ND24 703 aa23.18■■□□□ 1.3
PRDM1-202ENST00000369091 FAM177BA6PVY3 158 aa23.18■■□□□ 1.3
PRDM1-202ENST00000369091 PRPF40AO75400 957 aaKnown RBP23.18■■□□□ 1.3
PRDM1-202ENST00000369091 CEP152O94986 1710 aa23.18■■□□□ 1.3
PRDM1-202ENST00000369091 ARHGEF5Q12774 1597 aa23.18■■□□□ 1.3
PRDM1-202ENST00000369091 SYCE3A1L190 88 aa23.17■■□□□ 1.3
PRDM1-202ENST00000369091 MCM5P33992 734 aa23.17■■□□□ 1.3
PRDM1-202ENST00000369091 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
PRDM1-202ENST00000369091 ARHGAP31Q2M1Z3 1444 aa23.17■■□□□ 1.3
PRDM1-202ENST00000369091 UNC13BO14795 1591 aa23.17■■□□□ 1.3
PRDM1-202ENST00000369091 KDM5AP29375 1690 aaKnown RBP23.17■■□□□ 1.3
PRDM1-202ENST00000369091 MPNDQ8N594 471 aa23.16■■□□□ 1.3
PRDM1-202ENST00000369091 NOB1Q9ULX3 412 aaKnown RBP23.16■■□□□ 1.3
PRDM1-202ENST00000369091 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
PRDM1-202ENST00000369091 EXOSC9Q06265 439 aaKnown RBP23.16■■□□□ 1.3
PRDM1-202ENST00000369091 BMP2KLQ5H9B9 411 aa23.16■■□□□ 1.3
PRDM1-202ENST00000369091 KIF16BQ96L93 1317 aa23.15■■□□□ 1.3
PRDM1-202ENST00000369091 NSFL1CQ9UNZ2 370 aaKnown RBP23.15■■□□□ 1.3
PRDM1-202ENST00000369091 DNTTIP2Q5QJE6 756 aaKnown RBP23.14■■□□□ 1.3
PRDM1-202ENST00000369091 ATF7IPQ6VMQ6 1270 aa23.14■■□□□ 1.3
PRDM1-202ENST00000369091 MYRIPQ8NFW9 859 aa23.14■■□□□ 1.3
PRDM1-202ENST00000369091 BBXQ8WY36 941 aaPredicted RBP23.14■■□□□ 1.3
PRDM1-202ENST00000369091 ZBTB40Q9NUA8 1239 aa23.14■■□□□ 1.3
PRDM1-202ENST00000369091 TMEM63CQ9P1W3 806 aa23.14■■□□□ 1.3
PRDM1-202ENST00000369091 PPP4R3BQ5MIZ7 849 aa23.14■■□□□ 1.29
PRDM1-202ENST00000369091 MORC1Q86VD1 984 aa23.14■■□□□ 1.29
PRDM1-202ENST00000369091 ATP2B3Q16720 1220 aa23.13■■□□□ 1.29
PRDM1-202ENST00000369091 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.13■■□□□ 1.29
PRDM1-202ENST00000369091 KANK1Q14678 1352 aa23.13■■□□□ 1.29
PRDM1-202ENST00000369091 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
PRDM1-202ENST00000369091 PTMAP06454 111 aaKnown RBP23.12■■□□□ 1.29
PRDM1-202ENST00000369091 ANKRD45Q5TZF3 282 aa23.12■■□□□ 1.29
PRDM1-202ENST00000369091 LRSAM1Q6UWE0 723 aa23.12■■□□□ 1.29
PRDM1-202ENST00000369091 CFAP74Q9C0B2 1584 aa23.12■■□□□ 1.29
PRDM1-202ENST00000369091 SAMD9LQ8IVG5 1584 aa23.11■■□□□ 1.29
PRDM1-202ENST00000369091 KIAA2012Q0VF49 1180 aa23.11■■□□□ 1.29
PRDM1-202ENST00000369091 ERVK-7P63135 1459 aa23.11■■□□□ 1.29
PRDM1-202ENST00000369091 IQGAP3Q86VI3 1631 aa23.11■■□□□ 1.29
PRDM1-202ENST00000369091 GTF2E1P29083 439 aaPredicted RBP23.11■■□□□ 1.29
PRDM1-202ENST00000369091 CCDC27Q2M243 656 aa23.11■■□□□ 1.29
PRDM1-202ENST00000369091 NUCB2P80303 420 aa23.1■■□□□ 1.29
PRDM1-202ENST00000369091 PDE4CQ08493 712 aa23.1■■□□□ 1.29
PRDM1-202ENST00000369091 FOXD4L5Q5VV16 416 aaPredicted RBP23.09■■□□□ 1.29
PRDM1-202ENST00000369091 ZGPATQ8N5A5 531 aaKnown RBP23.09■■□□□ 1.29
PRDM1-202ENST00000369091 FOXD4L4Q8WXT5 416 aaPredicted RBP23.09■■□□□ 1.29
PRDM1-202ENST00000369091 ZNF830Q96NB3 372 aaPredicted RBP23.09■■□□□ 1.29
PRDM1-202ENST00000369091 C17orf53Q8N3J3 647 aaPredicted RBP23.08■■□□□ 1.28
PRDM1-202ENST00000369091 MTHFSP49914 203 aa23.07■■□□□ 1.28
PRDM1-202ENST00000369091 C1orf115Q9H7X2 142 aa23.07■■□□□ 1.28
PRDM1-202ENST00000369091 ATP10AO60312 1499 aa23.07■■□□□ 1.28
PRDM1-202ENST00000369091 NSD3Q9BZ95 1437 aa23.06■■□□□ 1.28
PRDM1-202ENST00000369091 SPDYE4A6NLX3 237 aa23.06■■□□□ 1.28
PRDM1-202ENST00000369091 GTPBP4Q9BZE4 634 aaKnown RBP23.06■■□□□ 1.28
PRDM1-202ENST00000369091 ZDHHC9Q9Y397 364 aa23.06■■□□□ 1.28
PRDM1-202ENST00000369091 IGSF3O75054 1194 aa23.05■■□□□ 1.28
PRDM1-202ENST00000369091 STAC3Q96MF2 364 aa23.05■■□□□ 1.28
PRDM1-202ENST00000369091 ATP10BO94823 1461 aa23.05■■□□□ 1.28
PRDM1-202ENST00000369091 U2AF1L5P0DN76 240 aaPredicted RBP23.05■■□□□ 1.28
PRDM1-202ENST00000369091 U2AF1Q01081 240 aaKnown RBP eCLIP23.05■■□□□ 1.28
PRDM1-202ENST00000369091 TTC37Q6PGP7 1564 aa23.04■■□□□ 1.28
PRDM1-202ENST00000369091 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
PRDM1-202ENST00000369091 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
PRDM1-202ENST00000369091 ABCA8O94911 1581 aa23.03■■□□□ 1.28
PRDM1-202ENST00000369091 KIF20AO95235 890 aa23.02■■□□□ 1.28
PRDM1-202ENST00000369091 RABEP1Q15276 862 aa23.02■■□□□ 1.28
PRDM1-202ENST00000369091 CDC45O75419 566 aa23.01■■□□□ 1.27
PRDM1-202ENST00000369091 CFAP70Q5T0N1 1121 aa23.01■■□□□ 1.27
PRDM1-202ENST00000369091 ZNF518AQ6AHZ1 1483 aa23■■□□□ 1.27
PRDM1-202ENST00000369091 PPIP5K1Q6PFW1 1433 aa23■■□□□ 1.27
PRDM1-202ENST00000369091 LETM1O95202 739 aaPredicted RBP23■■□□□ 1.27
PRDM1-202ENST00000369091 MAST1Q9Y2H9 1570 aa22.99■■□□□ 1.27
PRDM1-202ENST00000369091 NOS1P29475 1434 aa22.99■■□□□ 1.27
PRDM1-202ENST00000369091 CT47B1P0C2W7 299 aaPredicted RBP22.99■■□□□ 1.27
PRDM1-202ENST00000369091 DUOX2Q9NRD8 1548 aa22.99■■□□□ 1.27
PRDM1-202ENST00000369091 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
PRDM1-202ENST00000369091 GSPT1P15170 499 aaKnown RBP22.99■■□□□ 1.27
PRDM1-202ENST00000369091 PRIMPOLQ96LW4 560 aa22.99■■□□□ 1.27
PRDM1-202ENST00000369091 BCL2L12Q9HB09 334 aa22.99■■□□□ 1.27
PRDM1-202ENST00000369091 NOLC1Q14978 699 aaKnown RBP eCLIP22.98■■□□□ 1.27
PRDM1-202ENST00000369091 CDC42BPBQ9Y5S2 1711 aa22.98■■□□□ 1.27
PRDM1-202ENST00000369091 GTF2F1P35269 517 aaKnown RBP eCLIP22.97■■□□□ 1.27
PRDM1-202ENST00000369091 TTC12Q9H892 705 aaPredicted RBP22.97■■□□□ 1.27
PRDM1-202ENST00000369091 SLC12A5Q9H2X9 1139 aa22.97■■□□□ 1.27
PRDM1-202ENST00000369091 HMGN5P82970 282 aaKnown RBP22.96■■□□□ 1.27
PRDM1-202ENST00000369091 PIBF1Q8WXW3 757 aa22.96■■□□□ 1.27
PRDM1-202ENST00000369091 CFAP53Q96M91 514 aa22.96■■□□□ 1.27
PRDM1-202ENST00000369091 TSPY26PQ9H489 355 aa22.96■■□□□ 1.27
PRDM1-202ENST00000369091 KIF3AQ9Y496 699 aa22.96■■□□□ 1.27
PRDM1-202ENST00000369091 TRIM35Q9UPQ4 493 aa22.95■■□□□ 1.26
PRDM1-202ENST00000369091 CD109Q6YHK3 1445 aa22.94■■□□□ 1.26
PRDM1-202ENST00000369091 U2AF2P26368 475 aaKnown RBP eCLIP22.94■■□□□ 1.26
PRDM1-202ENST00000369091 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
PRDM1-202ENST00000369091 CWC22Q9HCG8 908 aaKnown RBP22.94■■□□□ 1.26
PRDM1-202ENST00000369091 TMEM51Q9NW97 253 aa22.94■■□□□ 1.26
PRDM1-202ENST00000369091 PDCL2Q8N4E4 241 aa22.93■■□□□ 1.26
PRDM1-202ENST00000369091 GCC1Q96CN9 775 aa22.93■■□□□ 1.26
PRDM1-202ENST00000369091 BCL11BQ9C0K0 894 aaPredicted RBP22.93■■□□□ 1.26
PRDM1-202ENST00000369091 SIRT2Q8IXJ6 389 aa22.93■■□□□ 1.26
PRDM1-202ENST00000369091 IPO8O15397 1037 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms