RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 CHGAP10645 457 aaKnown RBP6.75□□□□□ -1.33
CTSS-201ENST00000368985 LRRC37A3O60309 1634 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 NINLQ9Y2I6 1382 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 RGL3Q3MIN7 710 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 NHSQ6T4R5 1651 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 ADGRF5Q8IZF2 1346 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 PSME1Q06323 249 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 KDM2AQ9Y2K7 1162 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 USP19O94966 1318 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 POTEAQ6S8J7 498 aa6.74□□□□□ -1.33
CTSS-201ENST00000368985 CASZ1Q86V15 1759 aa6.73□□□□□ -1.33
CTSS-201ENST00000368985 BLMP54132 1417 aaPredicted RBP6.73□□□□□ -1.33
CTSS-201ENST00000368985 NGLY1Q96IV0 654 aa6.73□□□□□ -1.33
CTSS-201ENST00000368985 TRPC5Q9UL62 973 aaPredicted RBP6.73□□□□□ -1.33
CTSS-201ENST00000368985 NFAT5O94916 1531 aa6.72□□□□□ -1.33
CTSS-201ENST00000368985 KIF20BQ96Q89 1820 aa6.72□□□□□ -1.33
CTSS-201ENST00000368985 ZBTB22O15209 634 aa6.72□□□□□ -1.33
CTSS-201ENST00000368985 AATKQ6ZMQ8 1374 aa6.72□□□□□ -1.33
CTSS-201ENST00000368985 PLEKHG3A1L390 1219 aa6.71□□□□□ -1.33
CTSS-201ENST00000368985 VPS72Q15906 364 aa6.71□□□□□ -1.33
CTSS-201ENST00000368985 PAPPAQ13219 1627 aa6.71□□□□□ -1.33
CTSS-201ENST00000368985 RXRBP28702 533 aa6.71□□□□□ -1.34
CTSS-201ENST00000368985 AFF2P51816 1311 aa6.71□□□□□ -1.34
CTSS-201ENST00000368985 USP31Q70CQ4 1352 aa6.71□□□□□ -1.34
CTSS-201ENST00000368985 SCAF1Q9H7N4 1312 aaKnown RBP6.7□□□□□ -1.34
CTSS-201ENST00000368985 LTN1O94822 1766 aa6.7□□□□□ -1.34
CTSS-201ENST00000368985 PLEKHH1Q9ULM0 1364 aa6.7□□□□□ -1.34
CTSS-201ENST00000368985 NCBP3Q53F19 620 aaKnown RBP6.7□□□□□ -1.34
CTSS-201ENST00000368985 CPSF1Q10570 1443 aaKnown RBP6.7□□□□□ -1.34
CTSS-201ENST00000368985 UPF1Q92900 1129 aaKnown RBP eCLIP6.69□□□□□ -1.34
CTSS-201ENST00000368985 SHANK3Q9BYB0 1731 aa6.69□□□□□ -1.34
CTSS-201ENST00000368985 MYOM1P52179 1685 aa6.68□□□□□ -1.34
CTSS-201ENST00000368985 LY75O60449 1722 aa6.68□□□□□ -1.34
CTSS-201ENST00000368985 PKD1L3Q7Z443 1732 aa6.68□□□□□ -1.34
CTSS-201ENST00000368985 THRAP3Q9Y2W1 955 aaKnown RBP6.68□□□□□ -1.34
CTSS-201ENST00000368985 CLSPNQ9HAW4 1339 aa6.68□□□□□ -1.34
CTSS-201ENST00000368985 UNC5CLQ8IV45 518 aa6.68□□□□□ -1.34
CTSS-201ENST00000368985 PELP1Q8IZL8 1130 aaKnown RBP6.68□□□□□ -1.34
CTSS-201ENST00000368985 YTHDC1Q96MU7 727 aaKnown RBP6.68□□□□□ -1.34
CTSS-201ENST00000368985 TONSLQ96HA7 1378 aa6.68□□□□□ -1.34
CTSS-201ENST00000368985 WASLO00401 505 aaPredicted RBP6.67□□□□□ -1.34
CTSS-201ENST00000368985 PHF8Q9UPP1 1060 aa6.67□□□□□ -1.34
CTSS-201ENST00000368985 NUTM2DQ5VT03 806 aaPredicted RBP6.67□□□□□ -1.34
CTSS-201ENST00000368985 USP6P35125 1406 aa6.67□□□□□ -1.34
CTSS-201ENST00000368985 BARGINQ6ZT62 677 aa6.67□□□□□ -1.34
CTSS-201ENST00000368985 KIF24Q5T7B8 1368 aa6.67□□□□□ -1.34
CTSS-201ENST00000368985 PRKCSHP14314 528 aaPredicted RBP6.66□□□□□ -1.34
CTSS-201ENST00000368985 BCANQ96GW7 911 aa6.66□□□□□ -1.34
CTSS-201ENST00000368985 NCAPD2Q15021 1401 aa6.66□□□□□ -1.34
CTSS-201ENST00000368985 TTC21AQ8NDW8 1320 aa6.66□□□□□ -1.34
CTSS-201ENST00000368985 TIMELESSQ9UNS1 1208 aa6.66□□□□□ -1.34
CTSS-201ENST00000368985 MEX3CQ5U5Q3 659 aaKnown RBP6.65□□□□□ -1.34
CTSS-201ENST00000368985 POTEDQ86YR6 584 aa6.65□□□□□ -1.34
CTSS-201ENST00000368985 C14orf37Q86TY3 774 aa6.65□□□□□ -1.35
CTSS-201ENST00000368985 COL5A2P05997 1499 aaPredicted RBP6.65□□□□□ -1.35
CTSS-201ENST00000368985 RGPD5Q99666 1765 aa6.64□□□□□ -1.35
CTSS-201ENST00000368985 ERICH6Q7L0X2 663 aa6.64□□□□□ -1.35
CTSS-201ENST00000368985 GJD4Q96KN9 370 aaPredicted RBP6.64□□□□□ -1.35
CTSS-201ENST00000368985 SPATA31A5Q5VU36 1347 aa6.64□□□□□ -1.35
CTSS-201ENST00000368985 SPATA31A7Q8IWB4 1347 aa6.64□□□□□ -1.35
CTSS-201ENST00000368985 CD163L1Q9NR16 1453 aa6.64□□□□□ -1.35
CTSS-201ENST00000368985 PRR36Q9H6K5 1346 aa6.64□□□□□ -1.35
CTSS-201ENST00000368985 RTL1A6NKG5 1358 aa6.64□□□□□ -1.35
CTSS-201ENST00000368985 KRT28Q7Z3Y7 464 aa6.63□□□□□ -1.35
CTSS-201ENST00000368985 CDCA7Q9BWT1 371 aaPredicted RBP6.63□□□□□ -1.35
CTSS-201ENST00000368985 USP21Q9UK80 565 aa6.63□□□□□ -1.35
CTSS-201ENST00000368985 ORAI2Q96SN7 254 aa6.63□□□□□ -1.35
CTSS-201ENST00000368985 HMGB2P26583 209 aaKnown RBP6.63□□□□□ -1.35
CTSS-201ENST00000368985 DIEXFQ68CQ4 756 aaKnown RBP6.63□□□□□ -1.35
CTSS-201ENST00000368985 QTRT2Q9H974 415 aaKnown RBP6.63□□□□□ -1.35
CTSS-201ENST00000368985 DCAF11Q8TEB1 546 aa6.62□□□□□ -1.35
CTSS-201ENST00000368985 EDC4Q6P2E9 1401 aaKnown RBP6.62□□□□□ -1.35
CTSS-201ENST00000368985 OVOS2A0A0J9YW53 1432 aa6.62□□□□□ -1.35
CTSS-201ENST00000368985 CRB1P82279 1406 aa6.62□□□□□ -1.35
CTSS-201ENST00000368985 OVOS2Q6IE36 1432 aa6.62□□□□□ -1.35
CTSS-201ENST00000368985 PPIP5K1Q6PFW1 1433 aa6.62□□□□□ -1.35
CTSS-201ENST00000368985 ZNF316A6NFI3 1004 aaPredicted RBP6.61□□□□□ -1.35
CTSS-201ENST00000368985 L3MBTL2Q969R5 705 aa6.61□□□□□ -1.35
CTSS-201ENST00000368985 CCDC7Q96M83 1385 aa6.61□□□□□ -1.35
CTSS-201ENST00000368985 CFAP70Q5T0N1 1121 aa6.61□□□□□ -1.35
CTSS-201ENST00000368985 PRAM1Q96QH2 718 aa6.61□□□□□ -1.35
CTSS-201ENST00000368985 ZNF692Q9BU19 519 aaPredicted RBP6.61□□□□□ -1.35
CTSS-201ENST00000368985 TNS2Q63HR2 1409 aa6.61□□□□□ -1.35
CTSS-201ENST00000368985 ADAMTS7Q9UKP4 1686 aa6.61□□□□□ -1.35
CTSS-201ENST00000368985 DDX10Q13206 875 aaKnown RBP6.61□□□□□ -1.35
CTSS-201ENST00000368985 ESCO1Q5FWF5 840 aa6.61□□□□□ -1.35
CTSS-201ENST00000368985 CCDC61Q9Y6R9 512 aa6.61□□□□□ -1.35
CTSS-201ENST00000368985 SPATA31A1Q5TZJ5 1347 aa6.6□□□□□ -1.35
CTSS-201ENST00000368985 CENPJQ9HC77 1338 aaPredicted RBP6.6□□□□□ -1.35
CTSS-201ENST00000368985 NSD2O96028 1365 aa6.6□□□□□ -1.35
CTSS-201ENST00000368985 MAP3K5Q99683 1374 aa6.6□□□□□ -1.35
CTSS-201ENST00000368985 PPP4R3CPQ6ZMV5 832 aa6.6□□□□□ -1.35
CTSS-201ENST00000368985 SMG6Q86US8 1419 aaKnown RBP6.59□□□□□ -1.35
CTSS-201ENST00000368985 C5P01031 1676 aa6.59□□□□□ -1.35
CTSS-201ENST00000368985 BTAF1O14981 1849 aa6.59□□□□□ -1.35
CTSS-201ENST00000368985 TAF1LQ8IZX4 1826 aa6.59□□□□□ -1.35
CTSS-201ENST00000368985 TUBGCP6Q96RT7 1819 aa6.59□□□□□ -1.35
CTSS-201ENST00000368985 KIF13BQ9NQT8 1826 aa6.59□□□□□ -1.36
CTSS-201ENST00000368985 WAPLQ7Z5K2 1190 aa6.58□□□□□ -1.36
CTSS-201ENST00000368985 EVC2Q86UK5 1308 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms