RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
TUBE1-202ENST00000368662 SSH2Q76I76 1423 aa16.67■□□□□ 0.26
TUBE1-202ENST00000368662 NLRP13Q86W25 1043 aa16.67■□□□□ 0.26
TUBE1-202ENST00000368662 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
TUBE1-202ENST00000368662 PSME1Q06323 249 aa16.65■□□□□ 0.26
TUBE1-202ENST00000368662 GGNBP2Q9H3C7 697 aa16.65■□□□□ 0.26
TUBE1-202ENST00000368662 SLAIN2Q9P270 581 aa16.65■□□□□ 0.26
TUBE1-202ENST00000368662 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
TUBE1-202ENST00000368662 PPP2R1AP30153 589 aa16.63■□□□□ 0.25
TUBE1-202ENST00000368662 COG3Q96JB2 828 aa16.63■□□□□ 0.25
TUBE1-202ENST00000368662 FOXO3O43524 673 aa16.63■□□□□ 0.25
TUBE1-202ENST00000368662 MRS2Q9HD23 443 aa16.63■□□□□ 0.25
TUBE1-202ENST00000368662 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
TUBE1-202ENST00000368662 SCAF1Q9H7N4 1312 aaKnown RBP16.62■□□□□ 0.25
TUBE1-202ENST00000368662 NME9Q86XW9 330 aa16.62■□□□□ 0.25
TUBE1-202ENST00000368662 BRINP3Q76B58 766 aa16.6■□□□□ 0.25
TUBE1-202ENST00000368662 USP31Q70CQ4 1352 aa16.6■□□□□ 0.25
TUBE1-202ENST00000368662 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
TUBE1-202ENST00000368662 KRT28Q7Z3Y7 464 aa16.59■□□□□ 0.25
TUBE1-202ENST00000368662 OVOS2A0A0J9YW53 1432 aa16.59■□□□□ 0.25
TUBE1-202ENST00000368662 OVOS2Q6IE36 1432 aa16.59■□□□□ 0.25
TUBE1-202ENST00000368662 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.24
TUBE1-202ENST00000368662 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.24
TUBE1-202ENST00000368662 ABTB2Q8N961 1025 aa16.58■□□□□ 0.24
TUBE1-202ENST00000368662 AATKQ6ZMQ8 1374 aa16.57■□□□□ 0.24
TUBE1-202ENST00000368662 CCDC184Q52MB2 194 aa16.57■□□□□ 0.24
TUBE1-202ENST00000368662 PIK3C2AO00443 1686 aa16.57■□□□□ 0.24
TUBE1-202ENST00000368662 NLRP6P59044 892 aa16.56■□□□□ 0.24
TUBE1-202ENST00000368662 SBNO1A3KN83 1393 aa16.56■□□□□ 0.24
TUBE1-202ENST00000368662 USP54Q70EL1 1684 aa16.56■□□□□ 0.24
TUBE1-202ENST00000368662 TOM1O60784 492 aa16.55■□□□□ 0.24
TUBE1-202ENST00000368662 ZRANB1Q9UGI0 708 aa16.55■□□□□ 0.24
TUBE1-202ENST00000368662 TRPM3Q9HCF6 1732 aaPredicted RBP16.55■□□□□ 0.24
TUBE1-202ENST00000368662 PXDNQ92626 1479 aa16.54■□□□□ 0.24
TUBE1-202ENST00000368662 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
TUBE1-202ENST00000368662 CFAP53Q96M91 514 aa16.54■□□□□ 0.24
TUBE1-202ENST00000368662 MTHFSP49914 203 aa16.53■□□□□ 0.24
TUBE1-202ENST00000368662 PNISRQ8TF01 805 aaKnown RBP16.52■□□□□ 0.24
TUBE1-202ENST00000368662 SOS2Q07890 1332 aaPredicted RBP16.52■□□□□ 0.23
TUBE1-202ENST00000368662 TNS3Q68CZ2 1445 aa16.51■□□□□ 0.23
TUBE1-202ENST00000368662 SMG6Q86US8 1419 aaKnown RBP16.51■□□□□ 0.23
TUBE1-202ENST00000368662 ARHGEF10O15013 1369 aa16.51■□□□□ 0.23
TUBE1-202ENST00000368662 KCNH5Q8NCM2 988 aa16.51■□□□□ 0.23
TUBE1-202ENST00000368662 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
TUBE1-202ENST00000368662 ALS2Q96Q42 1657 aa16.5■□□□□ 0.23
TUBE1-202ENST00000368662 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
TUBE1-202ENST00000368662 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
TUBE1-202ENST00000368662 POLKQ9UBT6 870 aa16.5■□□□□ 0.23
TUBE1-202ENST00000368662 SPATA31A3Q5VYP0 1347 aa16.5■□□□□ 0.23
TUBE1-202ENST00000368662 LMOD2Q6P5Q4 547 aa16.49■□□□□ 0.23
TUBE1-202ENST00000368662 ROBO1Q9Y6N7 1651 aa16.49■□□□□ 0.23
TUBE1-202ENST00000368662 NUTM2GQ5VZR2 741 aa16.49■□□□□ 0.23
TUBE1-202ENST00000368662 CERKQ8TCT0 537 aa16.49■□□□□ 0.23
TUBE1-202ENST00000368662 INSRP06213 1382 aa16.49■□□□□ 0.23
TUBE1-202ENST00000368662 PNPLA6Q8IY17 1366 aa16.49■□□□□ 0.23
TUBE1-202ENST00000368662 MAP2P11137 1827 aaKnown RBP16.48■□□□□ 0.23
TUBE1-202ENST00000368662 USP19O94966 1318 aa16.48■□□□□ 0.23
TUBE1-202ENST00000368662 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.23
TUBE1-202ENST00000368662 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
TUBE1-202ENST00000368662 CDK12Q9NYV4 1490 aaPredicted RBP16.47■□□□□ 0.23
TUBE1-202ENST00000368662 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
TUBE1-202ENST00000368662 AHDC1Q5TGY3 1603 aaPredicted RBP16.47■□□□□ 0.23
TUBE1-202ENST00000368662 EMILIN1Q9Y6C2 1016 aa16.46■□□□□ 0.23
TUBE1-202ENST00000368662 SLIT3O75094 1523 aa16.46■□□□□ 0.23
TUBE1-202ENST00000368662 UBAP1LF5GYI3 381 aa16.46■□□□□ 0.23
TUBE1-202ENST00000368662 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
TUBE1-202ENST00000368662 PPM1GO15355 546 aaPredicted RBP16.45■□□□□ 0.22
TUBE1-202ENST00000368662 FBLN1P23142 703 aa16.45■□□□□ 0.22
TUBE1-202ENST00000368662 NUDCQ9Y266 331 aa16.45■□□□□ 0.22
TUBE1-202ENST00000368662 SOX12O15370 315 aa16.45■□□□□ 0.22
TUBE1-202ENST00000368662 GCP02774 474 aa16.44■□□□□ 0.22
TUBE1-202ENST00000368662 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
TUBE1-202ENST00000368662 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
TUBE1-202ENST00000368662 MED1Q15648 1581 aaPredicted RBP16.44■□□□□ 0.22
TUBE1-202ENST00000368662 COL3A1P02461 1466 aaPredicted RBP16.44■□□□□ 0.22
TUBE1-202ENST00000368662 LRRC59Q96AG4 307 aaKnown RBP16.43■□□□□ 0.22
TUBE1-202ENST00000368662 NFAT5O94916 1531 aa16.43■□□□□ 0.22
TUBE1-202ENST00000368662 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
TUBE1-202ENST00000368662 FLT4P35916 1363 aa16.43■□□□□ 0.22
TUBE1-202ENST00000368662 DIAPH1O60610 1272 aaKnown RBP16.43■□□□□ 0.22
TUBE1-202ENST00000368662 AMPHP49418 695 aa16.42■□□□□ 0.22
TUBE1-202ENST00000368662 PIP4K2BP78356 416 aa16.41■□□□□ 0.22
TUBE1-202ENST00000368662 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
TUBE1-202ENST00000368662 SHPRHQ149N8 1683 aa16.4■□□□□ 0.22
TUBE1-202ENST00000368662 PHRF1Q9P1Y6 1649 aaKnown RBP16.39■□□□□ 0.21
TUBE1-202ENST00000368662 ARHGEF25Q86VW2 580 aa16.39■□□□□ 0.21
TUBE1-202ENST00000368662 PEAK1Q9H792 1746 aa16.38■□□□□ 0.21
TUBE1-202ENST00000368662 BLMP54132 1417 aaPredicted RBP16.38■□□□□ 0.21
TUBE1-202ENST00000368662 HOXC9P31274 260 aa16.37■□□□□ 0.21
TUBE1-202ENST00000368662 IP6K1Q92551 441 aa16.37■□□□□ 0.21
TUBE1-202ENST00000368662 PHLPP1O60346 1717 aa16.37■□□□□ 0.21
TUBE1-202ENST00000368662 CRYBG1Q9Y4K1 1723 aa16.37■□□□□ 0.21
TUBE1-202ENST00000368662 LTN1O94822 1766 aa16.37■□□□□ 0.21
TUBE1-202ENST00000368662 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
TUBE1-202ENST00000368662 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
TUBE1-202ENST00000368662 IL13P35225 146 aa16.37■□□□□ 0.21
TUBE1-202ENST00000368662 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
TUBE1-202ENST00000368662 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■□□□□ 10.4
TUBE1-202ENST00000368662 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
TUBE1-202ENST00000368662 CPDO75976 1380 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms