RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 NBPF1Q3BBV0 1214 aa19.71■□□□□ 0.75
PMF1-202ENST00000368277 SEPT12Q8IYM1 358 aa19.71■□□□□ 0.75
PMF1-202ENST00000368277 NUDT16Q96DE0 195 aaKnown RBP19.7■□□□□ 0.74
PMF1-202ENST00000368277 BTG4Q9NY30 223 aa19.69■□□□□ 0.74
PMF1-202ENST00000368277 CDK19Q9BWU1 502 aa19.68■□□□□ 0.74
PMF1-202ENST00000368277 A0A0G2JS52 829 aa19.67■□□□□ 0.74
PMF1-202ENST00000368277 MYT1Q01538 1121 aa19.67■□□□□ 0.74
PMF1-202ENST00000368277 NUTM2GQ5VZR2 741 aa19.67■□□□□ 0.74
PMF1-202ENST00000368277 STAC3Q96MF2 364 aa19.67■□□□□ 0.74
PMF1-202ENST00000368277 DEFB132Q7Z7B7 95 aa19.66■□□□□ 0.74
PMF1-202ENST00000368277 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
PMF1-202ENST00000368277 NRKQ7Z2Y5 1582 aa19.66■□□□□ 0.74
PMF1-202ENST00000368277 TRPM1Q7Z4N2 1603 aa19.65■□□□□ 0.74
PMF1-202ENST00000368277 THSD7AQ9UPZ6 1657 aa19.65■□□□□ 0.74
PMF1-202ENST00000368277 FAM98CQ17RN3 349 aaKnown RBP19.65■□□□□ 0.74
PMF1-202ENST00000368277 SRCAPQ6ZRS2 3230 aa19.64■□□□□ 0.73
PMF1-202ENST00000368277 KIAA0232Q92628 1395 aa19.63■□□□□ 0.73
PMF1-202ENST00000368277 ACEP12821 1306 aa19.63■□□□□ 0.73
PMF1-202ENST00000368277 CHRNA2Q15822 529 aa19.63■□□□□ 0.73
PMF1-202ENST00000368277 RGPD1P0DJD0 1748 aa19.62■□□□□ 0.73
PMF1-202ENST00000368277 TNS1Q9HBL0 1735 aaKnown RBP19.62■□□□□ 0.73
PMF1-202ENST00000368277 FAM182BQ5T319 152 aa19.62■□□□□ 0.73
PMF1-202ENST00000368277 KRT27Q7Z3Y8 459 aa19.62■□□□□ 0.73
PMF1-202ENST00000368277 ONECUT3O60422 494 aaPredicted RBP19.61■□□□□ 0.73
PMF1-202ENST00000368277 PRDM11Q9NQV5 511 aa19.61■□□□□ 0.73
PMF1-202ENST00000368277 POLR3AO14802 1390 aaPredicted RBP19.6■□□□□ 0.73
PMF1-202ENST00000368277 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
PMF1-202ENST00000368277 CCDC125Q86Z20 511 aa19.6■□□□□ 0.73
PMF1-202ENST00000368277 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
PMF1-202ENST00000368277 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
PMF1-202ENST00000368277 PPIP5K1Q6PFW1 1433 aa19.59■□□□□ 0.73
PMF1-202ENST00000368277 CABP2Q9NPB3 220 aa19.59■□□□□ 0.73
PMF1-202ENST00000368277 LMO7Q8WWI1 1683 aa19.59■□□□□ 0.73
PMF1-202ENST00000368277 SPATA31A5Q5VU36 1347 aa19.58■□□□□ 0.73
PMF1-202ENST00000368277 SPATA31A7Q8IWB4 1347 aa19.58■□□□□ 0.73
PMF1-202ENST00000368277 CENPJQ9HC77 1338 aaPredicted RBP19.58■□□□□ 0.73
PMF1-202ENST00000368277 NBPF8Q3BBV2 869 aa19.58■□□□□ 0.72
PMF1-202ENST00000368277 SRPK2P78362 688 aaKnown RBP19.57■□□□□ 0.72
PMF1-202ENST00000368277 L3MBTL2Q969R5 705 aa19.57■□□□□ 0.72
PMF1-202ENST00000368277 STRN4Q9NRL3 753 aa19.57■□□□□ 0.72
PMF1-202ENST00000368277 CCDC61Q9Y6R9 512 aa19.57■□□□□ 0.72
PMF1-202ENST00000368277 AKAP12Q02952 1782 aa19.56■□□□□ 0.72
PMF1-202ENST00000368277 SF3B2Q13435 895 aaKnown RBP19.55■□□□□ 0.72
PMF1-202ENST00000368277 PIK3C2AO00443 1686 aa19.55■□□□□ 0.72
PMF1-202ENST00000368277 CAMTA1Q9Y6Y1 1673 aa19.55■□□□□ 0.72
PMF1-202ENST00000368277 RGPD5Q99666 1765 aa19.55■□□□□ 0.72
PMF1-202ENST00000368277 PLEKHG3A1L390 1219 aa19.54■□□□□ 0.72
PMF1-202ENST00000368277 NEUROD1Q13562 356 aa19.54■□□□□ 0.72
PMF1-202ENST00000368277 ABTB2Q8N961 1025 aa19.53■□□□□ 0.72
PMF1-202ENST00000368277 SPATA31A1Q5TZJ5 1347 aa19.52■□□□□ 0.72
PMF1-202ENST00000368277 USP35Q9P2H5 1018 aa19.52■□□□□ 0.72
PMF1-202ENST00000368277 SSH2Q76I76 1423 aa19.51■□□□□ 0.71
PMF1-202ENST00000368277 WNK3Q9BYP7 1800 aa19.51■□□□□ 0.71
PMF1-202ENST00000368277 USP19O94966 1318 aa19.5■□□□□ 0.71
PMF1-202ENST00000368277 ZBTB7CA1YPR0 619 aa19.49■□□□□ 0.71
PMF1-202ENST00000368277 COL18A1P39060 1754 aa19.48■□□□□ 0.71
PMF1-202ENST00000368277 PSDA5PKW4 1024 aaPredicted RBP19.48■□□□□ 0.71
PMF1-202ENST00000368277 CABP1Q9NZU7 370 aa19.48■□□□□ 0.71
PMF1-202ENST00000368277 USP6P35125 1406 aa19.48■□□□□ 0.71
PMF1-202ENST00000368277 EN1Q05925 392 aaPredicted RBP19.47■□□□□ 0.71
PMF1-202ENST00000368277 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
PMF1-202ENST00000368277 PARP4Q9UKK3 1724 aaKnown RBP19.47■□□□□ 0.71
PMF1-202ENST00000368277 SLIT3O75094 1523 aa19.46■□□□□ 0.71
PMF1-202ENST00000368277 ROCK2O75116 1388 aaKnown RBP19.46■□□□□ 0.71
PMF1-202ENST00000368277 BAG6P46379 1132 aa19.46■□□□□ 0.71
PMF1-202ENST00000368277 LRP5O75197 1615 aa19.46■□□□□ 0.71
PMF1-202ENST00000368277 MON2Q7Z3U7 1717 aa19.45■□□□□ 0.7
PMF1-202ENST00000368277 EVA1CP58658 441 aa19.45■□□□□ 0.7
PMF1-202ENST00000368277 COL5A2P05997 1499 aaPredicted RBP19.45■□□□□ 0.7
PMF1-202ENST00000368277 CPDO75976 1380 aa19.44■□□□□ 0.7
PMF1-202ENST00000368277 RREB1Q92766 1687 aa19.44■□□□□ 0.7
PMF1-202ENST00000368277 SBF2Q86WG5 1849 aa19.44■□□□□ 0.7
PMF1-202ENST00000368277 LRRC37A3O60309 1634 aa19.43■□□□□ 0.7
PMF1-202ENST00000368277 NUP188Q5SRE5 1749 aa19.43■□□□□ 0.7
PMF1-202ENST00000368277 GCP02774 474 aa19.43■□□□□ 0.7
PMF1-202ENST00000368277 NLRP13Q86W25 1043 aa19.43■□□□□ 0.7
PMF1-202ENST00000368277 TRIM37O94972 964 aa19.42■□□□□ 0.7
PMF1-202ENST00000368277 EVC2Q86UK5 1308 aa19.42■□□□□ 0.7
PMF1-202ENST00000368277 NLRP6P59044 892 aa19.41■□□□□ 0.7
PMF1-202ENST00000368277 EZH2Q15910 746 aaKnown RBP19.4■□□□□ 0.7
PMF1-202ENST00000368277 PEAK1Q9H792 1746 aa19.39■□□□□ 0.7
PMF1-202ENST00000368277 SOX12O15370 315 aa19.39■□□□□ 0.69
PMF1-202ENST00000368277 DISP2A7MBM2 1401 aa19.39■□□□□ 0.69
PMF1-202ENST00000368277 LTN1O94822 1766 aa19.39■□□□□ 0.69
PMF1-202ENST00000368277 BARGINQ6ZT62 677 aa19.38■□□□□ 0.69
PMF1-202ENST00000368277 TCP11L2Q8N4U5 519 aa19.38■□□□□ 0.69
PMF1-202ENST00000368277 BRD4O60885 1362 aaPredicted RBP19.37■□□□□ 0.69
PMF1-202ENST00000368277 CRB1P82279 1406 aa19.36■□□□□ 0.69
PMF1-202ENST00000368277 R3HDM1Q15032 1099 aaKnown RBP19.36■□□□□ 0.69
PMF1-202ENST00000368277 NFAT5O94916 1531 aa19.35■□□□□ 0.69
PMF1-202ENST00000368277 TTC21BQ7Z4L5 1316 aa19.35■□□□□ 0.69
PMF1-202ENST00000368277 PDE3BQ13370 1112 aa19.35■□□□□ 0.69
PMF1-202ENST00000368277 FAM196AQ6ZSG2 479 aa19.35■□□□□ 0.69
PMF1-202ENST00000368277 CPSF1Q10570 1443 aaKnown RBP19.34■□□□□ 0.69
PMF1-202ENST00000368277 APBA3O96018 575 aa19.34■□□□□ 0.69
PMF1-202ENST00000368277 AXIN2Q9Y2T1 843 aa19.34■□□□□ 0.69
PMF1-202ENST00000368277 USP54Q70EL1 1684 aa19.33■□□□□ 0.69
PMF1-202ENST00000368277 AATKQ6ZMQ8 1374 aa19.33■□□□□ 0.69
PMF1-202ENST00000368277 CAMKK2Q96RR4 588 aa19.33■□□□□ 0.68
PMF1-202ENST00000368277 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms