RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 LAMC1P11047 1609 aa13.7□□□□□ -0.22
NECTIN4-201ENST00000368012 RNF214Q8ND24 703 aa13.7□□□□□ -0.22
NECTIN4-201ENST00000368012 VGFO15240 615 aaPredicted RBP13.69□□□□□ -0.22
NECTIN4-201ENST00000368012 ESPNB1AK53 854 aa13.69□□□□□ -0.22
NECTIN4-201ENST00000368012 DNTTIP2Q5QJE6 756 aaKnown RBP13.69□□□□□ -0.22
NECTIN4-201ENST00000368012 ANTXR1Q9H6X2 564 aa13.69□□□□□ -0.22
NECTIN4-201ENST00000368012 ABCC2Q92887 1545 aa13.69□□□□□ -0.22
NECTIN4-201ENST00000368012 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
NECTIN4-201ENST00000368012 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
NECTIN4-201ENST00000368012 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
NECTIN4-201ENST00000368012 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
NECTIN4-201ENST00000368012 C16orf71Q8IYS4 520 aaPredicted RBP13.68□□□□□ -0.22
NECTIN4-201ENST00000368012 CLTCL1P53675 1640 aa13.68□□□□□ -0.22
NECTIN4-201ENST00000368012 ATAD2Q6PL18 1390 aa13.68□□□□□ -0.22
NECTIN4-201ENST00000368012 RRS1Q15050 365 aaKnown RBP13.68□□□□□ -0.22
NECTIN4-201ENST00000368012 PLXNC1O60486 1568 aa13.67□□□□□ -0.22
NECTIN4-201ENST00000368012 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
NECTIN4-201ENST00000368012 WAPLQ7Z5K2 1190 aa13.67□□□□□ -0.22
NECTIN4-201ENST00000368012 MIS18AQ9NYP9 233 aa13.67□□□□□ -0.22
NECTIN4-201ENST00000368012 KIF16BQ96L93 1317 aa13.66□□□□□ -0.22
NECTIN4-201ENST00000368012 PTPRTO14522 1441 aa13.66□□□□□ -0.22
NECTIN4-201ENST00000368012 NASPP49321 788 aaPredicted RBP13.66□□□□□ -0.22
NECTIN4-201ENST00000368012 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
NECTIN4-201ENST00000368012 NINLQ9Y2I6 1382 aa13.66□□□□□ -0.22
NECTIN4-201ENST00000368012 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
NECTIN4-201ENST00000368012 PRPF40AO75400 957 aaKnown RBP13.66□□□□□ -0.22
NECTIN4-201ENST00000368012 TRPM2O94759 1503 aa13.66□□□□□ -0.22
NECTIN4-201ENST00000368012 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 C14orf37Q86TY3 774 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 KRT24Q2M2I5 525 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 CASC1Q6TDU7 716 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 PHACTR3Q96KR7 559 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 FAM13BQ9NYF5 915 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
NECTIN4-201ENST00000368012 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 GAS2L3Q86XJ1 694 aa13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 IQGAP1P46940 1657 aa13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 CDK19Q9BWU1 502 aa13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 KDM5AP29375 1690 aaKnown RBP13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 ERBB4Q15303 1308 aa13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 K7ELQ4 463 aaPredicted RBP13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 FYB1O15117 783 aa13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 C14orf93Q9H972 538 aaKnown RBP13.64□□□□□ -0.23
NECTIN4-201ENST00000368012 DTNBO60941 627 aa13.63□□□□□ -0.23
NECTIN4-201ENST00000368012 CLASP1Q7Z460 1538 aa13.63□□□□□ -0.23
NECTIN4-201ENST00000368012 ABCC1P33527 1531 aa13.63□□□□□ -0.23
NECTIN4-201ENST00000368012 FANCAO15360 1455 aa13.63□□□□□ -0.23
NECTIN4-201ENST00000368012 R3HCC1Q9Y3T6 440 aaKnown RBP13.63□□□□□ -0.23
NECTIN4-201ENST00000368012 IDI1Q13907 227 aa13.62□□□□□ -0.23
NECTIN4-201ENST00000368012 ZBTB40Q9NUA8 1239 aa13.62□□□□□ -0.23
NECTIN4-201ENST00000368012 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
NECTIN4-201ENST00000368012 ESF1Q9H501 851 aaKnown RBP13.61□□□□□ -0.23
NECTIN4-201ENST00000368012 NUCB1Q02818 461 aa13.61□□□□□ -0.23
NECTIN4-201ENST00000368012 AAMPQ13685 434 aa13.61□□□□□ -0.23
NECTIN4-201ENST00000368012 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
NECTIN4-201ENST00000368012 CDC45O75419 566 aa13.61□□□□□ -0.23
NECTIN4-201ENST00000368012 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
NECTIN4-201ENST00000368012 ADGRL1O94910 1474 aa13.61□□□□□ -0.23
NECTIN4-201ENST00000368012 MYOM1P52179 1685 aa13.61□□□□□ -0.23
NECTIN4-201ENST00000368012 NLRP1Q9C000 1473 aa13.6□□□□□ -0.23
NECTIN4-201ENST00000368012 CLCN1P35523 988 aa13.6□□□□□ -0.23
NECTIN4-201ENST00000368012 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
NECTIN4-201ENST00000368012 HDAC1Q13547 482 aaPredicted RBP13.6□□□□□ -0.23
NECTIN4-201ENST00000368012 FBXO31Q5XUX0 539 aaPredicted RBP13.6□□□□□ -0.23
NECTIN4-201ENST00000368012 CHD1O14646 1710 aa13.6□□□□□ -0.23
NECTIN4-201ENST00000368012 SMC5Q8IY18 1101 aa13.6□□□□□ -0.23
NECTIN4-201ENST00000368012 LTV1Q96GA3 475 aaPredicted RBP13.6□□□□□ -0.23
NECTIN4-201ENST00000368012 KIAA1211Q6ZU35 1233 aa13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 MCM10Q7L590 875 aa13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 NME9Q86XW9 330 aa13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 CCDC27Q2M243 656 aa13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 NEK4P51957 841 aa13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 SKOR2Q2VWA4 1001 aaPredicted RBP13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 CHMP4BQ9H444 224 aaKnown RBP13.59□□□□□ -0.23
NECTIN4-201ENST00000368012 ZFYVE16Q7Z3T8 1539 aa13.58□□□□□ -0.23
NECTIN4-201ENST00000368012 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.24
NECTIN4-201ENST00000368012 SPHKAPQ2M3C7 1700 aa13.58□□□□□ -0.24
NECTIN4-201ENST00000368012 PKP1Q13835 747 aa13.58□□□□□ -0.24
NECTIN4-201ENST00000368012 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
NECTIN4-201ENST00000368012 F6X3S4 739 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 ST18O60284 1047 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 GNAI1P63096 354 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 TAOK2Q9UL54 1235 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 TXNDC2Q86VQ3 553 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 GDPD2Q9HCC8 539 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 MBIPQ9NS73 344 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 MAP4K4O95819 1239 aaPredicted RBP13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 SULT6B1Q6IMI4 303 aa13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 ZGPATQ8N5A5 531 aaKnown RBP13.57□□□□□ -0.24
NECTIN4-201ENST00000368012 CHMP3Q9Y3E7 222 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms