RNA–Protein interactions for RNA: ENST00000366959.4

RPS6KC1-201, Transcript of ribosomal protein S6 kinase C1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RPS6KC1, Length 5,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-201ENST00000366959 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
RPS6KC1-201ENST00000366959 MAP4K4O95819 1239 aaPredicted RBP17.18■□□□□ 0.34
RPS6KC1-201ENST00000366959 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
RPS6KC1-201ENST00000366959 CCDC47Q96A33 483 aaKnown RBP17.18■□□□□ 0.34
RPS6KC1-201ENST00000366959 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
RPS6KC1-201ENST00000366959 TTLL5Q6EMB2 1281 aa17.17■□□□□ 0.34
RPS6KC1-201ENST00000366959 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
RPS6KC1-201ENST00000366959 MBD3O95983 291 aa17.17■□□□□ 0.34
RPS6KC1-201ENST00000366959 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
RPS6KC1-201ENST00000366959 KIAA1107Q9UPP5 1409 aa17.16■□□□□ 0.34
RPS6KC1-201ENST00000366959 PSMA5P28066 241 aa17.16■□□□□ 0.34
RPS6KC1-201ENST00000366959 GCC1Q96CN9 775 aa17.16■□□□□ 0.34
RPS6KC1-201ENST00000366959 ATF7IPQ6VMQ6 1270 aa17.16■□□□□ 0.34
RPS6KC1-201ENST00000366959 NAP1L1P55209 391 aaKnown RBP17.16■□□□□ 0.34
RPS6KC1-201ENST00000366959 TEX35Q5T0J7 233 aa17.15■□□□□ 0.34
RPS6KC1-201ENST00000366959 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
RPS6KC1-201ENST00000366959 CDK19Q9BWU1 502 aa17.15■□□□□ 0.34
RPS6KC1-201ENST00000366959 SIL1Q9H173 461 aa17.15■□□□□ 0.34
RPS6KC1-201ENST00000366959 TSPY26PQ9H489 355 aa17.15■□□□□ 0.34
RPS6KC1-201ENST00000366959 GNAI2P04899 355 aa17.15■□□□□ 0.34
RPS6KC1-201ENST00000366959 ESCO1Q5FWF5 840 aa17.15■□□□□ 0.34
RPS6KC1-201ENST00000366959 STK3Q13188 491 aa17.14■□□□□ 0.34
RPS6KC1-201ENST00000366959 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
RPS6KC1-201ENST00000366959 ATF3P18847 181 aa17.14■□□□□ 0.33
RPS6KC1-201ENST00000366959 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.33
RPS6KC1-201ENST00000366959 C11orf95C9JLR9 678 aaPredicted RBP17.14■□□□□ 0.33
RPS6KC1-201ENST00000366959 RRS1Q15050 365 aaKnown RBP17.14■□□□□ 0.33
RPS6KC1-201ENST00000366959 GAS2L2Q8NHY3 880 aa17.14■□□□□ 0.33
RPS6KC1-201ENST00000366959 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
RPS6KC1-201ENST00000366959 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
RPS6KC1-201ENST00000366959 TRIM34Q9BYJ4 488 aa17.13■□□□□ 0.33
RPS6KC1-201ENST00000366959 SMC2O95347 1197 aa17.13■□□□□ 0.33
RPS6KC1-201ENST00000366959 SETQ01105 290 aaPredicted RBP17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 OLFM4Q6UX06 510 aa17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 THUMPD2Q9BTF0 503 aaKnown RBP17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 TCEAL9Q9UHQ7 104 aa17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 SCAPERQ9BY12 1400 aa17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 ARGLU1Q9NWB6 273 aaPredicted RBP17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
RPS6KC1-201ENST00000366959 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
RPS6KC1-201ENST00000366959 SMG6Q86US8 1419 aaKnown RBP17.11■□□□□ 0.33
RPS6KC1-201ENST00000366959 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
RPS6KC1-201ENST00000366959 MCM2P49736 904 aa17.1■□□□□ 0.33
RPS6KC1-201ENST00000366959 GRPEL1Q9HAV7 217 aa17.1■□□□□ 0.33
RPS6KC1-201ENST00000366959 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
RPS6KC1-201ENST00000366959 IL1RAPL2Q9NP60 686 aa17.1■□□□□ 0.33
RPS6KC1-201ENST00000366959 MCM4P33991 863 aa17.1■□□□□ 0.33
RPS6KC1-201ENST00000366959 PDCP20941 246 aa17.09■□□□□ 0.33
RPS6KC1-201ENST00000366959 CCDC173Q0VFZ6 552 aa17.09■□□□□ 0.33
RPS6KC1-201ENST00000366959 NESP48681 1621 aa17.09■□□□□ 0.33
RPS6KC1-201ENST00000366959 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
RPS6KC1-201ENST00000366959 SLC26A8Q96RN1 970 aa17.09■□□□□ 0.33
RPS6KC1-201ENST00000366959 ERBINQ96RT1 1412 aa17.09■□□□□ 0.33
RPS6KC1-201ENST00000366959 RBM42Q9BTD8 480 aaKnown RBP17.09■□□□□ 0.33
RPS6KC1-201ENST00000366959 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
RPS6KC1-201ENST00000366959 WDR63Q8IWG1 891 aa17.08■□□□□ 0.33
RPS6KC1-201ENST00000366959 RAPGEF3O95398 923 aa17.08■□□□□ 0.33
RPS6KC1-201ENST00000366959 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
RPS6KC1-201ENST00000366959 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
RPS6KC1-201ENST00000366959 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
RPS6KC1-201ENST00000366959 HSP90B2PQ58FF3 399 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 STK38Q15208 465 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 RUFY1Q96T51 708 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 CYP46A1Q9Y6A2 500 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 MYL6BP14649 208 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 TMEM57Q8N5G2 664 aa17.07■□□□□ 0.32
RPS6KC1-201ENST00000366959 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
RPS6KC1-201ENST00000366959 SLFN5Q08AF3 891 aa17.06■□□□□ 0.32
RPS6KC1-201ENST00000366959 OFD1O75665 1012 aa17.05■□□□□ 0.32
RPS6KC1-201ENST00000366959 ZNF530Q6P9A1 599 aaPredicted RBP17.05■□□□□ 0.32
RPS6KC1-201ENST00000366959 LETM1O95202 739 aaPredicted RBP17.05■□□□□ 0.32
RPS6KC1-201ENST00000366959 SRCIN1Q9C0H9 1055 aa17.05■□□□□ 0.32
RPS6KC1-201ENST00000366959 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
RPS6KC1-201ENST00000366959 GPRASP1Q5JY77 1395 aa17.04■□□□□ 0.32
RPS6KC1-201ENST00000366959 TBC1D2BQ9UPU7 963 aa17.04■□□□□ 0.32
RPS6KC1-201ENST00000366959 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
RPS6KC1-201ENST00000366959 DCTN1Q14203 1278 aa17.04■□□□□ 0.32
RPS6KC1-201ENST00000366959 CWC22Q9HCG8 908 aaKnown RBP17.04■□□□□ 0.32
RPS6KC1-201ENST00000366959 EXOC6BQ9Y2D4 811 aa17.04■□□□□ 0.32
RPS6KC1-201ENST00000366959 LARP1BQ659C4 914 aaKnown RBP17.04■□□□□ 0.32
RPS6KC1-201ENST00000366959 BRMS1Q9HCU9 246 aa17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 ME1P48163 572 aa17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 CCT4P50991 539 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 CWC27Q6UX04 472 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 CCDC43Q96MW1 224 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 XBP1P17861 261 aa17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 CAGE1Q8TC20 777 aa17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 WDR33Q9C0J8 1336 aaKnown RBP17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 XPCQ01831 940 aaPredicted RBP17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 TNMDQ9H2S6 317 aa17.03■□□□□ 0.32
RPS6KC1-201ENST00000366959 DAPK1P53355 1430 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms