RNA–Protein interactions for RNA: ENST00000366889.6

PACRG-203, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-203ENST00000366889 ATAD2Q6PL18 1390 aa11.91□□□□□ -0.5
PACRG-203ENST00000366889 FAM212AQ96EL1 285 aa11.91□□□□□ -0.5
PACRG-203ENST00000366889 METP08581 1390 aa11.9□□□□□ -0.5
PACRG-203ENST00000366889 TMEM132EQ6IEE7 984 aa11.9□□□□□ -0.5
PACRG-203ENST00000366889 CCDC61Q9Y6R9 512 aa11.9□□□□□ -0.5
PACRG-203ENST00000366889 PTPRUQ92729 1446 aa11.89□□□□□ -0.51
PACRG-203ENST00000366889 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
PACRG-203ENST00000366889 SBNO2Q9Y2G9 1366 aa11.88□□□□□ -0.51
PACRG-203ENST00000366889 SLC24A1O60721 1099 aa11.88□□□□□ -0.51
PACRG-203ENST00000366889 RBM6P78332 1123 aaKnown RBP11.88□□□□□ -0.51
PACRG-203ENST00000366889 NHSL1Q5SYE7 1610 aa11.87□□□□□ -0.51
PACRG-203ENST00000366889 QTRT2Q9H974 415 aaKnown RBP11.87□□□□□ -0.51
PACRG-203ENST00000366889 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
PACRG-203ENST00000366889 TMF1P82094 1093 aa11.86□□□□□ -0.51
PACRG-203ENST00000366889 DCAF8Q5TAQ9 597 aa11.86□□□□□ -0.51
PACRG-203ENST00000366889 C8orf37Q96NL8 207 aa11.86□□□□□ -0.51
PACRG-203ENST00000366889 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
PACRG-203ENST00000366889 ARHGEF28Q8N1W1 1705 aaKnown RBP11.86□□□□□ -0.51
PACRG-203ENST00000366889 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
PACRG-203ENST00000366889 AMOTL2Q9Y2J4 779 aa11.86□□□□□ -0.51
PACRG-203ENST00000366889 LRPPRCP42704 1394 aaKnown RBP11.85□□□□□ -0.51
PACRG-203ENST00000366889 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
PACRG-203ENST00000366889 PIK3R4Q99570 1358 aa11.85□□□□□ -0.51
PACRG-203ENST00000366889 XRN1Q8IZH2 1706 aaKnown RBP11.84□□□□□ -0.51
PACRG-203ENST00000366889 GABBR2O75899 941 aa11.84□□□□□ -0.51
PACRG-203ENST00000366889 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
PACRG-203ENST00000366889 CDCA8Q53HL2 280 aa11.83□□□□□ -0.52
PACRG-203ENST00000366889 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
PACRG-203ENST00000366889 BRINP3Q76B58 766 aa11.82□□□□□ -0.52
PACRG-203ENST00000366889 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
PACRG-203ENST00000366889 TECPR2O15040 1411 aa11.82□□□□□ -0.52
PACRG-203ENST00000366889 GSE1Q14687 1217 aa11.81□□□□□ -0.52
PACRG-203ENST00000366889 STK26Q9P289 416 aa11.81□□□□□ -0.52
PACRG-203ENST00000366889 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
PACRG-203ENST00000366889 PUS7Q96PZ0 661 aaKnown RBP11.81□□□□□ -0.52
PACRG-203ENST00000366889 PNPLA6Q8IY17 1366 aa11.8□□□□□ -0.52
PACRG-203ENST00000366889 ROBO2Q9HCK4 1378 aa11.8□□□□□ -0.52
PACRG-203ENST00000366889 POLR3GLQ9BT43 218 aa11.8□□□□□ -0.52
PACRG-203ENST00000366889 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
PACRG-203ENST00000366889 C14orf37Q86TY3 774 aa11.79□□□□□ -0.52
PACRG-203ENST00000366889 KIF12Q96FN5 646 aa11.79□□□□□ -0.52
PACRG-203ENST00000366889 BRWD3Q6RI45 1802 aa11.79□□□□□ -0.52
PACRG-203ENST00000366889 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
PACRG-203ENST00000366889 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
PACRG-203ENST00000366889 ANP32CO43423 234 aa11.77□□□□□ -0.52
PACRG-203ENST00000366889 ADAMTS2O95450 1211 aa11.77□□□□□ -0.52
PACRG-203ENST00000366889 CLCN6P51797 869 aa11.77□□□□□ -0.52
PACRG-203ENST00000366889 WAPLQ7Z5K2 1190 aa11.77□□□□□ -0.52
PACRG-203ENST00000366889 POGKQ9P215 609 aa11.77□□□□□ -0.52
PACRG-203ENST00000366889 TULP4Q9NRJ4 1543 aa11.77□□□□□ -0.53
PACRG-203ENST00000366889 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
PACRG-203ENST00000366889 PYGBP11216 843 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 DEFB132Q7Z7B7 95 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 EVC2Q86UK5 1308 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 PLEKHH1Q9ULM0 1364 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 NALCNQ8IZF0 1738 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 ATRNO75882 1429 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 PTCH1Q13635 1447 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 NCOA3Q9Y6Q9 1424 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 PER1O15534 1290 aaPredicted RBP11.76□□□□□ -0.53
PACRG-203ENST00000366889 NGLY1Q96IV0 654 aa11.76□□□□□ -0.53
PACRG-203ENST00000366889 MYOM1P52179 1685 aa11.75□□□□□ -0.53
PACRG-203ENST00000366889 MAP3K13O43283 966 aa11.75□□□□□ -0.53
PACRG-203ENST00000366889 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
PACRG-203ENST00000366889 MS4A3Q96HJ5 214 aa11.75□□□□□ -0.53
PACRG-203ENST00000366889 MST1RQ04912 1400 aa11.74□□□□□ -0.53
PACRG-203ENST00000366889 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
PACRG-203ENST00000366889 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
PACRG-203ENST00000366889 ATF3P18847 181 aa11.74□□□□□ -0.53
PACRG-203ENST00000366889 CCER2I3L3R5 266 aa11.73□□□□□ -0.53
PACRG-203ENST00000366889 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
PACRG-203ENST00000366889 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
PACRG-203ENST00000366889 PRKRIP1Q9H875 184 aaPredicted RBP11.73□□□□□ -0.53
PACRG-203ENST00000366889 PANK3Q9H999 370 aa11.73□□□□□ -0.53
PACRG-203ENST00000366889 USP21Q9UK80 565 aa11.73□□□□□ -0.53
PACRG-203ENST00000366889 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
PACRG-203ENST00000366889 MARF1Q9Y4F3 1742 aaKnown RBP11.73□□□□□ -0.53
PACRG-203ENST00000366889 BLMP54132 1417 aaPredicted RBP11.72□□□□□ -0.53
PACRG-203ENST00000366889 ADGRL3Q9HAR2 1447 aa11.72□□□□□ -0.53
PACRG-203ENST00000366889 NINLQ9Y2I6 1382 aa11.71□□□□□ -0.54
PACRG-203ENST00000366889 CCDC125Q86Z20 511 aa11.7□□□□□ -0.54
PACRG-203ENST00000366889 TRPC5Q9UL62 973 aaPredicted RBP11.7□□□□□ -0.54
PACRG-203ENST00000366889 ADGRB2O60241 1585 aa11.7□□□□□ -0.54
PACRG-203ENST00000366889 GLI3P10071 1580 aa11.7□□□□□ -0.54
PACRG-203ENST00000366889 KTN1Q86UP2 1357 aaKnown RBP11.7□□□□□ -0.54
PACRG-203ENST00000366889 PELP1Q8IZL8 1130 aaKnown RBP11.7□□□□□ -0.54
PACRG-203ENST00000366889 LRRC59Q96AG4 307 aaKnown RBP11.7□□□□□ -0.54
PACRG-203ENST00000366889 CDK19Q9BWU1 502 aa11.7□□□□□ -0.54
PACRG-203ENST00000366889 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
PACRG-203ENST00000366889 DCCP43146 1447 aa11.69□□□□□ -0.54
PACRG-203ENST00000366889 WASLO00401 505 aaPredicted RBP11.69□□□□□ -0.54
PACRG-203ENST00000366889 YY1P25490 414 aa11.69□□□□□ -0.54
PACRG-203ENST00000366889 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
PACRG-203ENST00000366889 NPC1L1Q9UHC9 1359 aa11.68□□□□□ -0.54
PACRG-203ENST00000366889 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
PACRG-203ENST00000366889 SLC12A5Q9H2X9 1139 aa11.68□□□□□ -0.54
PACRG-203ENST00000366889 COL22A1Q8NFW1 1626 aaPredicted RBP11.68□□□□□ -0.54
PACRG-203ENST00000366889 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.67□□□□□ -0.54
PACRG-203ENST00000366889 CHRM1P11229 460 aaPredicted RBP11.67□□□□□ -0.54
PACRG-203ENST00000366889 RALBP1Q15311 655 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms