RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 ATAD2Q6PL18 1390 aa29.67■■■□□ 2.34
PARP1-202ENST00000366792 ST20-MTHFSA0A0A6YYL1 179 aa29.67■■■□□ 2.34
PARP1-202ENST00000366792 USP21Q9UK80 565 aa29.67■■■□□ 2.34
PARP1-202ENST00000366792 USP47Q96K76 1375 aa29.65■■■□□ 2.34
PARP1-202ENST00000366792 FNBP4Q8N3X1 1017 aaPredicted RBP29.64■■■□□ 2.34
PARP1-202ENST00000366792 QTRT2Q9H974 415 aaKnown RBP29.63■■■□□ 2.33
PARP1-202ENST00000366792 RXRBP28702 533 aa29.62■■■□□ 2.33
PARP1-202ENST00000366792 NUTM2GQ5VZR2 741 aa29.62■■■□□ 2.33
PARP1-202ENST00000366792 CRYBG1Q9Y4K1 1723 aa29.61■■■□□ 2.33
PARP1-202ENST00000366792 USP6P35125 1406 aa29.61■■■□□ 2.33
PARP1-202ENST00000366792 ABTB2Q8N961 1025 aa29.6■■■□□ 2.33
PARP1-202ENST00000366792 TESK2Q96S53 571 aa29.6■■■□□ 2.33
PARP1-202ENST00000366792 BRD4O60885 1362 aaPredicted RBP29.58■■■□□ 2.33
PARP1-202ENST00000366792 AKAP12Q02952 1782 aa29.57■■■□□ 2.32
PARP1-202ENST00000366792 BCL9LQ86UU0 1499 aa29.57■■■□□ 2.32
PARP1-202ENST00000366792 TRPC5Q9UL62 973 aaPredicted RBP29.57■■■□□ 2.32
PARP1-202ENST00000366792 TMC1Q8TDI8 760 aa29.56■■■□□ 2.32
PARP1-202ENST00000366792 PLCH1Q4KWH8 1693 aa29.56■■■□□ 2.32
PARP1-202ENST00000366792 PHRF1Q9P1Y6 1649 aaKnown RBP29.56■■■□□ 2.32
PARP1-202ENST00000366792 SLIT2O94813 1529 aa29.55■■■□□ 2.32
PARP1-202ENST00000366792 SLC24A1O60721 1099 aa29.55■■■□□ 2.32
PARP1-202ENST00000366792 RBM6P78332 1123 aaKnown RBP29.55■■■□□ 2.32
PARP1-202ENST00000366792 ZNF692Q9BU19 519 aaPredicted RBP29.55■■■□□ 2.32
PARP1-202ENST00000366792 ATRNO75882 1429 aa29.54■■■□□ 2.32
PARP1-202ENST00000366792 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.53■■■□□ 2.32
PARP1-202ENST00000366792 FAM83GA6ND36 823 aa29.52■■■□□ 2.32
PARP1-202ENST00000366792 UNC5CLQ8IV45 518 aa29.52■■■□□ 2.32
PARP1-202ENST00000366792 CPSF1Q10570 1443 aaKnown RBP29.52■■■□□ 2.32
PARP1-202ENST00000366792 KTN1Q86UP2 1357 aaKnown RBP29.52■■■□□ 2.32
PARP1-202ENST00000366792 PUS7Q96PZ0 661 aaKnown RBP29.51■■■□□ 2.31
PARP1-202ENST00000366792 SSH2Q76I76 1423 aa29.51■■■□□ 2.31
PARP1-202ENST00000366792 NWD2Q9ULI1 1742 aa29.51■■■□□ 2.31
PARP1-202ENST00000366792 CDK12Q9NYV4 1490 aaPredicted RBP29.5■■■□□ 2.31
PARP1-202ENST00000366792 TMF1P82094 1093 aa29.5■■■□□ 2.31
PARP1-202ENST00000366792 NLRP13Q86W25 1043 aa29.5■■■□□ 2.31
PARP1-202ENST00000366792 COL14A1Q05707 1796 aaKnown RBP29.49■■■□□ 2.31
PARP1-202ENST00000366792 PRDM11Q9NQV5 511 aa29.49■■■□□ 2.31
PARP1-202ENST00000366792 MON2Q7Z3U7 1717 aa29.48■■■□□ 2.31
PARP1-202ENST00000366792 SLC12A5Q9H2X9 1139 aa29.48■■■□□ 2.31
PARP1-202ENST00000366792 NRKQ7Z2Y5 1582 aa29.47■■■□□ 2.31
PARP1-202ENST00000366792 USP19O94966 1318 aa29.47■■■□□ 2.31
PARP1-202ENST00000366792 TTC21BQ7Z4L5 1316 aa29.47■■■□□ 2.31
PARP1-202ENST00000366792 PIK3C2AO00443 1686 aa29.47■■■□□ 2.31
PARP1-202ENST00000366792 NLRP6P59044 892 aa29.47■■■□□ 2.31
PARP1-202ENST00000366792 HDGFL2Q7Z4V5 671 aaPredicted RBP29.47■■■□□ 2.31
PARP1-202ENST00000366792 KIAA0232Q92628 1395 aa29.47■■■□□ 2.31
PARP1-202ENST00000366792 RGS12O14924 1447 aa29.46■■■□□ 2.31
PARP1-202ENST00000366792 ZC3H6P61129 1189 aaKnown RBP29.46■■■□□ 2.31
PARP1-202ENST00000366792 CD163L1Q9NR16 1453 aa29.46■■■□□ 2.31
PARP1-202ENST00000366792 BTG4Q9NY30 223 aa29.45■■■□□ 2.31
PARP1-202ENST00000366792 TERF2IPQ9NYB0 399 aa29.44■■■□□ 2.3
PARP1-202ENST00000366792 TTC21AQ8NDW8 1320 aa29.44■■■□□ 2.3
PARP1-202ENST00000366792 NINLQ9Y2I6 1382 aa29.43■■■□□ 2.3
PARP1-202ENST00000366792 GJD4Q96KN9 370 aaPredicted RBP29.43■■■□□ 2.3
PARP1-202ENST00000366792 NRAPQ86VF7 1730 aa29.42■■■□□ 2.3
PARP1-202ENST00000366792 CHRNA2Q15822 529 aa29.42■■■□□ 2.3
PARP1-202ENST00000366792 CCDC9Q9Y3X0 531 aaKnown RBP29.42■■■□□ 2.3
PARP1-202ENST00000366792 A0A1W2PP64 1363 aa29.41■■■□□ 2.3
PARP1-202ENST00000366792 GCP02774 474 aa29.41■■■□□ 2.3
PARP1-202ENST00000366792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.41■■■□□ 2.3
PARP1-202ENST00000366792 VPS72Q15906 364 aa29.4■■■□□ 2.3
PARP1-202ENST00000366792 CDCA8Q53HL2 280 aa29.4■■■□□ 2.3
PARP1-202ENST00000366792 SLIT3O75094 1523 aa29.39■■■□□ 2.3
PARP1-202ENST00000366792 GLI3P10071 1580 aa29.39■■■□□ 2.29
PARP1-202ENST00000366792 EIF4G2P78344 907 aaKnown RBP eCLIP29.38■■■□□ 2.29
PARP1-202ENST00000366792 CPDO75976 1380 aa29.37■■■□□ 2.29
PARP1-202ENST00000366792 EDC4Q6P2E9 1401 aaKnown RBP29.37■■■□□ 2.29
PARP1-202ENST00000366792 ZBTB7CA1YPR0 619 aa29.35■■■□□ 2.29
PARP1-202ENST00000366792 HSPA5P11021 654 aaKnown RBP29.33■■■□□ 2.29
PARP1-202ENST00000366792 NME9Q86XW9 330 aa29.33■■■□□ 2.29
PARP1-202ENST00000366792 SOX12O15370 315 aa29.32■■■□□ 2.28
PARP1-202ENST00000366792 ANKRD36BQ8N2N9 1353 aa29.31■■■□□ 2.28
PARP1-202ENST00000366792 STRN4Q9NRL3 753 aa29.31■■■□□ 2.28
PARP1-202ENST00000366792 ZRANB1Q9UGI0 708 aa29.31■■■□□ 2.28
PARP1-202ENST00000366792 KCNH5Q8NCM2 988 aa29.3■■■□□ 2.28
PARP1-202ENST00000366792 LMO7Q8WWI1 1683 aa29.3■■■□□ 2.28
PARP1-202ENST00000366792 USP31Q70CQ4 1352 aa29.28■■■□□ 2.28
PARP1-202ENST00000366792 CAMTA1Q9Y6Y1 1673 aa29.28■■■□□ 2.28
PARP1-202ENST00000366792 EVA1CP58658 441 aa29.28■■■□□ 2.28
PARP1-202ENST00000366792 USP54Q70EL1 1684 aa29.28■■■□□ 2.28
PARP1-202ENST00000366792 POLR3GLQ9BT43 218 aa29.27■■■□□ 2.28
PARP1-202ENST00000366792 MYOM1P52179 1685 aa29.27■■■□□ 2.28
PARP1-202ENST00000366792 SPATA31A5Q5VU36 1347 aa29.25■■■□□ 2.27
PARP1-202ENST00000366792 SPATA31A7Q8IWB4 1347 aa29.25■■■□□ 2.27
PARP1-202ENST00000366792 A0A0G2JS52 829 aa29.25■■■□□ 2.27
PARP1-202ENST00000366792 MYT1Q01538 1121 aa29.25■■■□□ 2.27
PARP1-202ENST00000366792 NFAT5O94916 1531 aa29.25■■■□□ 2.27
PARP1-202ENST00000366792 AATKQ6ZMQ8 1374 aa29.24■■■□□ 2.27
PARP1-202ENST00000366792 FAM98CQ17RN3 349 aaKnown RBP29.23■■■□□ 2.27
PARP1-202ENST00000366792 SEPT12Q8IYM1 358 aa29.23■■■□□ 2.27
PARP1-202ENST00000366792 ARHGEF25Q86VW2 580 aa29.21■■■□□ 2.27
PARP1-202ENST00000366792 COL5A2P05997 1499 aaPredicted RBP29.21■■■□□ 2.27
PARP1-202ENST00000366792 SPATA31A1Q5TZJ5 1347 aa29.2■■■□□ 2.27
PARP1-202ENST00000366792 OVOS2A0A0J9YW53 1432 aa29.2■■■□□ 2.27
PARP1-202ENST00000366792 OVOS2Q6IE36 1432 aa29.2■■■□□ 2.27
PARP1-202ENST00000366792 LARP1Q6PKG0 1096 aaKnown RBP29.2■■■□□ 2.26
PARP1-202ENST00000366792 UPF1Q92900 1129 aaKnown RBP eCLIP29.2■■■□□ 2.26
PARP1-202ENST00000366792 BRWD3Q6RI45 1802 aa29.2■■■□□ 2.26
PARP1-202ENST00000366792 COL18A1P39060 1754 aa29.19■■■□□ 2.26
PARP1-202ENST00000366792 ONECUT3O60422 494 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms