RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CCER2I3L3R5 266 aa16.58■□□□□ 0.25
CAPN9-203ENST00000366666 TNNT2P45379 298 aaPredicted RBP16.58■□□□□ 0.25
CAPN9-203ENST00000366666 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.25
CAPN9-203ENST00000366666 DCCP43146 1447 aa16.58■□□□□ 0.24
CAPN9-203ENST00000366666 NME9Q86XW9 330 aa16.58■□□□□ 0.24
CAPN9-203ENST00000366666 MYBBP1AQ9BQG0 1328 aaKnown RBP16.57■□□□□ 0.24
CAPN9-203ENST00000366666 SSH2Q76I76 1423 aa16.57■□□□□ 0.24
CAPN9-203ENST00000366666 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
CAPN9-203ENST00000366666 FOXO3O43524 673 aa16.55■□□□□ 0.24
CAPN9-203ENST00000366666 PPP2R1AP30153 589 aa16.55■□□□□ 0.24
CAPN9-203ENST00000366666 XPCQ01831 940 aaPredicted RBP16.55■□□□□ 0.24
CAPN9-203ENST00000366666 CADPS2Q86UW7 1296 aa16.55■□□□□ 0.24
CAPN9-203ENST00000366666 DDX17Q92841 729 aaKnown RBP16.55■□□□□ 0.24
CAPN9-203ENST00000366666 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
CAPN9-203ENST00000366666 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
CAPN9-203ENST00000366666 FBLN1P23142 703 aa16.55■□□□□ 0.24
CAPN9-203ENST00000366666 MRS2Q9HD23 443 aa16.55■□□□□ 0.24
CAPN9-203ENST00000366666 MORC1Q86VD1 984 aa16.54■□□□□ 0.24
CAPN9-203ENST00000366666 PIK3C2AO00443 1686 aa16.53■□□□□ 0.24
CAPN9-203ENST00000366666 NSD2O96028 1365 aa16.52■□□□□ 0.24
CAPN9-203ENST00000366666 KIF1AQ12756 1690 aa16.51■□□□□ 0.23
CAPN9-203ENST00000366666 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
CAPN9-203ENST00000366666 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
CAPN9-203ENST00000366666 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
CAPN9-203ENST00000366666 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
CAPN9-203ENST00000366666 SLAIN2Q9P270 581 aa16.5■□□□□ 0.23
CAPN9-203ENST00000366666 MAP2P11137 1827 aaKnown RBP16.5■□□□□ 0.23
CAPN9-203ENST00000366666 PAK3O75914 559 aaPredicted RBP16.5■□□□□ 0.23
CAPN9-203ENST00000366666 PSME1Q06323 249 aa16.5■□□□□ 0.23
CAPN9-203ENST00000366666 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
CAPN9-203ENST00000366666 BRINP3Q76B58 766 aa16.49■□□□□ 0.23
CAPN9-203ENST00000366666 BRD4O60885 1362 aaPredicted RBP16.49■□□□□ 0.23
CAPN9-203ENST00000366666 OVOS2A0A0J9YW53 1432 aa16.47■□□□□ 0.23
CAPN9-203ENST00000366666 OVOS2Q6IE36 1432 aa16.47■□□□□ 0.23
CAPN9-203ENST00000366666 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
CAPN9-203ENST00000366666 MTHFSP49914 203 aa16.46■□□□□ 0.23
CAPN9-203ENST00000366666 KRT28Q7Z3Y7 464 aa16.46■□□□□ 0.23
CAPN9-203ENST00000366666 COG3Q96JB2 828 aa16.46■□□□□ 0.23
CAPN9-203ENST00000366666 ANP32EQ9BTT0 268 aa16.46■□□□□ 0.23
CAPN9-203ENST00000366666 TTC21AQ8NDW8 1320 aa16.46■□□□□ 0.23
CAPN9-203ENST00000366666 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
CAPN9-203ENST00000366666 PNISRQ8TF01 805 aaKnown RBP16.45■□□□□ 0.22
CAPN9-203ENST00000366666 SOX12O15370 315 aa16.45■□□□□ 0.22
CAPN9-203ENST00000366666 PLEKHG5O94827 1062 aa16.44■□□□□ 0.22
CAPN9-203ENST00000366666 PXDNQ92626 1479 aa16.43■□□□□ 0.22
CAPN9-203ENST00000366666 NLRP6P59044 892 aa16.43■□□□□ 0.22
CAPN9-203ENST00000366666 RRS1Q15050 365 aaKnown RBP16.43■□□□□ 0.22
CAPN9-203ENST00000366666 ALS2Q96Q42 1657 aa16.43■□□□□ 0.22
CAPN9-203ENST00000366666 POLKQ9UBT6 870 aa16.43■□□□□ 0.22
CAPN9-203ENST00000366666 EMILIN1Q9Y6C2 1016 aa16.43■□□□□ 0.22
CAPN9-203ENST00000366666 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
CAPN9-203ENST00000366666 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
CAPN9-203ENST00000366666 ROBO1Q9Y6N7 1651 aa16.42■□□□□ 0.22
CAPN9-203ENST00000366666 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
CAPN9-203ENST00000366666 USP31Q70CQ4 1352 aa16.42■□□□□ 0.22
CAPN9-203ENST00000366666 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
CAPN9-203ENST00000366666 NPHP3Q7Z494 1330 aa16.4■□□□□ 0.22
CAPN9-203ENST00000366666 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
CAPN9-203ENST00000366666 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
CAPN9-203ENST00000366666 NHSL1Q5SYE7 1610 aa16.4■□□□□ 0.22
CAPN9-203ENST00000366666 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
CAPN9-203ENST00000366666 COL3A1P02461 1466 aaPredicted RBP16.38■□□□□ 0.21
CAPN9-203ENST00000366666 ADAMTS8Q9UP79 889 aa16.37■□□□□ 0.21
CAPN9-203ENST00000366666 LTN1O94822 1766 aa16.36■□□□□ 0.21
CAPN9-203ENST00000366666 MED1Q15648 1581 aaPredicted RBP16.36■□□□□ 0.21
CAPN9-203ENST00000366666 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
CAPN9-203ENST00000366666 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
CAPN9-203ENST00000366666 MAP3K19Q56UN5 1328 aa16.35■□□□□ 0.21
CAPN9-203ENST00000366666 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
CAPN9-203ENST00000366666 SBNO1A3KN83 1393 aa16.35■□□□□ 0.21
CAPN9-203ENST00000366666 NFAT5O94916 1531 aa16.35■□□□□ 0.21
CAPN9-203ENST00000366666 CABLES1Q8TDN4 633 aa16.35■□□□□ 0.21
CAPN9-203ENST00000366666 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
CAPN9-203ENST00000366666 PNPLA6Q8IY17 1366 aa16.35■□□□□ 0.21
CAPN9-203ENST00000366666 PIP4K2BP78356 416 aa16.34■□□□□ 0.21
CAPN9-203ENST00000366666 CRYBG1Q9Y4K1 1723 aa16.34■□□□□ 0.21
CAPN9-203ENST00000366666 SLIT3O75094 1523 aa16.33■□□□□ 0.2
CAPN9-203ENST00000366666 PHRF1Q9P1Y6 1649 aaKnown RBP16.33■□□□□ 0.2
CAPN9-203ENST00000366666 CDK12Q9NYV4 1490 aaPredicted RBP16.32■□□□□ 0.2
CAPN9-203ENST00000366666 HNRNPUQ00839 825 aaKnown RBP eCLIP16.32■□□□□ 0.2
CAPN9-203ENST00000366666 USP19O94966 1318 aa16.32■□□□□ 0.2
CAPN9-203ENST00000366666 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
CAPN9-203ENST00000366666 GCP02774 474 aa16.31■□□□□ 0.2
CAPN9-203ENST00000366666 WDR43Q15061 677 aaKnown RBP eCLIP16.31■□□□□ 0.2
CAPN9-203ENST00000366666 HSP90AB2PQ58FF8 381 aa16.31■□□□□ 0.2
CAPN9-203ENST00000366666 CERKQ8TCT0 537 aa16.31■□□□□ 0.2
CAPN9-203ENST00000366666 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
CAPN9-203ENST00000366666 INSRP06213 1382 aa16.3■□□□□ 0.2
CAPN9-203ENST00000366666 TOM1O60784 492 aa16.3■□□□□ 0.2
CAPN9-203ENST00000366666 CCDC146Q8IYE0 955 aa16.3■□□□□ 0.2
CAPN9-203ENST00000366666 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
CAPN9-203ENST00000366666 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
CAPN9-203ENST00000366666 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
CAPN9-203ENST00000366666 ZBTB7CA1YPR0 619 aa16.29■□□□□ 0.2
CAPN9-203ENST00000366666 PHLPP1O60346 1717 aa16.29■□□□□ 0.2
CAPN9-203ENST00000366666 DIAPH1O60610 1272 aaKnown RBP16.28■□□□□ 0.2
CAPN9-203ENST00000366666 ABCA3Q99758 1704 aa16.28■□□□□ 0.2
CAPN9-203ENST00000366666 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
CAPN9-203ENST00000366666 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
CAPN9-203ENST00000366666 IL13P35225 146 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms