RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ZFP64Q9NPA5 681 aa1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 CNTNAP5Q8WYK1 1306 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 RCCD1A6NED2 376 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 ADAMTS2O95450 1211 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 BMP2P12643 396 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 MMP16P51512 607 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 WDR4P57081 412 aaKnown RBP1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 SKOR1P84550 965 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 SRSF11Q05519 484 aaKnown RBP1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 NNTQ13423 1086 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 GRIPAP1Q4V328 841 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 RNFT1Q5M7Z0 435 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 C6orf118Q5T5N4 469 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 BRICD5Q6PL45 260 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 SV2AQ7L0J3 742 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 CCDC24Q8N4L8 307 aa1.98□□□□□ -2.09
RNU6-54P-201ENST00000365563 CDC14CA4D256 554 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 PIK3R2O00459 728 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 SIAH2O43255 324 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 PAX4O43316 350 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 CELA2BP08218 269 aaPredicted RBP1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 TIMP2P16035 220 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 OSBPP22059 807 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 PRIM1P49642 420 aaKnown RBP1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 NKX1-1Q15270 411 aaPredicted RBP1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 ARTNQ5T4W7 220 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 LYPD4Q6UWN0 246 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 RDH13Q8NBN7 331 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 KRTAP9-3Q9BYQ3 159 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 SEMA6BQ9H3T3 888 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 SLC27A5Q9Y2P5 690 aa1.97□□□□□ -2.09
RNU6-54P-201ENST00000365563 DXOO77932 396 aaKnown RBP1.96□□□□□ -2.1
RNU6-54P-201ENST00000365563 PTSQ03393 145 aa1.96□□□□□ -2.1
RNU6-54P-201ENST00000365563 FUT2Q10981 343 aa1.96□□□□□ -2.1
RNU6-54P-201ENST00000365563 PKD2Q13563 968 aa1.96□□□□□ -2.1
RNU6-54P-201ENST00000365563 LCE4AQ5TA78 99 aa1.96□□□□□ -2.1
RNU6-54P-201ENST00000365563 LINC00528Q8N1L1 170 aa1.96□□□□□ -2.1
RNU6-54P-201ENST00000365563 NPDC1Q9NQX5 325 aaPredicted RBP1.96□□□□□ -2.1
RNU6-54P-201ENST00000365563 ADGRG1Q9Y653 693 aa1.96□□□□□ -2.1
RNU6-54P-201ENST00000365563 SOS2Q07890 1332 aaPredicted RBP1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 KRBA1A5PL33 1030 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 BCRP11274 1271 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 ITGA6P23229 1130 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 COL9A3Q14050 684 aaPredicted RBP1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 MPNDQ8N594 471 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 CCDC155Q8N6L0 562 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 LRRC4BQ9NT99 713 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 DNMT3LQ9UJW3 386 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 MKL2Q9ULH7 1088 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 TLL2Q9Y6L7 1015 aa1.95□□□□□ -2.1
RNU6-54P-201ENST00000365563 TTLL8A6PVC2 850 aa1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 ZIC2O95409 532 aaPredicted RBP1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 OATP04181 439 aa1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 VARSP26640 1264 aaKnown RBP1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 RNF19BQ6ZMZ0 732 aa1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 SULF1Q8IWU6 871 aa1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 VWA5B2Q8N398 1253 aa1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 USB1Q9BQ65 265 aaKnown RBP1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 MBIPQ9NS73 344 aa1.94□□□□□ -2.1
RNU6-54P-201ENST00000365563 SPTLC1O15269 473 aa1.93□□□□□ -2.1
RNU6-54P-201ENST00000365563 MCTP1Q6DN14 999 aa1.93□□□□□ -2.1
RNU6-54P-201ENST00000365563 FOXR1Q6PIV2 292 aa1.93□□□□□ -2.1
RNU6-54P-201ENST00000365563 SH3RF1Q7Z6J0 888 aa1.93□□□□□ -2.1
RNU6-54P-201ENST00000365563 MEIOBQ8N635 442 aa1.93□□□□□ -2.1
RNU6-54P-201ENST00000365563 TSEN34Q9BSV6 310 aaKnown RBP1.93□□□□□ -2.1
RNU6-54P-201ENST00000365563 NSFL1CQ9UNZ2 370 aaKnown RBP1.93□□□□□ -2.1
RNU6-54P-201ENST00000365563 GTPBP6O43824 516 aaPredicted RBP1.92□□□□□ -2.1
RNU6-54P-201ENST00000365563 GCGRP47871 477 aa1.92□□□□□ -2.1
RNU6-54P-201ENST00000365563 LRP8Q14114 963 aa1.92□□□□□ -2.1
RNU6-54P-201ENST00000365563 GRIN2CQ14957 1233 aa1.92□□□□□ -2.1
RNU6-54P-201ENST00000365563 FAM174AQ8TBP5 190 aa1.92□□□□□ -2.1
RNU6-54P-201ENST00000365563 ARIH1Q9Y4X5 557 aaPredicted RBP1.92□□□□□ -2.1
RNU6-54P-201ENST00000365563 SLC35F4A4IF30 521 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 DDX11L8A8MPP1 907 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 C1QTNF9BB2RNN3 333 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 JUNDP17535 347 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 ITGB7P26010 798 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 SH3BP2P78314 561 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 PTGDRQ13258 359 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 NR5A1Q13285 461 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 CADPS2Q86UW7 1296 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 PXYLP1Q8TE99 480 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 NUDT12Q9BQG2 462 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 KLF16Q9BXK1 252 aaPredicted RBP1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 ZFAND3Q9H8U3 227 aa1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 NOP53Q9NZM5 478 aaKnown RBP1.91□□□□□ -2.1
RNU6-54P-201ENST00000365563 IGF1RP08069 1367 aa1.9□□□□□ -2.11
RNU6-54P-201ENST00000365563 DOC2BQ14184 412 aa1.9□□□□□ -2.11
RNU6-54P-201ENST00000365563 ITPKCQ96DU7 683 aa1.9□□□□□ -2.11
RNU6-54P-201ENST00000365563 GMCL1Q96IK5 515 aa1.9□□□□□ -2.11
RNU6-54P-201ENST00000365563 FMNL2Q96PY5 1086 aa1.9□□□□□ -2.11
RNU6-54P-201ENST00000365563 RRAGCQ9HB90 399 aa1.9□□□□□ -2.11
RNU6-54P-201ENST00000365563 DAXXQ9UER7 740 aaPredicted RBP1.9□□□□□ -2.11
RNU6-54P-201ENST00000365563 FIGNL2A6NMB9 653 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 GNB5O14775 395 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 OIP5O43482 229 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 CCNYL3P0C7X3 344 aa1.89□□□□□ -2.11
RNU6-54P-201ENST00000365563 GATA4P43694 442 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms