RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 TREML4Q6UXN2 200 aa4.38□□□□□ -1.71
RNU4-41P-201ENST00000364426 BAP1Q92560 729 aa4.38□□□□□ -1.71
RNU4-41P-201ENST00000364426 KIFC2Q96AC6 838 aa4.38□□□□□ -1.71
RNU4-41P-201ENST00000364426 LIMD1Q9UGP4 676 aa4.38□□□□□ -1.71
RNU4-41P-201ENST00000364426 PLEKHG3A1L390 1219 aa4.37□□□□□ -1.71
RNU4-41P-201ENST00000364426 QPCTQ16769 361 aa4.36□□□□□ -1.71
RNU4-41P-201ENST00000364426 LINC01559Q495D7 138 aa4.36□□□□□ -1.71
RNU4-41P-201ENST00000364426 CABLES1Q8TDN4 633 aa4.36□□□□□ -1.71
RNU4-41P-201ENST00000364426 CDK15Q96Q40 435 aa4.36□□□□□ -1.71
RNU4-41P-201ENST00000364426 RSPH6AQ9H0K4 717 aa4.36□□□□□ -1.71
RNU4-41P-201ENST00000364426 WASF2Q9Y6W5 498 aa4.36□□□□□ -1.71
RNU4-41P-201ENST00000364426 SNRPBP14678 240 aaKnown RBP4.35□□□□□ -1.71
RNU4-41P-201ENST00000364426 CTHP32929 405 aa4.35□□□□□ -1.71
RNU4-41P-201ENST00000364426 CLK2P49760 499 aaKnown RBP4.35□□□□□ -1.71
RNU4-41P-201ENST00000364426 NFX1Q12986 1120 aaKnown RBP4.35□□□□□ -1.71
RNU4-41P-201ENST00000364426 ARMC2Q8NEN0 867 aa4.35□□□□□ -1.71
RNU4-41P-201ENST00000364426 MAP10Q9P2G4 905 aa4.35□□□□□ -1.71
RNU4-41P-201ENST00000364426 CAPN5O15484 640 aaPredicted RBP4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 PER1O15534 1290 aaPredicted RBP4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 WFS1O76024 890 aa4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 ADH1CP00326 375 aa4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 TRIM46Q7Z4K8 759 aa4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 SH3RF1Q7Z6J0 888 aa4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 HELBQ8NG08 1087 aaPredicted RBP4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 FAM174AQ8TBP5 190 aa4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 C1QTNF2Q9BXJ5 285 aa4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 KLF16Q9BXK1 252 aaPredicted RBP4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 TLL2Q9Y6L7 1015 aa4.34□□□□□ -1.71
RNU4-41P-201ENST00000364426 NUTM2BA6NNL0 878 aaPredicted RBP4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 NUTM2EB1AL46 878 aaPredicted RBP4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 WIPF1O43516 503 aa4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 NNTQ13423 1086 aa4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 CSPP1Q1MSJ5 1256 aa4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 RTL5Q5HYW3 569 aaPredicted RBP4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 NUTM2DQ5VT03 806 aaPredicted RBP4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 BPHLQ86WA6 291 aaPredicted RBP4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 NUTM2AQ8IVF1 878 aaPredicted RBP4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 GPKOWQ92917 476 aaPredicted RBP eCLIP4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 FOXJ1Q92949 421 aa4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 MAP4K5Q9Y4K4 846 aa4.33□□□□□ -1.72
RNU4-41P-201ENST00000364426 TERTO14746 1132 aaKnown RBP4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 TIMP2P16035 220 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 NR5A1Q13285 461 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 SKIV2LQ15477 1246 aaKnown RBP4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 C4orf48Q5BLP8 95 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 SH3D19Q5HYK7 790 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 NBPF14Q5TI25 921 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 PPP2R2DQ66LE6 453 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 SH3BP5LQ7L8J4 393 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 NPAS3Q8IXF0 933 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 TRMT44Q8IYL2 757 aaKnown RBP4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 BCANQ96GW7 911 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 DDRGK1Q96HY6 314 aa4.32□□□□□ -1.72
RNU4-41P-201ENST00000364426 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
RNU4-41P-201ENST00000364426 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU4-41P-201ENST00000364426 BMP1P13497 986 aa4.3□□□□□ -1.72
RNU4-41P-201ENST00000364426 GRM5P41594 1212 aa4.3□□□□□ -1.72
RNU4-41P-201ENST00000364426 WDR4P57081 412 aaKnown RBP4.3□□□□□ -1.72
RNU4-41P-201ENST00000364426 MRPL14Q6P1L8 145 aaKnown RBP4.3□□□□□ -1.72
RNU4-41P-201ENST00000364426 KDM4CQ9H3R0 1056 aa4.3□□□□□ -1.72
RNU4-41P-201ENST00000364426 POLR3EQ9NVU0 708 aa4.3□□□□□ -1.72
RNU4-41P-201ENST00000364426 NXF1Q9UBU9 619 aaKnown RBP4.3□□□□□ -1.72
RNU4-41P-201ENST00000364426 ZC3H4Q9UPT8 1303 aaKnown RBP4.29□□□□□ -1.72
RNU4-41P-201ENST00000364426 NR3C2P08235 984 aa4.29□□□□□ -1.72
RNU4-41P-201ENST00000364426 TSC1Q92574 1164 aa4.29□□□□□ -1.72
RNU4-41P-201ENST00000364426 ZFP42Q96MM3 310 aa4.29□□□□□ -1.72
RNU4-41P-201ENST00000364426 CTDSPL2Q05D32 466 aa4.28□□□□□ -1.72
RNU4-41P-201ENST00000364426 SCARF1Q14162 830 aa4.28□□□□□ -1.72
RNU4-41P-201ENST00000364426 AGERQ15109 404 aa4.28□□□□□ -1.72
RNU4-41P-201ENST00000364426 FBXO31Q5XUX0 539 aaPredicted RBP4.28□□□□□ -1.72
RNU4-41P-201ENST00000364426 PDXDC2PQ6P474 469 aa4.28□□□□□ -1.72
RNU4-41P-201ENST00000364426 FAM117AQ9C073 453 aa4.28□□□□□ -1.72
RNU4-41P-201ENST00000364426 GPBP1L1Q9HC44 474 aaPredicted RBP4.28□□□□□ -1.72
RNU4-41P-201ENST00000364426 GOPCQ9HD26 462 aa4.28□□□□□ -1.72
RNU4-41P-201ENST00000364426 ZIC2O95409 532 aaPredicted RBP4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 INSM1Q01101 510 aaPredicted RBP4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 ARID5BQ14865 1188 aa4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 ERFEQ4G0M1 354 aa4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 MEIOBQ8N635 442 aa4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 SLC16A10Q8TF71 515 aa4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 ITPKCQ96DU7 683 aa4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 FKBPLQ9UIM3 349 aa4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 CDV3Q9UKY7 258 aaKnown RBP4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 GPSM3Q9Y4H4 160 aa4.27□□□□□ -1.73
RNU4-41P-201ENST00000364426 H3BM21 787 aa4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 SLC24A1O60721 1099 aa4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 FSHRP23945 695 aa4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 VASH1Q7L8A9 365 aaPredicted RBP4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 PROCA1Q8NCQ7 364 aaPredicted RBP4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 LRRN4Q8WUT4 740 aa4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 PURBQ96QR8 312 aaKnown RBP4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 ZFAND3Q9H8U3 227 aa4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 STK17AQ9UEE5 414 aa4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 EMILIN1Q9Y6C2 1016 aa4.26□□□□□ -1.73
RNU4-41P-201ENST00000364426 MAGEB6P1A0A0J9YX57 407 aa4.25□□□□□ -1.73
RNU4-41P-201ENST00000364426 VSIG8P0DPA2 414 aa4.25□□□□□ -1.73
RNU4-41P-201ENST00000364426 CCDC116Q8IYX3 515 aa4.25□□□□□ -1.73
RNU4-41P-201ENST00000364426 LINC00528Q8N1L1 170 aa4.25□□□□□ -1.73
RNU4-41P-201ENST00000364426 IRF7Q92985 503 aa4.25□□□□□ -1.73
RNU4-41P-201ENST00000364426 ARHGAP9Q9BRR9 750 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms