RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 DIXDC1Q155Q3 683 aa8.3□□□□□ -1.08
RNU6-839P-201ENST00000363347 RC3H1Q5TC82 1133 aaKnown RBP8.3□□□□□ -1.08
RNU6-839P-201ENST00000363347 BMP1P13497 986 aa8.29□□□□□ -1.08
RNU6-839P-201ENST00000363347 HOMEZQ8IX15 550 aa8.29□□□□□ -1.08
RNU6-839P-201ENST00000363347 SPIRE2Q8WWL2 714 aa8.29□□□□□ -1.08
RNU6-839P-201ENST00000363347 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.29□□□□□ -1.08
RNU6-839P-201ENST00000363347 UBTFP17480 764 aaKnown RBP8.28□□□□□ -1.08
RNU6-839P-201ENST00000363347 TRIM46Q7Z4K8 759 aa8.28□□□□□ -1.08
RNU6-839P-201ENST00000363347 LIMD1Q9UGP4 676 aa8.28□□□□□ -1.08
RNU6-839P-201ENST00000363347 ALDH1A1P00352 501 aa8.27□□□□□ -1.09
RNU6-839P-201ENST00000363347 WNT7BP56706 349 aa8.27□□□□□ -1.09
RNU6-839P-201ENST00000363347 NUTM1Q86Y26 1132 aa8.27□□□□□ -1.09
RNU6-839P-201ENST00000363347 CLUAP1Q96AJ1 413 aa8.27□□□□□ -1.09
RNU6-839P-201ENST00000363347 SKOR1P84550 965 aa8.26□□□□□ -1.09
RNU6-839P-201ENST00000363347 Q3C1V9 767 aa8.26□□□□□ -1.09
RNU6-839P-201ENST00000363347 GRIPAP1Q4V328 841 aa8.26□□□□□ -1.09
RNU6-839P-201ENST00000363347 RIC3Q7Z5B4 369 aa8.26□□□□□ -1.09
RNU6-839P-201ENST00000363347 CSPP1Q1MSJ5 1256 aa8.25□□□□□ -1.09
RNU6-839P-201ENST00000363347 ARID3CA6NKF2 412 aa8.24□□□□□ -1.09
RNU6-839P-201ENST00000363347 CAPN5O15484 640 aaPredicted RBP8.24□□□□□ -1.09
RNU6-839P-201ENST00000363347 DXOO77932 396 aaKnown RBP8.24□□□□□ -1.09
RNU6-839P-201ENST00000363347 RFC5P40937 340 aa8.24□□□□□ -1.09
RNU6-839P-201ENST00000363347 KCNMA1Q12791 1236 aa8.24□□□□□ -1.09
RNU6-839P-201ENST00000363347 FBXO31Q5XUX0 539 aaPredicted RBP8.24□□□□□ -1.09
RNU6-839P-201ENST00000363347 KCTD17Q8N5Z5 321 aa8.24□□□□□ -1.09
RNU6-839P-201ENST00000363347 MOXD2PA6NHM9 499 aa8.23□□□□□ -1.09
RNU6-839P-201ENST00000363347 SPTLC1O15269 473 aa8.23□□□□□ -1.09
RNU6-839P-201ENST00000363347 RSBN1LQ6PCB5 846 aaPredicted RBP8.23□□□□□ -1.09
RNU6-839P-201ENST00000363347 A6NJR5 290 aa8.22□□□□□ -1.09
RNU6-839P-201ENST00000363347 CCDC24Q8N4L8 307 aa8.22□□□□□ -1.09
RNU6-839P-201ENST00000363347 ARID3AQ99856 593 aa8.22□□□□□ -1.09
RNU6-839P-201ENST00000363347 C1orf115Q9H7X2 142 aa8.22□□□□□ -1.09
RNU6-839P-201ENST00000363347 NDUFV2P19404 249 aa8.21□□□□□ -1.1
RNU6-839P-201ENST00000363347 USB1Q9BQ65 265 aaKnown RBP8.21□□□□□ -1.1
RNU6-839P-201ENST00000363347 SPDYE5A6NIY4 337 aa8.2□□□□□ -1.1
RNU6-839P-201ENST00000363347 APBB1O00213 710 aa8.2□□□□□ -1.1
RNU6-839P-201ENST00000363347 KDM4AO75164 1064 aa8.2□□□□□ -1.1
RNU6-839P-201ENST00000363347 TUSC1Q2TAM9 212 aa8.2□□□□□ -1.1
RNU6-839P-201ENST00000363347 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
RNU6-839P-201ENST00000363347 POM121Q96HA1 1249 aa8.2□□□□□ -1.1
RNU6-839P-201ENST00000363347 WASF2Q9Y6W5 498 aa8.2□□□□□ -1.1
RNU6-839P-201ENST00000363347 SIAH2O43255 324 aa8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 RAD21O60216 631 aa8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 TRAK2O60296 914 aa8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 GSK3AP49840 483 aa8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 QPCTQ16769 361 aa8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 PROSER2Q86WR7 435 aaPredicted RBP8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 BANK1Q8NDB2 785 aa8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 ZFP42Q96MM3 310 aa8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 SNRKQ9NRH2 765 aa8.19□□□□□ -1.1
RNU6-839P-201ENST00000363347 VSIG8P0DPA2 414 aa8.18□□□□□ -1.1
RNU6-839P-201ENST00000363347 TMEM259Q4ZIN3 620 aa8.18□□□□□ -1.1
RNU6-839P-201ENST00000363347 EHBP1Q8NDI1 1231 aa8.18□□□□□ -1.1
RNU6-839P-201ENST00000363347 PCDHB15Q9Y5E8 787 aa8.18□□□□□ -1.1
RNU6-839P-201ENST00000363347 HOXA2O43364 376 aa8.17□□□□□ -1.1
RNU6-839P-201ENST00000363347 GJA5P36382 358 aa8.17□□□□□ -1.1
RNU6-839P-201ENST00000363347 USP46P62068 366 aa8.17□□□□□ -1.1
RNU6-839P-201ENST00000363347 NUTM2BA6NNL0 878 aaPredicted RBP8.16□□□□□ -1.1
RNU6-839P-201ENST00000363347 NUTM2EB1AL46 878 aaPredicted RBP8.16□□□□□ -1.1
RNU6-839P-201ENST00000363347 LILRB3O75022 631 aa8.16□□□□□ -1.1
RNU6-839P-201ENST00000363347 NUTM2DQ5VT03 806 aaPredicted RBP8.16□□□□□ -1.1
RNU6-839P-201ENST00000363347 NUTM2AQ8IVF1 878 aaPredicted RBP8.16□□□□□ -1.1
RNU6-839P-201ENST00000363347 CABLES1Q8TDN4 633 aa8.16□□□□□ -1.1
RNU6-839P-201ENST00000363347 AP1G2O75843 785 aa8.15□□□□□ -1.1
RNU6-839P-201ENST00000363347 FDX1P10109 184 aa8.15□□□□□ -1.1
RNU6-839P-201ENST00000363347 GUCA2AQ02747 115 aa8.15□□□□□ -1.1
RNU6-839P-201ENST00000363347 RTL5Q5HYW3 569 aaPredicted RBP8.15□□□□□ -1.1
RNU6-839P-201ENST00000363347 TMEM151AQ8N4L1 468 aa8.15□□□□□ -1.1
RNU6-839P-201ENST00000363347 MTMR14Q8NCE2 650 aa8.15□□□□□ -1.1
RNU6-839P-201ENST00000363347 HLA-CQ95604 372 aa8.15□□□□□ -1.1
RNU6-839P-201ENST00000363347 COG6Q9Y2V7 657 aa8.15□□□□□ -1.1
RNU6-839P-201ENST00000363347 ZBTB3Q9H5J0 574 aa8.14□□□□□ -1.11
RNU6-839P-201ENST00000363347 GDF11O95390 407 aa8.13□□□□□ -1.11
RNU6-839P-201ENST00000363347 PRPF38BQ5VTL8 546 aaKnown RBP8.13□□□□□ -1.11
RNU6-839P-201ENST00000363347 USP17L8P0C7I0 530 aa8.12□□□□□ -1.11
RNU6-839P-201ENST00000363347 HRCP23327 699 aa8.12□□□□□ -1.11
RNU6-839P-201ENST00000363347 RASSF7Q02833 373 aa8.12□□□□□ -1.11
RNU6-839P-201ENST00000363347 FNBP4Q8N3X1 1017 aaPredicted RBP8.12□□□□□ -1.11
RNU6-839P-201ENST00000363347 CCDC82Q8N4S0 544 aa8.12□□□□□ -1.11
RNU6-839P-201ENST00000363347 ZNF777Q9ULD5 760 aaPredicted RBP8.12□□□□□ -1.11
RNU6-839P-201ENST00000363347 PCDHGC3Q9UN70 934 aa8.12□□□□□ -1.11
RNU6-839P-201ENST00000363347 JUNDP17535 347 aa8.11□□□□□ -1.11
RNU6-839P-201ENST00000363347 SCARF1Q14162 830 aa8.11□□□□□ -1.11
RNU6-839P-201ENST00000363347 MRPL14Q6P1L8 145 aaKnown RBP8.11□□□□□ -1.11
RNU6-839P-201ENST00000363347 GDPD2Q9HCC8 539 aa8.11□□□□□ -1.11
RNU6-839P-201ENST00000363347 RNF225M0QZC1 329 aaPredicted RBP8.1□□□□□ -1.11
RNU6-839P-201ENST00000363347 PURBQ96QR8 312 aaKnown RBP8.1□□□□□ -1.11
RNU6-839P-201ENST00000363347 SOBPA7XYQ1 873 aa8.09□□□□□ -1.11
RNU6-839P-201ENST00000363347 ABL2P42684 1182 aa8.08□□□□□ -1.12
RNU6-839P-201ENST00000363347 MTMR2Q13614 643 aa8.08□□□□□ -1.12
RNU6-839P-201ENST00000363347 PTCRAQ6ISU1 281 aaPredicted RBP8.08□□□□□ -1.12
RNU6-839P-201ENST00000363347 TSC1Q92574 1164 aa8.08□□□□□ -1.12
RNU6-839P-201ENST00000363347 NUDT12Q9BQG2 462 aa8.08□□□□□ -1.12
RNU6-839P-201ENST00000363347 C6orf229H3BNL8 230 aa8.07□□□□□ -1.12
RNU6-839P-201ENST00000363347 SOCS7O14512 581 aa8.07□□□□□ -1.12
RNU6-839P-201ENST00000363347 SH3BP2P78314 561 aa8.07□□□□□ -1.12
RNU6-839P-201ENST00000363347 PRM3Q9NNZ6 103 aa8.07□□□□□ -1.12
RNU6-839P-201ENST00000363347 TBC1D2BQ9UPU7 963 aa8.07□□□□□ -1.12
RNU6-839P-201ENST00000363347 ZNF330Q9Y3S2 320 aaPredicted RBP8.07□□□□□ -1.12
RNU6-839P-201ENST00000363347 TLL2Q9Y6L7 1015 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms