RNA–Protein interactions for RNA: ENST00000361720.9

GPATCH3-201, Transcript of G-patch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH3, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-201ENST00000361720 NPC1L1Q9UHC9 1359 aa24.77■■□□□ 1.56
GPATCH3-201ENST00000361720 KIF20BQ96Q89 1820 aa24.77■■□□□ 1.56
GPATCH3-201ENST00000361720 CGNL1Q0VF96 1302 aa24.77■■□□□ 1.56
GPATCH3-201ENST00000361720 ORAI2Q96SN7 254 aa24.77■■□□□ 1.56
GPATCH3-201ENST00000361720 NRKQ7Z2Y5 1582 aa24.77■■□□□ 1.56
GPATCH3-201ENST00000361720 MYBBP1AQ9BQG0 1328 aaKnown RBP24.76■■□□□ 1.55
GPATCH3-201ENST00000361720 GGNBP2Q9H3C7 697 aa24.76■■□□□ 1.55
GPATCH3-201ENST00000361720 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
GPATCH3-201ENST00000361720 ESCO1Q5FWF5 840 aa24.75■■□□□ 1.55
GPATCH3-201ENST00000361720 FYB1O15117 783 aa24.74■■□□□ 1.55
GPATCH3-201ENST00000361720 MST1RQ04912 1400 aa24.74■■□□□ 1.55
GPATCH3-201ENST00000361720 POLR3AO14802 1390 aaPredicted RBP24.74■■□□□ 1.55
GPATCH3-201ENST00000361720 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
GPATCH3-201ENST00000361720 NGDNQ8NEJ9 315 aaKnown RBP24.74■■□□□ 1.55
GPATCH3-201ENST00000361720 USP6P35125 1406 aa24.74■■□□□ 1.55
GPATCH3-201ENST00000361720 EDC4Q6P2E9 1401 aaKnown RBP24.74■■□□□ 1.55
GPATCH3-201ENST00000361720 MSH6P52701 1360 aa24.74■■□□□ 1.55
GPATCH3-201ENST00000361720 ATF3P18847 181 aa24.73■■□□□ 1.55
GPATCH3-201ENST00000361720 TNNT2P45379 298 aaPredicted RBP24.73■■□□□ 1.55
GPATCH3-201ENST00000361720 ZRANB1Q9UGI0 708 aa24.73■■□□□ 1.55
GPATCH3-201ENST00000361720 PHF8Q9UPP1 1060 aa24.73■■□□□ 1.55
GPATCH3-201ENST00000361720 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
GPATCH3-201ENST00000361720 NME9Q86XW9 330 aa24.72■■□□□ 1.55
GPATCH3-201ENST00000361720 DCCP43146 1447 aa24.72■■□□□ 1.55
GPATCH3-201ENST00000361720 ANKRD26Q9UPS8 1709 aa24.72■■□□□ 1.55
GPATCH3-201ENST00000361720 PPP2R1AP30153 589 aa24.7■■□□□ 1.54
GPATCH3-201ENST00000361720 ZNF692Q9BU19 519 aaPredicted RBP24.7■■□□□ 1.54
GPATCH3-201ENST00000361720 B4GALNT3Q6L9W6 998 aa24.69■■□□□ 1.54
GPATCH3-201ENST00000361720 MORC1Q86VD1 984 aa24.69■■□□□ 1.54
GPATCH3-201ENST00000361720 SSH2Q76I76 1423 aa24.69■■□□□ 1.54
GPATCH3-201ENST00000361720 TTC21BQ7Z4L5 1316 aa24.68■■□□□ 1.54
GPATCH3-201ENST00000361720 CADPS2Q86UW7 1296 aa24.67■■□□□ 1.54
GPATCH3-201ENST00000361720 XPCQ01831 940 aaPredicted RBP24.67■■□□□ 1.54
GPATCH3-201ENST00000361720 NSD2O96028 1365 aa24.66■■□□□ 1.54
GPATCH3-201ENST00000361720 FOXO3O43524 673 aa24.65■■□□□ 1.54
GPATCH3-201ENST00000361720 DDX17Q92841 729 aaKnown RBP24.65■■□□□ 1.54
GPATCH3-201ENST00000361720 FBLN1P23142 703 aa24.65■■□□□ 1.54
GPATCH3-201ENST00000361720 MSH5O43196 834 aa24.64■■□□□ 1.54
GPATCH3-201ENST00000361720 NLRP13Q86W25 1043 aa24.64■■□□□ 1.54
GPATCH3-201ENST00000361720 PIK3C2AO00443 1686 aa24.64■■□□□ 1.53
GPATCH3-201ENST00000361720 KIF1AQ12756 1690 aa24.62■■□□□ 1.53
GPATCH3-201ENST00000361720 INSRP06213 1382 aa24.6■■□□□ 1.53
GPATCH3-201ENST00000361720 PAK3O75914 559 aaPredicted RBP24.59■■□□□ 1.53
GPATCH3-201ENST00000361720 NUTM2GQ5VZR2 741 aa24.59■■□□□ 1.53
GPATCH3-201ENST00000361720 PSME1Q06323 249 aa24.59■■□□□ 1.53
GPATCH3-201ENST00000361720 MARF1Q9Y4F3 1742 aaKnown RBP24.59■■□□□ 1.53
GPATCH3-201ENST00000361720 SLAIN2Q9P270 581 aa24.58■■□□□ 1.52
GPATCH3-201ENST00000361720 OVOS2A0A0J9YW53 1432 aa24.57■■□□□ 1.52
GPATCH3-201ENST00000361720 OVOS2Q6IE36 1432 aa24.57■■□□□ 1.52
GPATCH3-201ENST00000361720 TRPM3Q9HCF6 1732 aaPredicted RBP24.57■■□□□ 1.52
GPATCH3-201ENST00000361720 BRINP3Q76B58 766 aa24.56■■□□□ 1.52
GPATCH3-201ENST00000361720 MAP2P11137 1827 aaKnown RBP24.56■■□□□ 1.52
GPATCH3-201ENST00000361720 TTC21AQ8NDW8 1320 aa24.56■■□□□ 1.52
GPATCH3-201ENST00000361720 COG3Q96JB2 828 aa24.55■■□□□ 1.52
GPATCH3-201ENST00000361720 MTHFSP49914 203 aa24.54■■□□□ 1.52
GPATCH3-201ENST00000361720 SOX12O15370 315 aa24.53■■□□□ 1.52
GPATCH3-201ENST00000361720 PDE3BQ13370 1112 aa24.53■■□□□ 1.52
GPATCH3-201ENST00000361720 KRT28Q7Z3Y7 464 aa24.53■■□□□ 1.52
GPATCH3-201ENST00000361720 ABTB2Q8N961 1025 aa24.52■■□□□ 1.52
GPATCH3-201ENST00000361720 PLEKHG5O94827 1062 aa24.5■■□□□ 1.51
GPATCH3-201ENST00000361720 CCDC136Q96JN2 1154 aa24.5■■□□□ 1.51
GPATCH3-201ENST00000361720 NLRP6P59044 892 aa24.5■■□□□ 1.51
GPATCH3-201ENST00000361720 RRS1Q15050 365 aaKnown RBP24.5■■□□□ 1.51
GPATCH3-201ENST00000361720 EMILIN1Q9Y6C2 1016 aa24.49■■□□□ 1.51
GPATCH3-201ENST00000361720 USP31Q70CQ4 1352 aa24.49■■□□□ 1.51
GPATCH3-201ENST00000361720 SENP3-EIF4A1A0A087X0R7 540 aa24.48■■□□□ 1.51
GPATCH3-201ENST00000361720 PXDNQ92626 1479 aa24.48■■□□□ 1.51
GPATCH3-201ENST00000361720 POLKQ9UBT6 870 aa24.48■■□□□ 1.51
GPATCH3-201ENST00000361720 USP54Q70EL1 1684 aa24.48■■□□□ 1.51
GPATCH3-201ENST00000361720 BLMP54132 1417 aaPredicted RBP24.47■■□□□ 1.51
GPATCH3-201ENST00000361720 SHPRHQ149N8 1683 aa24.47■■□□□ 1.51
GPATCH3-201ENST00000361720 ALS2Q96Q42 1657 aa24.47■■□□□ 1.51
GPATCH3-201ENST00000361720 LMOD2Q6P5Q4 547 aa24.47■■□□□ 1.51
GPATCH3-201ENST00000361720 NPHP3Q7Z494 1330 aa24.46■■□□□ 1.51
GPATCH3-201ENST00000361720 PPM1GO15355 546 aaPredicted RBP24.46■■□□□ 1.51
GPATCH3-201ENST00000361720 RRP1P56182 461 aaKnown RBP24.45■■□□□ 1.5
GPATCH3-201ENST00000361720 ROBO1Q9Y6N7 1651 aa24.44■■□□□ 1.5
GPATCH3-201ENST00000361720 PEAK1Q9H792 1746 aa24.44■■□□□ 1.5
GPATCH3-201ENST00000361720 COL3A1P02461 1466 aaPredicted RBP24.43■■□□□ 1.5
GPATCH3-201ENST00000361720 ERICH6Q7L0X2 663 aa24.43■■□□□ 1.5
GPATCH3-201ENST00000361720 AATKQ6ZMQ8 1374 aa24.43■■□□□ 1.5
GPATCH3-201ENST00000361720 NHSL1Q5SYE7 1610 aa24.42■■□□□ 1.5
GPATCH3-201ENST00000361720 RCAN3Q9UKA8 241 aa24.41■■□□□ 1.5
GPATCH3-201ENST00000361720 ADAMTS8Q9UP79 889 aa24.4■■□□□ 1.5
GPATCH3-201ENST00000361720 TNS3Q68CZ2 1445 aa24.38■■□□□ 1.49
GPATCH3-201ENST00000361720 SBNO1A3KN83 1393 aa24.38■■□□□ 1.49
GPATCH3-201ENST00000361720 MED1Q15648 1581 aaPredicted RBP24.38■■□□□ 1.49
GPATCH3-201ENST00000361720 SOS2Q07890 1332 aaPredicted RBP24.38■■□□□ 1.49
GPATCH3-201ENST00000361720 MAP3K19Q56UN5 1328 aa24.38■■□□□ 1.49
GPATCH3-201ENST00000361720 NFAT5O94916 1531 aa24.37■■□□□ 1.49
GPATCH3-201ENST00000361720 PNPLA6Q8IY17 1366 aa24.37■■□□□ 1.49
GPATCH3-201ENST00000361720 SPATA31A3Q5VYP0 1347 aa24.36■■□□□ 1.49
GPATCH3-201ENST00000361720 LTN1O94822 1766 aa24.36■■□□□ 1.49
GPATCH3-201ENST00000361720 WDR43Q15061 677 aaKnown RBP eCLIP24.36■■□□□ 1.49
GPATCH3-201ENST00000361720 CFAP53Q96M91 514 aa24.36■■□□□ 1.49
GPATCH3-201ENST00000361720 CDK12Q9NYV4 1490 aaPredicted RBP24.36■■□□□ 1.49
GPATCH3-201ENST00000361720 CABLES1Q8TDN4 633 aa24.35■■□□□ 1.49
GPATCH3-201ENST00000361720 SLIT3O75094 1523 aa24.34■■□□□ 1.49
GPATCH3-201ENST00000361720 PIP4K2BP78356 416 aa24.34■■□□□ 1.49
GPATCH3-201ENST00000361720 USP19O94966 1318 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms