RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 ZBBXA8MT70 800 aa8.8□□□□□ -1
RPL39-201ENST00000361575 ATP9BO43861 1147 aa8.8□□□□□ -1
RPL39-201ENST00000361575 ATG7O95352 703 aa8.8□□□□□ -1
RPL39-201ENST00000361575 FMNL1O95466 1100 aaPredicted RBP8.8□□□□□ -1
RPL39-201ENST00000361575 FAM160A2Q8N612 972 aaPredicted RBP8.8□□□□□ -1
RPL39-201ENST00000361575 OCSTAMPQ9BR26 566 aa8.8□□□□□ -1
RPL39-201ENST00000361575 EIF4G2P78344 907 aaKnown RBP eCLIP8.79□□□□□ -1
RPL39-201ENST00000361575 WBP1LQ9NX94 342 aa8.79□□□□□ -1
RPL39-201ENST00000361575 NR1I2O75469 434 aa8.78□□□□□ -1
RPL39-201ENST00000361575 DXOO77932 396 aaKnown RBP8.78□□□□□ -1
RPL39-201ENST00000361575 KANK4Q5T7N3 995 aaPredicted RBP8.78□□□□□ -1
RPL39-201ENST00000361575 ANKRD13DQ6ZTN6 518 aa8.78□□□□□ -1
RPL39-201ENST00000361575 WNT2BQ93097 391 aa8.78□□□□□ -1
RPL39-201ENST00000361575 PRDM9Q9NQV7 894 aa8.78□□□□□ -1
RPL39-201ENST00000361575 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
RPL39-201ENST00000361575 MSS51Q4VC12 460 aa8.77□□□□□ -1.01
RPL39-201ENST00000361575 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1.01
RPL39-201ENST00000361575 PNMA1Q8ND90 353 aa8.77□□□□□ -1.01
RPL39-201ENST00000361575 FAM174AQ8TBP5 190 aa8.77□□□□□ -1.01
RPL39-201ENST00000361575 GZF1Q9H116 711 aaPredicted RBP8.77□□□□□ -1.01
RPL39-201ENST00000361575 ZC3H4Q9UPT8 1303 aaKnown RBP8.77□□□□□ -1.01
RPL39-201ENST00000361575 GOLGA8CPA6NN73 597 aa8.76□□□□□ -1.01
RPL39-201ENST00000361575 BRD1O95696 1058 aa8.76□□□□□ -1.01
RPL39-201ENST00000361575 MMP16P51512 607 aa8.75□□□□□ -1.01
RPL39-201ENST00000361575 PDE4CQ08493 712 aa8.75□□□□□ -1.01
RPL39-201ENST00000361575 EVA1BQ9NVM1 165 aa8.75□□□□□ -1.01
RPL39-201ENST00000361575 ZMIZ1Q9ULJ6 1067 aa8.75□□□□□ -1.01
RPL39-201ENST00000361575 CCNYL3P0C7X3 344 aa8.74□□□□□ -1.01
RPL39-201ENST00000361575 NFATC2IPQ8NCF5 419 aa8.74□□□□□ -1.01
RPL39-201ENST00000361575 USP17L3A6NCW0 530 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 USP17L4A6NCW7 530 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 TLL1O43897 1013 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 CTHP32929 405 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 COPS2P61201 443 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 KCNA1Q09470 495 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 KCNH2Q12809 1159 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 USP17L2Q6R6M4 530 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 USP17L1Q7RTZ2 530 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 RGS22Q8NE09 1264 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 SPSB2Q99619 263 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 NUDT12Q9BQG2 462 aa8.73□□□□□ -1.01
RPL39-201ENST00000361575 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
RPL39-201ENST00000361575 KRTAP3-2Q9BYR7 98 aa8.72□□□□□ -1.01
RPL39-201ENST00000361575 USP17L5A8MUK1 530 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 TMCO4Q5TGY1 634 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 PDXDC2PQ6P474 469 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 THSD4Q6ZMP0 1018 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 PHTF2Q8N3S3 785 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 STK32AQ8WU08 396 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 STAC3Q96MF2 364 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 VRTNQ9H8Y1 702 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 CEP126Q9P2H0 1117 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 GPSM3Q9Y4H4 160 aa8.71□□□□□ -1.02
RPL39-201ENST00000361575 SKIP12755 728 aa8.7□□□□□ -1.02
RPL39-201ENST00000361575 ELOAQ14241 798 aaKnown RBP8.7□□□□□ -1.02
RPL39-201ENST00000361575 PTCRAQ6ISU1 281 aaPredicted RBP8.7□□□□□ -1.02
RPL39-201ENST00000361575 DEPDC4Q8N2C3 294 aa8.7□□□□□ -1.02
RPL39-201ENST00000361575 MFAP1P55081 439 aaKnown RBP8.69□□□□□ -1.02
RPL39-201ENST00000361575 TMEM164Q5U3C3 297 aa8.69□□□□□ -1.02
RPL39-201ENST00000361575 POTEMA6NI47 508 aa8.68□□□□□ -1.02
RPL39-201ENST00000361575 CRTC2Q53ET0 693 aaPredicted RBP8.68□□□□□ -1.02
RPL39-201ENST00000361575 GPKOWQ92917 476 aaPredicted RBP eCLIP8.68□□□□□ -1.02
RPL39-201ENST00000361575 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
RPL39-201ENST00000361575 CHIC2Q9UKJ5 165 aa8.68□□□□□ -1.02
RPL39-201ENST00000361575 MTMR7Q9Y216 660 aa8.68□□□□□ -1.02
RPL39-201ENST00000361575 ZPR1O75312 459 aa8.67□□□□□ -1.02
RPL39-201ENST00000361575 ADH1BP00325 375 aa8.67□□□□□ -1.02
RPL39-201ENST00000361575 PTK2Q05397 1052 aa8.67□□□□□ -1.02
RPL39-201ENST00000361575 SH3BP5LQ7L8J4 393 aa8.67□□□□□ -1.02
RPL39-201ENST00000361575 ADAM32Q8TC27 787 aa8.67□□□□□ -1.02
RPL39-201ENST00000361575 PATL2C9JE40 543 aaKnown RBP8.66□□□□□ -1.02
RPL39-201ENST00000361575 NCOA4Q13772 614 aa8.66□□□□□ -1.02
RPL39-201ENST00000361575 TSGA10IPQ3SY00 556 aa8.66□□□□□ -1.02
RPL39-201ENST00000361575 PHLDB3Q6NSJ2 640 aa8.66□□□□□ -1.02
RPL39-201ENST00000361575 ARMC2Q8NEN0 867 aa8.66□□□□□ -1.02
RPL39-201ENST00000361575 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
RPL39-201ENST00000361575 NOVA2Q9UNW9 492 aaKnown RBP8.66□□□□□ -1.02
RPL39-201ENST00000361575 PCDHB9Q9Y5E1 797 aa8.66□□□□□ -1.02
RPL39-201ENST00000361575 IVNS1ABPQ9Y6Y0 642 aa8.66□□□□□ -1.02
RPL39-201ENST00000361575 FAM196BA6NMK8 535 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L15C9J2P7 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L13C9JLJ4 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L11C9JVI0 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L21D6R901 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L18D6R9N7 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L22D6RA61 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L17D6RBQ6 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L19D6RCP7 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L20D6RJB6 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 RANGAP1P46060 587 aaPredicted RBP8.65□□□□□ -1.02
RPL39-201ENST00000361575 FAM69CQ0P6D2 419 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 USP17L24Q0WX57 530 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 NBPF14Q5TI25 921 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 TRAF7Q6Q0C0 670 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 MTRQ99707 1265 aa8.65□□□□□ -1.02
RPL39-201ENST00000361575 MKRN1Q9UHC7 482 aaKnown RBP8.65□□□□□ -1.02
RPL39-201ENST00000361575 PTK7Q13308 1070 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms