RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SPG7Q9UQ90 795 aa22.59■■□□□ 1.21
CLIP2-202ENST00000361545 SUPT6HQ7KZ85 1726 aaKnown RBP22.59■■□□□ 1.21
CLIP2-202ENST00000361545 ANO8Q9HCE9 1232 aaPredicted RBP22.59■■□□□ 1.21
CLIP2-202ENST00000361545 RALYLQ86SE5 291 aaKnown RBP22.58■■□□□ 1.21
CLIP2-202ENST00000361545 NUDT16Q96DE0 195 aaKnown RBP22.58■■□□□ 1.21
CLIP2-202ENST00000361545 MTMR7Q9Y216 660 aa22.58■■□□□ 1.2
CLIP2-202ENST00000361545 FSD1Q9BTV5 496 aa22.57■■□□□ 1.2
CLIP2-202ENST00000361545 CEBPAP49715 358 aaPredicted RBP22.57■■□□□ 1.2
CLIP2-202ENST00000361545 DNAJC2Q99543 621 aaKnown RBP22.57■■□□□ 1.2
CLIP2-202ENST00000361545 VPS37CA5D8V6 355 aaPredicted RBP22.56■■□□□ 1.2
CLIP2-202ENST00000361545 MYL6BP14649 208 aa22.56■■□□□ 1.2
CLIP2-202ENST00000361545 SF3B2Q13435 895 aaKnown RBP22.56■■□□□ 1.2
CLIP2-202ENST00000361545 CCDC61Q9Y6R9 512 aa22.55■■□□□ 1.2
CLIP2-202ENST00000361545 CCDC141Q6ZP82 1450 aa22.55■■□□□ 1.2
CLIP2-202ENST00000361545 BECN2A8MW95 431 aa22.55■■□□□ 1.2
CLIP2-202ENST00000361545 FBXO31Q5XUX0 539 aaPredicted RBP22.55■■□□□ 1.2
CLIP2-202ENST00000361545 ATAD2Q6PL18 1390 aa22.54■■□□□ 1.2
CLIP2-202ENST00000361545 NOB1Q9ULX3 412 aaKnown RBP22.54■■□□□ 1.2
CLIP2-202ENST00000361545 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
CLIP2-202ENST00000361545 CNNM1Q9NRU3 951 aa22.53■■□□□ 1.2
CLIP2-202ENST00000361545 ADGRL1O94910 1474 aa22.53■■□□□ 1.2
CLIP2-202ENST00000361545 GRIN2AQ12879 1464 aa22.53■■□□□ 1.2
CLIP2-202ENST00000361545 GOLGA6L19H0YKK7 550 aa22.53■■□□□ 1.2
CLIP2-202ENST00000361545 CEP89Q96ST8 783 aa22.52■■□□□ 1.2
CLIP2-202ENST00000361545 SMC3Q9UQE7 1217 aa22.52■■□□□ 1.2
CLIP2-202ENST00000361545 TBC1D2BQ9UPU7 963 aa22.52■■□□□ 1.2
CLIP2-202ENST00000361545 TPM3P06753 285 aa22.52■■□□□ 1.19
CLIP2-202ENST00000361545 ARID3AQ99856 593 aa22.52■■□□□ 1.19
CLIP2-202ENST00000361545 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
CLIP2-202ENST00000361545 CNTROBQ8N137 903 aa22.51■■□□□ 1.19
CLIP2-202ENST00000361545 BCAR3O75815 825 aa22.51■■□□□ 1.19
CLIP2-202ENST00000361545 CDC45O75419 566 aa22.5■■□□□ 1.19
CLIP2-202ENST00000361545 BICD2Q8TD16 824 aa22.5■■□□□ 1.19
CLIP2-202ENST00000361545 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
CLIP2-202ENST00000361545 GNAI2P04899 355 aa22.5■■□□□ 1.19
CLIP2-202ENST00000361545 WWC1Q8IX03 1113 aa22.5■■□□□ 1.19
CLIP2-202ENST00000361545 KDM4AO75164 1064 aa22.49■■□□□ 1.19
CLIP2-202ENST00000361545 AAMPQ13685 434 aa22.49■■□□□ 1.19
CLIP2-202ENST00000361545 SIL1Q9H173 461 aa22.49■■□□□ 1.19
CLIP2-202ENST00000361545 C22orf23Q9BZE7 217 aa22.49■■□□□ 1.19
CLIP2-202ENST00000361545 NINLQ9Y2I6 1382 aa22.48■■□□□ 1.19
CLIP2-202ENST00000361545 CAMSAP2Q08AD1 1489 aa22.48■■□□□ 1.19
CLIP2-202ENST00000361545 BTBD11A6QL63 1104 aa22.47■■□□□ 1.19
CLIP2-202ENST00000361545 TSR1Q2NL82 804 aaKnown RBP22.47■■□□□ 1.19
CLIP2-202ENST00000361545 PRM3Q9NNZ6 103 aa22.47■■□□□ 1.19
CLIP2-202ENST00000361545 NAIPQ13075 1403 aa22.47■■□□□ 1.19
CLIP2-202ENST00000361545 SAFBQ15424 915 aaKnown RBP eCLIP22.46■■□□□ 1.19
CLIP2-202ENST00000361545 SRCIN1Q9C0H9 1055 aa22.46■■□□□ 1.19
CLIP2-202ENST00000361545 IKQ13123 557 aaPredicted RBP22.46■■□□□ 1.19
CLIP2-202ENST00000361545 NSD3Q9BZ95 1437 aa22.46■■□□□ 1.19
CLIP2-202ENST00000361545 ZNF608Q9ULD9 1512 aaPredicted RBP22.45■■□□□ 1.18
CLIP2-202ENST00000361545 PCF11O94913 1555 aaKnown RBP22.45■■□□□ 1.18
CLIP2-202ENST00000361545 TPM2P07951 284 aa22.45■■□□□ 1.18
CLIP2-202ENST00000361545 CCDC43Q96MW1 224 aaKnown RBP22.45■■□□□ 1.18
CLIP2-202ENST00000361545 FOXO3O43524 673 aa22.44■■□□□ 1.18
CLIP2-202ENST00000361545 IDI1Q13907 227 aa22.44■■□□□ 1.18
CLIP2-202ENST00000361545 AMOTL2Q9Y2J4 779 aa22.44■■□□□ 1.18
CLIP2-202ENST00000361545 SKOR2Q2VWA4 1001 aaPredicted RBP22.44■■□□□ 1.18
CLIP2-202ENST00000361545 TTC39AQ5SRH9 613 aa22.44■■□□□ 1.18
CLIP2-202ENST00000361545 CCDC47Q96A33 483 aaKnown RBP22.44■■□□□ 1.18
CLIP2-202ENST00000361545 KCNH5Q8NCM2 988 aa22.43■■□□□ 1.18
CLIP2-202ENST00000361545 CCDC158Q5M9N0 1113 aa22.43■■□□□ 1.18
CLIP2-202ENST00000361545 PCMTD1Q96MG8 357 aaPredicted RBP22.43■■□□□ 1.18
CLIP2-202ENST00000361545 CCT4P50991 539 aaKnown RBP22.42■■□□□ 1.18
CLIP2-202ENST00000361545 RRP12Q5JTH9 1297 aaKnown RBP22.42■■□□□ 1.18
CLIP2-202ENST00000361545 BICDL1Q6ZP65 573 aa22.42■■□□□ 1.18
CLIP2-202ENST00000361545 ERC1Q8IUD2 1116 aa22.42■■□□□ 1.18
CLIP2-202ENST00000361545 MIS18AQ9NYP9 233 aa22.42■■□□□ 1.18
CLIP2-202ENST00000361545 PDZRN3Q9UPQ7 1066 aa22.42■■□□□ 1.18
CLIP2-202ENST00000361545 ADAMTS2O95450 1211 aa22.41■■□□□ 1.18
CLIP2-202ENST00000361545 DCAF8L1A6NGE4 600 aa22.41■■□□□ 1.18
CLIP2-202ENST00000361545 FCHSD2O94868 740 aa22.41■■□□□ 1.18
CLIP2-202ENST00000361545 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
CLIP2-202ENST00000361545 ABCC5O15440 1437 aa22.4■■□□□ 1.18
CLIP2-202ENST00000361545 WDR63Q8IWG1 891 aa22.4■■□□□ 1.18
CLIP2-202ENST00000361545 CHMP5Q9NZZ3 219 aa22.4■■□□□ 1.18
CLIP2-202ENST00000361545 TPM1P09493 284 aa22.4■■□□□ 1.18
CLIP2-202ENST00000361545 MPHOSPH8Q99549 860 aa22.4■■□□□ 1.18
CLIP2-202ENST00000361545 KIF14Q15058 1648 aa22.4■■□□□ 1.18
CLIP2-202ENST00000361545 NME9Q86XW9 330 aa22.4■■□□□ 1.18
CLIP2-202ENST00000361545 USHBP1Q8N6Y0 703 aa22.4■■□□□ 1.18
CLIP2-202ENST00000361545 GNL3LQ9NVN8 582 aaKnown RBP22.4■■□□□ 1.18
CLIP2-202ENST00000361545 PSMA5P28066 241 aa22.39■■□□□ 1.18
CLIP2-202ENST00000361545 ADGRF5Q8IZF2 1346 aa22.39■■□□□ 1.18
CLIP2-202ENST00000361545 PTCD1O75127 700 aaKnown RBP22.39■■□□□ 1.17
CLIP2-202ENST00000361545 CCDC57Q2TAC2 916 aa22.39■■□□□ 1.17
CLIP2-202ENST00000361545 THUMPD2Q9BTF0 503 aaKnown RBP22.39■■□□□ 1.17
CLIP2-202ENST00000361545 CUL7Q14999 1698 aa22.38■■□□□ 1.17
CLIP2-202ENST00000361545 A0A0U1RQG5 324 aaPredicted RBP22.38■■□□□ 1.17
CLIP2-202ENST00000361545 SART3Q15020 963 aaKnown RBP22.38■■□□□ 1.17
CLIP2-202ENST00000361545 PDE3AQ14432 1141 aa22.38■■□□□ 1.17
CLIP2-202ENST00000361545 CCDC85AQ96PX6 553 aaPredicted RBP22.38■■□□□ 1.17
CLIP2-202ENST00000361545 GNAT3A8MTJ3 354 aa22.38■■□□□ 1.17
CLIP2-202ENST00000361545 STK11IPQ8N1F8 1099 aa22.38■■□□□ 1.17
CLIP2-202ENST00000361545 PHF8Q9UPP1 1060 aa22.38■■□□□ 1.17
CLIP2-202ENST00000361545 MCM10Q7L590 875 aa22.37■■□□□ 1.17
CLIP2-202ENST00000361545 CCDC184Q52MB2 194 aa22.37■■□□□ 1.17
CLIP2-202ENST00000361545 ATF7IPQ6VMQ6 1270 aa22.37■■□□□ 1.17
CLIP2-202ENST00000361545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.37■■□□□ 1.17
CLIP2-202ENST00000361545 HOOK1Q9UJC3 728 aaKnown RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms