RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 A0A0G2JS52 829 aa31.01■■■□□ 2.55
CD47-202ENST00000361309 MYT1Q01538 1121 aa31.01■■■□□ 2.55
CD47-202ENST00000361309 ARHGEF28Q8N1W1 1705 aaKnown RBP31.01■■■□□ 2.55
CD47-202ENST00000361309 ITSN1Q15811 1721 aa30.99■■■□□ 2.55
CD47-202ENST00000361309 FAM98CQ17RN3 349 aaKnown RBP30.99■■■□□ 2.55
CD47-202ENST00000361309 NGDNQ8NEJ9 315 aaKnown RBP30.98■■■□□ 2.55
CD47-202ENST00000361309 PAK3O75914 559 aaPredicted RBP30.95■■■□□ 2.55
CD47-202ENST00000361309 STAC3Q96MF2 364 aa30.95■■■□□ 2.55
CD47-202ENST00000361309 ATP7BP35670 1465 aa30.9■■■□□ 2.54
CD47-202ENST00000361309 SPATA31A5Q5VU36 1347 aa30.9■■■□□ 2.54
CD47-202ENST00000361309 SPATA31A7Q8IWB4 1347 aa30.9■■■□□ 2.54
CD47-202ENST00000361309 RGPD1P0DJD0 1748 aa30.89■■■□□ 2.54
CD47-202ENST00000361309 BAG6P46379 1132 aa30.88■■■□□ 2.53
CD47-202ENST00000361309 NUDT16Q96DE0 195 aaKnown RBP30.88■■■□□ 2.53
CD47-202ENST00000361309 PRDM11Q9NQV5 511 aa30.88■■■□□ 2.53
CD47-202ENST00000361309 PHRF1Q9P1Y6 1649 aaKnown RBP30.87■■■□□ 2.53
CD47-202ENST00000361309 THSD7AQ9UPZ6 1657 aa30.87■■■□□ 2.53
CD47-202ENST00000361309 FAM182BQ5T319 152 aa30.85■■■□□ 2.53
CD47-202ENST00000361309 LRP5O75197 1615 aa30.84■■■□□ 2.53
CD47-202ENST00000361309 HRCP23327 699 aa30.84■■■□□ 2.53
CD47-202ENST00000361309 TOPAZ1Q8N9V7 1692 aa30.83■■■□□ 2.53
CD47-202ENST00000361309 KIAA0232Q92628 1395 aa30.82■■■□□ 2.52
CD47-202ENST00000361309 CDK19Q9BWU1 502 aa30.82■■■□□ 2.52
CD47-202ENST00000361309 PSDA5PKW4 1024 aaPredicted RBP30.81■■■□□ 2.52
CD47-202ENST00000361309 CHRNA2Q15822 529 aa30.81■■■□□ 2.52
CD47-202ENST00000361309 TNS1Q9HBL0 1735 aaKnown RBP30.8■■■□□ 2.52
CD47-202ENST00000361309 KIAA1210Q9ULL0 1709 aa30.8■■■□□ 2.52
CD47-202ENST00000361309 EN1Q05925 392 aaPredicted RBP30.79■■■□□ 2.52
CD47-202ENST00000361309 NUTM2GQ5VZR2 741 aa30.79■■■□□ 2.52
CD47-202ENST00000361309 SPATA31A1Q5TZJ5 1347 aa30.77■■■□□ 2.52
CD47-202ENST00000361309 ZC3H6P61129 1189 aaKnown RBP30.77■■■□□ 2.52
CD47-202ENST00000361309 STRN4Q9NRL3 753 aa30.77■■■□□ 2.52
CD47-202ENST00000361309 POLR3AO14802 1390 aaPredicted RBP30.77■■■□□ 2.52
CD47-202ENST00000361309 ACEP12821 1306 aa30.75■■■□□ 2.51
CD47-202ENST00000361309 NBPF8Q3BBV2 869 aa30.75■■■□□ 2.51
CD47-202ENST00000361309 CCDC61Q9Y6R9 512 aa30.74■■■□□ 2.51
CD47-202ENST00000361309 PLEKHG3A1L390 1219 aa30.71■■■□□ 2.51
CD47-202ENST00000361309 DISP2A7MBM2 1401 aa30.71■■■□□ 2.51
CD47-202ENST00000361309 NRKQ7Z2Y5 1582 aa30.71■■■□□ 2.51
CD47-202ENST00000361309 NBPF1Q3BBV0 1214 aa30.69■■■□□ 2.5
CD47-202ENST00000361309 USP35Q9P2H5 1018 aa30.69■■■□□ 2.5
CD47-202ENST00000361309 EVA1CP58658 441 aa30.67■■■□□ 2.5
CD47-202ENST00000361309 FAM196AQ6ZSG2 479 aa30.67■■■□□ 2.5
CD47-202ENST00000361309 ABTB2Q8N961 1025 aa30.67■■■□□ 2.5
CD47-202ENST00000361309 SSH2Q76I76 1423 aa30.66■■■□□ 2.5
CD47-202ENST00000361309 CAMTA1Q9Y6Y1 1673 aa30.66■■■□□ 2.5
CD47-202ENST00000361309 TRIM37O94972 964 aa30.66■■■□□ 2.5
CD47-202ENST00000361309 EZH2Q15910 746 aaKnown RBP30.66■■■□□ 2.5
CD47-202ENST00000361309 LMO7Q8WWI1 1683 aa30.65■■■□□ 2.5
CD47-202ENST00000361309 R3HDM1Q15032 1099 aaKnown RBP30.65■■■□□ 2.5
CD47-202ENST00000361309 LARP1Q6PKG0 1096 aaKnown RBP30.62■■■□□ 2.49
CD47-202ENST00000361309 BARGINQ6ZT62 677 aa30.62■■■□□ 2.49
CD47-202ENST00000361309 USP19O94966 1318 aa30.62■■■□□ 2.49
CD47-202ENST00000361309 PPIP5K1Q6PFW1 1433 aa30.62■■■□□ 2.49
CD47-202ENST00000361309 SRPK2P78362 688 aaKnown RBP30.61■■■□□ 2.49
CD47-202ENST00000361309 CAMKK2Q96RR4 588 aa30.61■■■□□ 2.49
CD47-202ENST00000361309 CPDO75976 1380 aa30.61■■■□□ 2.49
CD47-202ENST00000361309 QRICH2Q9H0J4 1663 aa30.61■■■□□ 2.49
CD47-202ENST00000361309 CENPJQ9HC77 1338 aaPredicted RBP30.59■■■□□ 2.49
CD47-202ENST00000361309 PDE3BQ13370 1112 aa30.59■■■□□ 2.49
CD47-202ENST00000361309 APBA3O96018 575 aa30.58■■■□□ 2.49
CD47-202ENST00000361309 NLRP13Q86W25 1043 aa30.58■■■□□ 2.49
CD47-202ENST00000361309 CABP2Q9NPB3 220 aa30.58■■■□□ 2.49
CD47-202ENST00000361309 TCP11L2Q8N4U5 519 aa30.57■■■□□ 2.48
CD47-202ENST00000361309 GCP02774 474 aa30.56■■■□□ 2.48
CD47-202ENST00000361309 RREB1Q92766 1687 aa30.55■■■□□ 2.48
CD47-202ENST00000361309 PARD3Q8TEW0 1356 aa30.54■■■□□ 2.48
CD47-202ENST00000361309 PARP4Q9UKK3 1724 aaKnown RBP30.53■■■□□ 2.48
CD47-202ENST00000361309 NUP188Q5SRE5 1749 aa30.53■■■□□ 2.48
CD47-202ENST00000361309 COL5A2P05997 1499 aaPredicted RBP30.51■■■□□ 2.48
CD47-202ENST00000361309 THRAP3Q9Y2W1 955 aaKnown RBP30.51■■■□□ 2.47
CD47-202ENST00000361309 BRD4O60885 1362 aaPredicted RBP30.51■■■□□ 2.47
CD47-202ENST00000361309 CABP1Q9NZU7 370 aa30.49■■■□□ 2.47
CD47-202ENST00000361309 USP6P35125 1406 aa30.48■■■□□ 2.47
CD47-202ENST00000361309 ZBTB7CA1YPR0 619 aa30.47■■■□□ 2.47
CD47-202ENST00000361309 NLRP6P59044 892 aa30.47■■■□□ 2.47
CD47-202ENST00000361309 CRB1P82279 1406 aa30.46■■■□□ 2.47
CD47-202ENST00000361309 SLIT3O75094 1523 aa30.45■■■□□ 2.47
CD47-202ENST00000361309 PIK3C2AO00443 1686 aa30.45■■■□□ 2.46
CD47-202ENST00000361309 SBF2Q86WG5 1849 aa30.44■■■□□ 2.46
CD47-202ENST00000361309 COL18A1P39060 1754 aa30.43■■■□□ 2.46
CD47-202ENST00000361309 L3MBTL2Q969R5 705 aa30.42■■■□□ 2.46
CD47-202ENST00000361309 TRPM1Q7Z4N2 1603 aa30.42■■■□□ 2.46
CD47-202ENST00000361309 PEAK1Q9H792 1746 aa30.42■■■□□ 2.46
CD47-202ENST00000361309 AATKQ6ZMQ8 1374 aa30.41■■■□□ 2.46
CD47-202ENST00000361309 LRRC37A3O60309 1634 aa30.4■■■□□ 2.46
CD47-202ENST00000361309 NBPF14Q5TI25 921 aa30.4■■■□□ 2.46
CD47-202ENST00000361309 RGPD5Q99666 1765 aa30.4■■■□□ 2.46
CD47-202ENST00000361309 WNK3Q9BYP7 1800 aa30.4■■■□□ 2.46
CD47-202ENST00000361309 EVC2Q86UK5 1308 aa30.39■■■□□ 2.46
CD47-202ENST00000361309 AKAP12Q02952 1782 aa30.38■■■□□ 2.45
CD47-202ENST00000361309 OVOS2A0A0G2JMS6 1433 aa30.37■■■□□ 2.45
CD47-202ENST00000361309 OVOS2A0A0J9YW53 1432 aa30.37■■■□□ 2.45
CD47-202ENST00000361309 OVOS2Q6IE36 1432 aa30.37■■■□□ 2.45
CD47-202ENST00000361309 C11orf95C9JLR9 678 aaPredicted RBP30.36■■■□□ 2.45
CD47-202ENST00000361309 TOM1L2Q6ZVM7 507 aa30.36■■■□□ 2.45
CD47-202ENST00000361309 RGPD3A6NKT7 1758 aaPredicted RBP30.34■■■□□ 2.45
CD47-202ENST00000361309 RGPD4Q7Z3J3 1758 aa30.34■■■□□ 2.45
CD47-202ENST00000361309 AXIN2Q9Y2T1 843 aa30.34■■■□□ 2.45
CD47-202ENST00000361309 DDB1Q16531 1140 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms