RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 INSRP06213 1382 aa31.07■■■□□ 2.57
SDF4-202ENST00000360001 ZRANB1Q9UGI0 708 aa31.07■■■□□ 2.56
SDF4-202ENST00000360001 PHF8Q9UPP1 1060 aa31.06■■■□□ 2.56
SDF4-202ENST00000360001 SCAF1Q9H7N4 1312 aaKnown RBP31.04■■■□□ 2.56
SDF4-202ENST00000360001 XIRP1Q702N8 1843 aaKnown RBP31.04■■■□□ 2.56
SDF4-202ENST00000360001 ZNF335Q9H4Z2 1342 aaPredicted RBP31.04■■■□□ 2.56
SDF4-202ENST00000360001 DCCP43146 1447 aa31.04■■■□□ 2.56
SDF4-202ENST00000360001 ADAMTS8Q9UP79 889 aa31.03■■■□□ 2.56
SDF4-202ENST00000360001 BLMP54132 1417 aaPredicted RBP31.03■■■□□ 2.56
SDF4-202ENST00000360001 WDR43Q15061 677 aaKnown RBP eCLIP31.03■■■□□ 2.56
SDF4-202ENST00000360001 COG3Q96JB2 828 aa31.03■■■□□ 2.56
SDF4-202ENST00000360001 TTC21AQ8NDW8 1320 aa31.02■■■□□ 2.56
SDF4-202ENST00000360001 ZBED9Q6R2W3 1325 aa31.02■■■□□ 2.56
SDF4-202ENST00000360001 ESCO1Q5FWF5 840 aa31.01■■■□□ 2.56
SDF4-202ENST00000360001 SHPRHQ149N8 1683 aa31.01■■■□□ 2.56
SDF4-202ENST00000360001 OVOS2A0A0J9YW53 1432 aa31.01■■■□□ 2.55
SDF4-202ENST00000360001 OVOS2Q6IE36 1432 aa31.01■■■□□ 2.55
SDF4-202ENST00000360001 LRRC7Q96NW7 1537 aa31■■■□□ 2.55
SDF4-202ENST00000360001 DMRT2Q9Y5R5 561 aa30.99■■■□□ 2.55
SDF4-202ENST00000360001 C1orf167Q5SNV9 1468 aa30.99■■■□□ 2.55
SDF4-202ENST00000360001 CFAP53Q96M91 514 aa30.98■■■□□ 2.55
SDF4-202ENST00000360001 ORAI2Q96SN7 254 aa30.97■■■□□ 2.55
SDF4-202ENST00000360001 AATKQ6ZMQ8 1374 aa30.97■■■□□ 2.55
SDF4-202ENST00000360001 MST1RQ04912 1400 aa30.97■■■□□ 2.55
SDF4-202ENST00000360001 PIK3C2AO00443 1686 aa30.96■■■□□ 2.55
SDF4-202ENST00000360001 MAP2P11137 1827 aaKnown RBP30.96■■■□□ 2.55
SDF4-202ENST00000360001 ATF3P18847 181 aa30.96■■■□□ 2.55
SDF4-202ENST00000360001 FBLN1P23142 703 aa30.96■■■□□ 2.55
SDF4-202ENST00000360001 COL3A1P02461 1466 aaPredicted RBP30.95■■■□□ 2.54
SDF4-202ENST00000360001 MSH6P52701 1360 aa30.94■■■□□ 2.54
SDF4-202ENST00000360001 POLKQ9UBT6 870 aa30.94■■■□□ 2.54
SDF4-202ENST00000360001 USP31Q70CQ4 1352 aa30.94■■■□□ 2.54
SDF4-202ENST00000360001 PNPLA6Q8IY17 1366 aa30.92■■■□□ 2.54
SDF4-202ENST00000360001 KIF1AQ12756 1690 aa30.92■■■□□ 2.54
SDF4-202ENST00000360001 SMG6Q86US8 1419 aaKnown RBP30.92■■■□□ 2.54
SDF4-202ENST00000360001 CADPS2Q86UW7 1296 aa30.92■■■□□ 2.54
SDF4-202ENST00000360001 SENP3-EIF4A1A0A087X0R7 540 aa30.9■■■□□ 2.54
SDF4-202ENST00000360001 USP54Q70EL1 1684 aa30.89■■■□□ 2.54
SDF4-202ENST00000360001 PSME1Q06323 249 aa30.88■■■□□ 2.53
SDF4-202ENST00000360001 MARF1Q9Y4F3 1742 aaKnown RBP30.87■■■□□ 2.53
SDF4-202ENST00000360001 EMILIN1Q9Y6C2 1016 aa30.87■■■□□ 2.53
SDF4-202ENST00000360001 FOXO3O43524 673 aa30.86■■■□□ 2.53
SDF4-202ENST00000360001 PAK3O75914 559 aaPredicted RBP30.85■■■□□ 2.53
SDF4-202ENST00000360001 CDK12Q9NYV4 1490 aaPredicted RBP30.85■■■□□ 2.53
SDF4-202ENST00000360001 RRS1Q15050 365 aaKnown RBP30.84■■■□□ 2.53
SDF4-202ENST00000360001 NLRP6P59044 892 aa30.83■■■□□ 2.53
SDF4-202ENST00000360001 PPM1GO15355 546 aaPredicted RBP30.83■■■□□ 2.53
SDF4-202ENST00000360001 ABTB2Q8N961 1025 aa30.83■■■□□ 2.53
SDF4-202ENST00000360001 CCDC146Q8IYE0 955 aa30.81■■■□□ 2.52
SDF4-202ENST00000360001 TRPM3Q9HCF6 1732 aaPredicted RBP30.81■■■□□ 2.52
SDF4-202ENST00000360001 DIAPH1O60610 1272 aaKnown RBP30.8■■■□□ 2.52
SDF4-202ENST00000360001 NUDCQ9Y266 331 aa30.79■■■□□ 2.52
SDF4-202ENST00000360001 XPCQ01831 940 aaPredicted RBP30.78■■■□□ 2.52
SDF4-202ENST00000360001 NUTM2GQ5VZR2 741 aa30.78■■■□□ 2.52
SDF4-202ENST00000360001 U2AF1L5P0DN76 240 aaPredicted RBP30.77■■■□□ 2.52
SDF4-202ENST00000360001 U2AF1Q01081 240 aaKnown RBP eCLIP30.77■■■□□ 2.52
SDF4-202ENST00000360001 SALL2Q9Y467 1007 aaPredicted RBP30.77■■■□□ 2.52
SDF4-202ENST00000360001 PEAK1Q9H792 1746 aa30.76■■■□□ 2.52
SDF4-202ENST00000360001 KRT28Q7Z3Y7 464 aa30.76■■■□□ 2.51
SDF4-202ENST00000360001 SOX12O15370 315 aa30.75■■■□□ 2.51
SDF4-202ENST00000360001 U2SURPO15042 1029 aaKnown RBP30.74■■■□□ 2.51
SDF4-202ENST00000360001 MAP3K19Q56UN5 1328 aa30.72■■■□□ 2.51
SDF4-202ENST00000360001 APAF1O14727 1248 aa30.72■■■□□ 2.51
SDF4-202ENST00000360001 RUNDC1Q96C34 613 aa30.72■■■□□ 2.51
SDF4-202ENST00000360001 IL13P35225 146 aa30.71■■■□□ 2.51
SDF4-202ENST00000360001 SLAIN2Q9P270 581 aa30.7■■■□□ 2.5
SDF4-202ENST00000360001 BRINP3Q76B58 766 aa30.69■■■□□ 2.5
SDF4-202ENST00000360001 DDX17Q92841 729 aaKnown RBP30.69■■■□□ 2.5
SDF4-202ENST00000360001 ALS2Q96Q42 1657 aa30.69■■■□□ 2.5
SDF4-202ENST00000360001 NPHP3Q7Z494 1330 aa30.69■■■□□ 2.5
SDF4-202ENST00000360001 IQSEC2Q5JU85 1478 aa30.69■■■□□ 2.5
SDF4-202ENST00000360001 LTBP4Q8N2S1 1624 aa30.68■■■□□ 2.5
SDF4-202ENST00000360001 SBNO1A3KN83 1393 aa30.67■■■□□ 2.5
SDF4-202ENST00000360001 NFAT5O94916 1531 aa30.67■■■□□ 2.5
SDF4-202ENST00000360001 PXDNQ92626 1479 aa30.66■■■□□ 2.5
SDF4-202ENST00000360001 PDE3BQ13370 1112 aa30.66■■■□□ 2.5
SDF4-202ENST00000360001 ZNF521Q96K83 1311 aa30.65■■■□□ 2.5
SDF4-202ENST00000360001 FLT4P35916 1363 aa30.65■■■□□ 2.5
SDF4-202ENST00000360001 PLEKHF1Q96S99 279 aa30.65■■■□□ 2.5
SDF4-202ENST00000360001 SLIT3O75094 1523 aa30.64■■■□□ 2.5
SDF4-202ENST00000360001 HSP90AB2PQ58FF8 381 aa30.64■■■□□ 2.5
SDF4-202ENST00000360001 NGEFQ8N5V2 710 aa30.64■■■□□ 2.5
SDF4-202ENST00000360001 EIF4A2Q14240 407 aaKnown RBP30.63■■■□□ 2.49
SDF4-202ENST00000360001 TCP11L2Q8N4U5 519 aa30.63■■■□□ 2.49
SDF4-202ENST00000360001 KIF24Q5T7B8 1368 aa30.63■■■□□ 2.49
SDF4-202ENST00000360001 USP19O94966 1318 aa30.62■■■□□ 2.49
SDF4-202ENST00000360001 GTF3C3Q9Y5Q9 886 aa30.62■■■□□ 2.49
SDF4-202ENST00000360001 LMOD2Q6P5Q4 547 aa30.61■■■□□ 2.49
SDF4-202ENST00000360001 KCNH5Q8NCM2 988 aa30.61■■■□□ 2.49
SDF4-202ENST00000360001 FCHSD2O94868 740 aa30.61■■■□□ 2.49
SDF4-202ENST00000360001 LTN1O94822 1766 aa30.61■■■□□ 2.49
SDF4-202ENST00000360001 AMPHP49418 695 aa30.6■■■□□ 2.49
SDF4-202ENST00000360001 RSPH6AQ9H0K4 717 aa30.59■■■□□ 2.49
SDF4-202ENST00000360001 TNS3Q68CZ2 1445 aa30.58■■■□□ 2.49
SDF4-202ENST00000360001 CDCA7LQ96GN5 454 aa30.58■■■□□ 2.49
SDF4-202ENST00000360001 PNNQ9H307 717 aaKnown RBP30.58■■■□□ 2.49
SDF4-202ENST00000360001 RGPD1P0DJD0 1748 aa30.58■■■□□ 2.49
SDF4-202ENST00000360001 HOXC9P31274 260 aa30.57■■■□□ 2.48
SDF4-202ENST00000360001 RTL1A6NKG5 1358 aa30.57■■■□□ 2.48
SDF4-202ENST00000360001 GCP02774 474 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms