RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 UQCRHP07919 91 aa19.14■□□□□ 0.65
COL18A1-203ENST00000359759 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
COL18A1-203ENST00000359759 KIAA0754O94854 1291 aa19.14■□□□□ 0.65
COL18A1-203ENST00000359759 SEPT7Q16181 437 aaKnown RBP19.14■□□□□ 0.65
COL18A1-203ENST00000359759 CCP110O43303 1012 aa19.14■□□□□ 0.65
COL18A1-203ENST00000359759 GOLGA6L10A6NI86 522 aa19.13■□□□□ 0.65
COL18A1-203ENST00000359759 TAX1BP1Q86VP1 789 aa19.13■□□□□ 0.65
COL18A1-203ENST00000359759 GNAI1P63096 354 aa19.13■□□□□ 0.65
COL18A1-203ENST00000359759 CCDC181Q5TID7 509 aa19.12■□□□□ 0.65
COL18A1-203ENST00000359759 UACAQ9BZF9 1416 aa19.12■□□□□ 0.65
COL18A1-203ENST00000359759 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
COL18A1-203ENST00000359759 OSCARQ8IYS5 282 aa19.12■□□□□ 0.65
COL18A1-203ENST00000359759 STK38Q15208 465 aa19.11■□□□□ 0.65
COL18A1-203ENST00000359759 CCDC18Q5T9S5 1454 aa19.11■□□□□ 0.65
COL18A1-203ENST00000359759 ERLIN2O94905 339 aa19.11■□□□□ 0.65
COL18A1-203ENST00000359759 CCAR1Q8IX12 1150 aaKnown RBP19.1■□□□□ 0.65
COL18A1-203ENST00000359759 DEF6Q9H4E7 631 aa19.1■□□□□ 0.65
COL18A1-203ENST00000359759 ZHX3Q9H4I2 956 aa19.1■□□□□ 0.65
COL18A1-203ENST00000359759 TANGO6Q9C0B7 1094 aa19.1■□□□□ 0.65
COL18A1-203ENST00000359759 SURF6O75683 361 aaKnown RBP19.09■□□□□ 0.65
COL18A1-203ENST00000359759 MBD3O95983 291 aa19.09■□□□□ 0.65
COL18A1-203ENST00000359759 ZNF396Q96N95 335 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-203ENST00000359759 PDZRN3Q9UPQ7 1066 aa19.09■□□□□ 0.65
COL18A1-203ENST00000359759 SART3Q15020 963 aaKnown RBP19.09■□□□□ 0.65
COL18A1-203ENST00000359759 ZRSR2Q15696 482 aaKnown RBP19.09■□□□□ 0.65
COL18A1-203ENST00000359759 VGFO15240 615 aaPredicted RBP19.09■□□□□ 0.65
COL18A1-203ENST00000359759 TNMDQ9H2S6 317 aa19.09■□□□□ 0.65
COL18A1-203ENST00000359759 TXLNAP40222 546 aa19.08■□□□□ 0.65
COL18A1-203ENST00000359759 PPFIBP1Q86W92 1011 aa19.08■□□□□ 0.65
COL18A1-203ENST00000359759 ZNHIT6Q9NWK9 470 aaKnown RBP19.08■□□□□ 0.64
COL18A1-203ENST00000359759 GGNBP2Q9H3C7 697 aa19.08■□□□□ 0.64
COL18A1-203ENST00000359759 CCDC112Q8NEF3 446 aa19.07■□□□□ 0.64
COL18A1-203ENST00000359759 ATP2B2Q01814 1243 aa19.06■□□□□ 0.64
COL18A1-203ENST00000359759 CDCA7LQ96GN5 454 aa19.06■□□□□ 0.64
COL18A1-203ENST00000359759 SEPT11Q9NVA2 429 aaKnown RBP19.06■□□□□ 0.64
COL18A1-203ENST00000359759 TBC1D2BQ9UPU7 963 aa19.06■□□□□ 0.64
COL18A1-203ENST00000359759 HMGN5P82970 282 aaKnown RBP19.06■□□□□ 0.64
COL18A1-203ENST00000359759 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
COL18A1-203ENST00000359759 PDCL3Q9H2J4 239 aa19.05■□□□□ 0.64
COL18A1-203ENST00000359759 IBSPP21815 317 aaPredicted RBP19.05■□□□□ 0.64
COL18A1-203ENST00000359759 TTC39AQ5SRH9 613 aa19.05■□□□□ 0.64
COL18A1-203ENST00000359759 CCDC192P0DO97 292 aa19.05■□□□□ 0.64
COL18A1-203ENST00000359759 ME1P48163 572 aa19.04■□□□□ 0.64
COL18A1-203ENST00000359759 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
COL18A1-203ENST00000359759 GRPEL1Q9HAV7 217 aa19.04■□□□□ 0.64
COL18A1-203ENST00000359759 WWC2Q6AWC2 1192 aa19.04■□□□□ 0.64
COL18A1-203ENST00000359759 KIF7Q2M1P5 1343 aa19.04■□□□□ 0.64
COL18A1-203ENST00000359759 CABP2Q9NPB3 220 aa19.03■□□□□ 0.64
COL18A1-203ENST00000359759 RAPGEF4Q8WZA2 1011 aa19.03■□□□□ 0.64
COL18A1-203ENST00000359759 CCDC102AQ96A19 550 aa19.03■□□□□ 0.64
COL18A1-203ENST00000359759 LRRFIP2Q9Y608 721 aaKnown RBP19.03■□□□□ 0.64
COL18A1-203ENST00000359759 PRDM10Q9NQV6 1147 aa19.02■□□□□ 0.64
COL18A1-203ENST00000359759 ADAMTS8Q9UP79 889 aa19.02■□□□□ 0.64
COL18A1-203ENST00000359759 SMARCA2P51531 1590 aa19.02■□□□□ 0.64
COL18A1-203ENST00000359759 GOLGA6L7A0A1B0GV03 622 aa19.02■□□□□ 0.63
COL18A1-203ENST00000359759 RABEP1Q15276 862 aa19.01■□□□□ 0.63
COL18A1-203ENST00000359759 SIL1Q9H173 461 aa19.01■□□□□ 0.63
COL18A1-203ENST00000359759 NOB1Q9ULX3 412 aaKnown RBP19.01■□□□□ 0.63
COL18A1-203ENST00000359759 TAF3Q5VWG9 929 aa19.01■□□□□ 0.63
COL18A1-203ENST00000359759 NLRP2Q9NX02 1062 aa19■□□□□ 0.63
COL18A1-203ENST00000359759 EIF3JO75822 258 aaKnown RBP19■□□□□ 0.63
COL18A1-203ENST00000359759 ANKRD18AQ8IVF6 992 aa19■□□□□ 0.63
COL18A1-203ENST00000359759 PODXL2Q9NZ53 605 aa19■□□□□ 0.63
COL18A1-203ENST00000359759 RSPH4AQ5TD94 716 aa19■□□□□ 0.63
COL18A1-203ENST00000359759 PDCP20941 246 aa18.99■□□□□ 0.63
COL18A1-203ENST00000359759 NUP133Q8WUM0 1156 aa18.99■□□□□ 0.63
COL18A1-203ENST00000359759 LRRCC1Q9C099 1032 aa18.99■□□□□ 0.63
COL18A1-203ENST00000359759 ERLIN1O75477 346 aa18.99■□□□□ 0.63
COL18A1-203ENST00000359759 CYP46A1Q9Y6A2 500 aa18.98■□□□□ 0.63
COL18A1-203ENST00000359759 SLC3A2P08195 630 aaKnown RBP18.98■□□□□ 0.63
COL18A1-203ENST00000359759 PIP4K2AP48426 406 aaPredicted RBP18.98■□□□□ 0.63
COL18A1-203ENST00000359759 CCDC30Q5VVM6 783 aa18.98■□□□□ 0.63
COL18A1-203ENST00000359759 EXOSC9Q06265 439 aaKnown RBP18.98■□□□□ 0.63
COL18A1-203ENST00000359759 CNNM1Q9NRU3 951 aa18.97■□□□□ 0.63
COL18A1-203ENST00000359759 CCDC69A6NI79 296 aa18.97■□□□□ 0.63
COL18A1-203ENST00000359759 MCM2P49736 904 aa18.97■□□□□ 0.63
COL18A1-203ENST00000359759 DACH1Q9UI36 760 aa18.97■□□□□ 0.63
COL18A1-203ENST00000359759 PIBF1Q8WXW3 757 aa18.97■□□□□ 0.63
COL18A1-203ENST00000359759 CCDC7Q96M83 1385 aa18.97■□□□□ 0.63
COL18A1-203ENST00000359759 K7ELQ4 463 aaPredicted RBP18.97■□□□□ 0.63
COL18A1-203ENST00000359759 HIP1O00291 1037 aa18.96■□□□□ 0.63
COL18A1-203ENST00000359759 STIM1Q13586 685 aa18.96■□□□□ 0.63
COL18A1-203ENST00000359759 KIF6Q6ZMV9 814 aa18.96■□□□□ 0.63
COL18A1-203ENST00000359759 BCAR3O75815 825 aa18.95■□□□□ 0.62
COL18A1-203ENST00000359759 GBP2P32456 591 aaPredicted RBP18.95■□□□□ 0.62
COL18A1-203ENST00000359759 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
COL18A1-203ENST00000359759 FILIP1Q7Z7B0 1213 aa18.95■□□□□ 0.62
COL18A1-203ENST00000359759 TSR2Q969E8 191 aaKnown RBP18.95■□□□□ 0.62
COL18A1-203ENST00000359759 RBM42Q9BTD8 480 aaKnown RBP18.95■□□□□ 0.62
COL18A1-203ENST00000359759 LARP1BQ659C4 914 aaKnown RBP18.95■□□□□ 0.62
COL18A1-203ENST00000359759 CNTLNQ9NXG0 1405 aa18.95■□□□□ 0.62
COL18A1-203ENST00000359759 GNAI3P08754 354 aa18.95■□□□□ 0.62
COL18A1-203ENST00000359759 AEBP1Q8IUX7 1158 aa18.95■□□□□ 0.62
COL18A1-203ENST00000359759 CBFA2T2O43439 604 aa18.94■□□□□ 0.62
COL18A1-203ENST00000359759 CAMK4Q16566 473 aa18.94■□□□□ 0.62
COL18A1-203ENST00000359759 SSBP05455 408 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL18A1-203ENST00000359759 MTHFSP49914 203 aa18.94■□□□□ 0.62
COL18A1-203ENST00000359759 CBX1P83916 185 aa18.94■□□□□ 0.62
COL18A1-203ENST00000359759 CCDC158Q5M9N0 1113 aa18.94■□□□□ 0.62
COL18A1-203ENST00000359759 GNAI2P04899 355 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms