RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
CCL20-201ENST00000358813 TRAIPQ9BWF2 469 aa9.29□□□□□ -0.92
CCL20-201ENST00000358813 JUNDP17535 347 aa9.28□□□□□ -0.92
CCL20-201ENST00000358813 MMP16P51512 607 aa9.27□□□□□ -0.93
CCL20-201ENST00000358813 RTL5Q5HYW3 569 aaPredicted RBP9.27□□□□□ -0.93
CCL20-201ENST00000358813 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
CCL20-201ENST00000358813 TSC1Q92574 1164 aa9.27□□□□□ -0.93
CCL20-201ENST00000358813 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.27□□□□□ -0.93
CCL20-201ENST00000358813 CFAP99D6REC4 459 aa9.26□□□□□ -0.93
CCL20-201ENST00000358813 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
CCL20-201ENST00000358813 FCF1Q9Y324 198 aaKnown RBP9.26□□□□□ -0.93
CCL20-201ENST00000358813 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
CCL20-201ENST00000358813 KIF21AQ7Z4S6 1674 aa9.24□□□□□ -0.93
CCL20-201ENST00000358813 MRC2Q9UBG0 1479 aa9.24□□□□□ -0.93
CCL20-201ENST00000358813 DESI1Q6ICB0 168 aa9.24□□□□□ -0.93
CCL20-201ENST00000358813 CCDC24Q8N4L8 307 aa9.24□□□□□ -0.93
CCL20-201ENST00000358813 HELBQ8NG08 1087 aaPredicted RBP9.23□□□□□ -0.93
CCL20-201ENST00000358813 RGS20O76081 388 aa9.22□□□□□ -0.93
CCL20-201ENST00000358813 FBXO31Q5XUX0 539 aaPredicted RBP9.22□□□□□ -0.93
CCL20-201ENST00000358813 PPP2R2DQ66LE6 453 aa9.22□□□□□ -0.93
CCL20-201ENST00000358813 POM121Q96HA1 1249 aa9.22□□□□□ -0.93
CCL20-201ENST00000358813 NUDT12Q9BQG2 462 aa9.22□□□□□ -0.93
CCL20-201ENST00000358813 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.94
CCL20-201ENST00000358813 PRKD2Q9BZL6 878 aa9.21□□□□□ -0.94
CCL20-201ENST00000358813 PTPRNQ16849 979 aa9.2□□□□□ -0.94
CCL20-201ENST00000358813 LYPD8Q6UX82 237 aa9.2□□□□□ -0.94
CCL20-201ENST00000358813 BANK1Q8NDB2 785 aa9.2□□□□□ -0.94
CCL20-201ENST00000358813 CADPSQ9ULU8 1353 aa9.2□□□□□ -0.94
CCL20-201ENST00000358813 CEP164Q9UPV0 1460 aa9.2□□□□□ -0.94
CCL20-201ENST00000358813 ZBTB24O43167 697 aaPredicted RBP9.19□□□□□ -0.94
CCL20-201ENST00000358813 AP1G2O75843 785 aa9.19□□□□□ -0.94
CCL20-201ENST00000358813 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
CCL20-201ENST00000358813 RFC5P40937 340 aa9.19□□□□□ -0.94
CCL20-201ENST00000358813 SLC19A1P41440 591 aa9.19□□□□□ -0.94
CCL20-201ENST00000358813 COG6Q9Y2V7 657 aa9.18□□□□□ -0.94
CCL20-201ENST00000358813 PEG3Q9GZU2 1588 aa9.17□□□□□ -0.94
CCL20-201ENST00000358813 WDR62O43379 1518 aa9.17□□□□□ -0.94
CCL20-201ENST00000358813 CTDSPL2Q05D32 466 aa9.17□□□□□ -0.94
CCL20-201ENST00000358813 LIAT1Q6ZQX7 453 aa9.17□□□□□ -0.94
CCL20-201ENST00000358813 AEBP1Q8IUX7 1158 aa9.17□□□□□ -0.94
CCL20-201ENST00000358813 ZNF330Q9Y3S2 320 aaPredicted RBP9.17□□□□□ -0.94
CCL20-201ENST00000358813 V9GY48 417 aaPredicted RBP9.17□□□□□ -0.94
CCL20-201ENST00000358813 PER1O15534 1290 aaPredicted RBP9.16□□□□□ -0.94
CCL20-201ENST00000358813 CTHP32929 405 aa9.16□□□□□ -0.94
CCL20-201ENST00000358813 EMID1Q96A84 441 aaPredicted RBP9.16□□□□□ -0.94
CCL20-201ENST00000358813 EVA1BQ9NVM1 165 aa9.16□□□□□ -0.94
CCL20-201ENST00000358813 RPIAP49247 311 aa9.15□□□□□ -0.94
CCL20-201ENST00000358813 KCNH2Q12809 1159 aa9.15□□□□□ -0.94
CCL20-201ENST00000358813 TMEM259Q4ZIN3 620 aa9.15□□□□□ -0.94
CCL20-201ENST00000358813 WWC1Q8IX03 1113 aa9.15□□□□□ -0.94
CCL20-201ENST00000358813 CD2BP2O95400 341 aaKnown RBP9.14□□□□□ -0.95
CCL20-201ENST00000358813 PDE4CQ08493 712 aa9.14□□□□□ -0.95
CCL20-201ENST00000358813 PTCRAQ6ISU1 281 aaPredicted RBP9.14□□□□□ -0.95
CCL20-201ENST00000358813 PPP1R15AO75807 674 aaPredicted RBP9.13□□□□□ -0.95
CCL20-201ENST00000358813 SPRYD7Q5W111 196 aa9.13□□□□□ -0.95
CCL20-201ENST00000358813 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
CCL20-201ENST00000358813 MROH2BQ7Z745 1585 aa9.12□□□□□ -0.95
CCL20-201ENST00000358813 F12P00748 615 aaPredicted RBP9.12□□□□□ -0.95
CCL20-201ENST00000358813 USP17L8P0C7I0 530 aa9.12□□□□□ -0.95
CCL20-201ENST00000358813 RETREG2Q8NC44 543 aa9.12□□□□□ -0.95
CCL20-201ENST00000358813 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
CCL20-201ENST00000358813 UNC93B1Q9H1C4 597 aa9.12□□□□□ -0.95
CCL20-201ENST00000358813 FANCD2Q9BXW9 1451 aa9.12□□□□□ -0.95
CCL20-201ENST00000358813 ACIN1Q9UKV3 1341 aaKnown RBP9.11□□□□□ -0.95
CCL20-201ENST00000358813 TRIM32Q13049 653 aa9.11□□□□□ -0.95
CCL20-201ENST00000358813 ZNF598Q86UK7 904 aaKnown RBP9.11□□□□□ -0.95
CCL20-201ENST00000358813 PRM3Q9NNZ6 103 aa9.11□□□□□ -0.95
CCL20-201ENST00000358813 SNRKQ9NRH2 765 aa9.11□□□□□ -0.95
CCL20-201ENST00000358813 ZNF697Q5TEC3 545 aa9.1□□□□□ -0.95
CCL20-201ENST00000358813 TMCO4Q5TGY1 634 aa9.1□□□□□ -0.95
CCL20-201ENST00000358813 NR6A1Q15406 480 aa9.07□□□□□ -0.96
CCL20-201ENST00000358813 BAP1Q92560 729 aa9.07□□□□□ -0.96
CCL20-201ENST00000358813 PATL2C9JE40 543 aaKnown RBP9.06□□□□□ -0.96
CCL20-201ENST00000358813 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
CCL20-201ENST00000358813 ARMC2Q8NEN0 867 aa9.06□□□□□ -0.96
CCL20-201ENST00000358813 CALR3Q96L12 384 aaKnown RBP9.06□□□□□ -0.96
CCL20-201ENST00000358813 GZF1Q9H116 711 aaPredicted RBP9.06□□□□□ -0.96
CCL20-201ENST00000358813 HMX1Q9NP08 348 aaPredicted RBP9.06□□□□□ -0.96
CCL20-201ENST00000358813 SOCS7O14512 581 aa9.05□□□□□ -0.96
CCL20-201ENST00000358813 WNT7BP56706 349 aa9.05□□□□□ -0.96
CCL20-201ENST00000358813 FOXC1Q12948 553 aa9.05□□□□□ -0.96
CCL20-201ENST00000358813 GDPD2Q9HCC8 539 aa9.05□□□□□ -0.96
CCL20-201ENST00000358813 ZNF511Q8NB15 262 aa9.04□□□□□ -0.96
CCL20-201ENST00000358813 EPS8L1Q8TE68 723 aa9.04□□□□□ -0.96
CCL20-201ENST00000358813 RIMBP3CA6NJZ7 1639 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 RIMBP3BA6NNM3 1639 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 RIMBP3Q9UFD9 1639 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 SH3BP2P78314 561 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 SKOR1P84550 965 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 IRF5Q13568 498 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 CYB5RLQ6IPT4 315 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 PNMA1Q8ND90 353 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 RGS22Q8NE09 1264 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 PDZRN3Q9UPQ7 1066 aa9.03□□□□□ -0.96
CCL20-201ENST00000358813 TNFRSF10AO00220 468 aa9.02□□□□□ -0.97
CCL20-201ENST00000358813 MFAP1P55081 439 aaKnown RBP9.02□□□□□ -0.97
CCL20-201ENST00000358813 RC3H1Q5TC82 1133 aaKnown RBP9.02□□□□□ -0.97
CCL20-201ENST00000358813 NBPF14Q5TI25 921 aa9.02□□□□□ -0.97
CCL20-201ENST00000358813 MTMR14Q8NCE2 650 aa9.02□□□□□ -0.97
CCL20-201ENST00000358813 FKBPLQ9UIM3 349 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms