RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 RGS12O14924 1447 aa29.22■■■□□ 2.27
PPP1CA-202ENST00000358239 PPIP5K1Q6PFW1 1433 aa29.22■■■□□ 2.27
PPP1CA-202ENST00000358239 CABLES1Q8TDN4 633 aa29.22■■■□□ 2.27
PPP1CA-202ENST00000358239 PHRF1Q9P1Y6 1649 aaKnown RBP29.22■■■□□ 2.27
PPP1CA-202ENST00000358239 COL14A1Q05707 1796 aaKnown RBP29.21■■■□□ 2.27
PPP1CA-202ENST00000358239 ACEP12821 1306 aa29.2■■■□□ 2.27
PPP1CA-202ENST00000358239 EVC2Q86UK5 1308 aa29.2■■■□□ 2.27
PPP1CA-202ENST00000358239 PAK3O75914 559 aaPredicted RBP29.2■■■□□ 2.26
PPP1CA-202ENST00000358239 CABP2Q9NPB3 220 aa29.18■■■□□ 2.26
PPP1CA-202ENST00000358239 NRAPQ86VF7 1730 aa29.17■■■□□ 2.26
PPP1CA-202ENST00000358239 SBNO2Q9Y2G9 1366 aa29.17■■■□□ 2.26
PPP1CA-202ENST00000358239 AKAP12Q02952 1782 aa29.17■■■□□ 2.26
PPP1CA-202ENST00000358239 UNC5CLQ8IV45 518 aa29.17■■■□□ 2.26
PPP1CA-202ENST00000358239 CARD11Q9BXL7 1154 aa29.16■■■□□ 2.26
PPP1CA-202ENST00000358239 BRD4O60885 1362 aaPredicted RBP29.15■■■□□ 2.26
PPP1CA-202ENST00000358239 PLEKHG5O94827 1062 aa29.14■■■□□ 2.26
PPP1CA-202ENST00000358239 GLI3P10071 1580 aa29.13■■■□□ 2.25
PPP1CA-202ENST00000358239 GJD4Q96KN9 370 aaPredicted RBP29.12■■■□□ 2.25
PPP1CA-202ENST00000358239 CLSPNQ9HAW4 1339 aa29.09■■■□□ 2.25
PPP1CA-202ENST00000358239 NRKQ7Z2Y5 1582 aa29.08■■■□□ 2.25
PPP1CA-202ENST00000358239 BRWD3Q6RI45 1802 aa29.08■■■□□ 2.25
PPP1CA-202ENST00000358239 FAM83GA6ND36 823 aa29.07■■■□□ 2.24
PPP1CA-202ENST00000358239 USP6P35125 1406 aa29.07■■■□□ 2.24
PPP1CA-202ENST00000358239 ATAD2Q6PL18 1390 aa29.07■■■□□ 2.24
PPP1CA-202ENST00000358239 CABP1Q9NZU7 370 aa29.07■■■□□ 2.24
PPP1CA-202ENST00000358239 MON2Q7Z3U7 1717 aa29.06■■■□□ 2.24
PPP1CA-202ENST00000358239 VPS72Q15906 364 aa29.05■■■□□ 2.24
PPP1CA-202ENST00000358239 ABTB2Q8N961 1025 aa29.05■■■□□ 2.24
PPP1CA-202ENST00000358239 UPF1Q92900 1129 aaKnown RBP eCLIP29.04■■■□□ 2.24
PPP1CA-202ENST00000358239 PIK3C2AO00443 1686 aa29.02■■■□□ 2.24
PPP1CA-202ENST00000358239 PRDM11Q9NQV5 511 aa29.01■■■□□ 2.23
PPP1CA-202ENST00000358239 BTG4Q9NY30 223 aa29.01■■■□□ 2.23
PPP1CA-202ENST00000358239 TIMELESSQ9UNS1 1208 aa29.01■■■□□ 2.23
PPP1CA-202ENST00000358239 EP400Q96L91 3159 aa29.01■■■□□ 2.23
PPP1CA-202ENST00000358239 NLRP13Q86W25 1043 aa29■■■□□ 2.23
PPP1CA-202ENST00000358239 ZNF692Q9BU19 519 aaPredicted RBP29■■■□□ 2.23
PPP1CA-202ENST00000358239 PCGF6Q9BYE7 350 aa29■■■□□ 2.23
PPP1CA-202ENST00000358239 USP19O94966 1318 aa28.99■■■□□ 2.23
PPP1CA-202ENST00000358239 NUTM2GQ5VZR2 741 aa28.99■■■□□ 2.23
PPP1CA-202ENST00000358239 SSH2Q76I76 1423 aa28.99■■■□□ 2.23
PPP1CA-202ENST00000358239 KIAA0232Q92628 1395 aa28.99■■■□□ 2.23
PPP1CA-202ENST00000358239 CCDC9Q9Y3X0 531 aaKnown RBP28.97■■■□□ 2.23
PPP1CA-202ENST00000358239 CPSF1Q10570 1443 aaKnown RBP28.96■■■□□ 2.23
PPP1CA-202ENST00000358239 SLC24A1O60721 1099 aa28.96■■■□□ 2.23
PPP1CA-202ENST00000358239 LMO7Q8WWI1 1683 aa28.96■■■□□ 2.23
PPP1CA-202ENST00000358239 CPDO75976 1380 aa28.95■■■□□ 2.22
PPP1CA-202ENST00000358239 SLIT3O75094 1523 aa28.94■■■□□ 2.22
PPP1CA-202ENST00000358239 ONECUT3O60422 494 aaPredicted RBP28.93■■■□□ 2.22
PPP1CA-202ENST00000358239 PUS7Q96PZ0 661 aaKnown RBP28.93■■■□□ 2.22
PPP1CA-202ENST00000358239 USP54Q70EL1 1684 aa28.92■■■□□ 2.22
PPP1CA-202ENST00000358239 ZC3H6P61129 1189 aaKnown RBP28.91■■■□□ 2.22
PPP1CA-202ENST00000358239 TTC21AQ8NDW8 1320 aa28.91■■■□□ 2.22
PPP1CA-202ENST00000358239 KTN1Q86UP2 1357 aaKnown RBP28.9■■■□□ 2.22
PPP1CA-202ENST00000358239 GCP02774 474 aa28.89■■■□□ 2.22
PPP1CA-202ENST00000358239 NLRP6P59044 892 aa28.89■■■□□ 2.22
PPP1CA-202ENST00000358239 ST20-MTHFSA0A0A6YYL1 179 aa28.88■■■□□ 2.21
PPP1CA-202ENST00000358239 CHRNA2Q15822 529 aa28.88■■■□□ 2.21
PPP1CA-202ENST00000358239 THSD7AQ9UPZ6 1657 aa28.88■■■□□ 2.21
PPP1CA-202ENST00000358239 SPATA31A5Q5VU36 1347 aa28.88■■■□□ 2.21
PPP1CA-202ENST00000358239 TTC21BQ7Z4L5 1316 aa28.88■■■□□ 2.21
PPP1CA-202ENST00000358239 SPATA31A7Q8IWB4 1347 aa28.88■■■□□ 2.21
PPP1CA-202ENST00000358239 SEPT12Q8IYM1 358 aa28.87■■■□□ 2.21
PPP1CA-202ENST00000358239 TESK2Q96S53 571 aa28.87■■■□□ 2.21
PPP1CA-202ENST00000358239 CAMTA1Q9Y6Y1 1673 aa28.86■■■□□ 2.21
PPP1CA-202ENST00000358239 CD163L1Q9NR16 1453 aa28.86■■■□□ 2.21
PPP1CA-202ENST00000358239 USP47Q96K76 1375 aa28.86■■■□□ 2.21
PPP1CA-202ENST00000358239 NINLQ9Y2I6 1382 aa28.86■■■□□ 2.21
PPP1CA-202ENST00000358239 COL18A1P39060 1754 aa28.85■■■□□ 2.21
PPP1CA-202ENST00000358239 RGPD5Q99666 1765 aa28.83■■■□□ 2.21
PPP1CA-202ENST00000358239 CCDC125Q86Z20 511 aa28.83■■■□□ 2.21
PPP1CA-202ENST00000358239 TMC1Q8TDI8 760 aa28.83■■■□□ 2.21
PPP1CA-202ENST00000358239 HDGFL2Q7Z4V5 671 aaPredicted RBP28.82■■■□□ 2.2
PPP1CA-202ENST00000358239 SPATA31A1Q5TZJ5 1347 aa28.81■■■□□ 2.2
PPP1CA-202ENST00000358239 FAM98CQ17RN3 349 aaKnown RBP28.81■■■□□ 2.2
PPP1CA-202ENST00000358239 TERF2IPQ9NYB0 399 aa28.81■■■□□ 2.2
PPP1CA-202ENST00000358239 EVA1CP58658 441 aa28.8■■■□□ 2.2
PPP1CA-202ENST00000358239 KCNH5Q8NCM2 988 aa28.8■■■□□ 2.2
PPP1CA-202ENST00000358239 STRN4Q9NRL3 753 aa28.8■■■□□ 2.2
PPP1CA-202ENST00000358239 LTN1O94822 1766 aa28.8■■■□□ 2.2
PPP1CA-202ENST00000358239 EDC4Q6P2E9 1401 aaKnown RBP28.79■■■□□ 2.2
PPP1CA-202ENST00000358239 A0A0G2JS52 829 aa28.79■■■□□ 2.2
PPP1CA-202ENST00000358239 MYT1Q01538 1121 aa28.79■■■□□ 2.2
PPP1CA-202ENST00000358239 KRT27Q7Z3Y8 459 aa28.79■■■□□ 2.2
PPP1CA-202ENST00000358239 CCER1Q8TC90 406 aaPredicted RBP28.79■■■□□ 2.2
PPP1CA-202ENST00000358239 COL5A2P05997 1499 aaPredicted RBP28.78■■■□□ 2.2
PPP1CA-202ENST00000358239 AATKQ6ZMQ8 1374 aa28.78■■■□□ 2.2
PPP1CA-202ENST00000358239 SLC12A5Q9H2X9 1139 aa28.78■■■□□ 2.2
PPP1CA-202ENST00000358239 NFAT5O94916 1531 aa28.77■■■□□ 2.2
PPP1CA-202ENST00000358239 ABCC6O95255 1503 aa28.77■■■□□ 2.2
PPP1CA-202ENST00000358239 A0A1W2PP64 1363 aa28.76■■■□□ 2.2
PPP1CA-202ENST00000358239 USP31Q70CQ4 1352 aa28.76■■■□□ 2.2
PPP1CA-202ENST00000358239 TMF1P82094 1093 aa28.76■■■□□ 2.19
PPP1CA-202ENST00000358239 WNK3Q9BYP7 1800 aa28.76■■■□□ 2.19
PPP1CA-202ENST00000358239 BLMP54132 1417 aaPredicted RBP28.75■■■□□ 2.19
PPP1CA-202ENST00000358239 RGPD1P0DJD0 1748 aa28.74■■■□□ 2.19
PPP1CA-202ENST00000358239 PARP4Q9UKK3 1724 aaKnown RBP28.74■■■□□ 2.19
PPP1CA-202ENST00000358239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.72■■■□□ 2.19
PPP1CA-202ENST00000358239 CRB1P82279 1406 aa28.71■■■□□ 2.19
PPP1CA-202ENST00000358239 CDCA8Q53HL2 280 aa28.71■■■□□ 2.19
PPP1CA-202ENST00000358239 BARGINQ6ZT62 677 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms