RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 MAP3K1Q13233 1512 aa12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 TWISTNBQ3B726 338 aaPredicted RBP12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 CWC22Q9HCG8 908 aaKnown RBP12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 PRDM11Q9NQV5 511 aa12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 TPM1P09493 284 aa12.54□□□□□ -0.4
SPTAN1-201ENST00000358161 NUTM2BA6NNL0 878 aaPredicted RBP12.53□□□□□ -0.4
SPTAN1-201ENST00000358161 NUTM2EB1AL46 878 aaPredicted RBP12.53□□□□□ -0.4
SPTAN1-201ENST00000358161 NUTM2AQ8IVF1 878 aaPredicted RBP12.53□□□□□ -0.4
SPTAN1-201ENST00000358161 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
SPTAN1-201ENST00000358161 CT47B1P0C2W7 299 aaPredicted RBP12.53□□□□□ -0.4
SPTAN1-201ENST00000358161 SAFBQ15424 915 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPTAN1-201ENST00000358161 KCNH5Q8NCM2 988 aa12.53□□□□□ -0.4
SPTAN1-201ENST00000358161 LNPKQ9C0E8 428 aa12.53□□□□□ -0.4
SPTAN1-201ENST00000358161 HIP1O00291 1037 aa12.52□□□□□ -0.4
SPTAN1-201ENST00000358161 ANO8Q9HCE9 1232 aaPredicted RBP12.52□□□□□ -0.4
SPTAN1-201ENST00000358161 PANK1Q8TE04 598 aa12.52□□□□□ -0.4
SPTAN1-201ENST00000358161 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
SPTAN1-201ENST00000358161 BECN2A8MW95 431 aa12.52□□□□□ -0.41
SPTAN1-201ENST00000358161 HDGFL1Q5TGJ6 251 aa12.52□□□□□ -0.41
SPTAN1-201ENST00000358161 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
SPTAN1-201ENST00000358161 PSMA5P28066 241 aa12.52□□□□□ -0.41
SPTAN1-201ENST00000358161 AKNAQ7Z591 1439 aa12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 DENND4BO75064 1496 aaPredicted RBP12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 GNAI2P04899 355 aa12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 GNL3LQ9NVN8 582 aaKnown RBP12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 CDC45O75419 566 aa12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 CCT4P50991 539 aaKnown RBP12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 NAIPQ13075 1403 aa12.51□□□□□ -0.41
SPTAN1-201ENST00000358161 WDR63Q8IWG1 891 aa12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 NUDT16Q96DE0 195 aaKnown RBP12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 SMC3Q9UQE7 1217 aa12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 ANKRD20A12PQ8NF67 263 aa12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 BRMS1Q9HCU9 246 aa12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 FANCAO15360 1455 aa12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 SURF6O75683 361 aaKnown RBP12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 SLC3A2P08195 630 aaKnown RBP12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 XBP1P17861 261 aa12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 NBPF8Q3BBV2 869 aa12.5□□□□□ -0.41
SPTAN1-201ENST00000358161 SART3Q15020 963 aaKnown RBP12.49□□□□□ -0.41
SPTAN1-201ENST00000358161 FSD1Q9BTV5 496 aa12.49□□□□□ -0.41
SPTAN1-201ENST00000358161 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
SPTAN1-201ENST00000358161 PIP4K2BP78356 416 aa12.49□□□□□ -0.41
SPTAN1-201ENST00000358161 CNNM1Q9NRU3 951 aa12.49□□□□□ -0.41
SPTAN1-201ENST00000358161 FYB1O15117 783 aa12.49□□□□□ -0.41
SPTAN1-201ENST00000358161 FAM177BA6PVY3 158 aa12.48□□□□□ -0.41
SPTAN1-201ENST00000358161 SLC4A2P04920 1241 aa12.48□□□□□ -0.41
SPTAN1-201ENST00000358161 CCDC158Q5M9N0 1113 aa12.48□□□□□ -0.41
SPTAN1-201ENST00000358161 ABCC5O15440 1437 aa12.48□□□□□ -0.41
SPTAN1-201ENST00000358161 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
SPTAN1-201ENST00000358161 FOXD4L6Q3SYB3 417 aaPredicted RBP12.48□□□□□ -0.41
SPTAN1-201ENST00000358161 FOXD4L3Q6VB84 417 aaPredicted RBP12.48□□□□□ -0.41
SPTAN1-201ENST00000358161 NSD3Q9BZ95 1437 aa12.48□□□□□ -0.41
SPTAN1-201ENST00000358161 GCC1Q96CN9 775 aa12.47□□□□□ -0.41
SPTAN1-201ENST00000358161 FCHSD2O94868 740 aa12.47□□□□□ -0.41
SPTAN1-201ENST00000358161 NUCB2P80303 420 aa12.47□□□□□ -0.41
SPTAN1-201ENST00000358161 PDE3AQ14432 1141 aa12.47□□□□□ -0.41
SPTAN1-201ENST00000358161 RAPGEF6Q8TEU7 1601 aa12.47□□□□□ -0.41
SPTAN1-201ENST00000358161 BTBD11A6QL63 1104 aa12.47□□□□□ -0.41
SPTAN1-201ENST00000358161 TTC39AQ5SRH9 613 aa12.47□□□□□ -0.41
SPTAN1-201ENST00000358161 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.47□□□□□ -0.41
SPTAN1-201ENST00000358161 BICD2Q8TD16 824 aa12.46□□□□□ -0.41
SPTAN1-201ENST00000358161 CTTNBP2Q8WZ74 1663 aa12.46□□□□□ -0.41
SPTAN1-201ENST00000358161 NOB1Q9ULX3 412 aaKnown RBP12.46□□□□□ -0.41
SPTAN1-201ENST00000358161 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.41
SPTAN1-201ENST00000358161 ZNF608Q9ULD9 1512 aaPredicted RBP12.46□□□□□ -0.42
SPTAN1-201ENST00000358161 GOLGA6L1Q8N7Z2 621 aa12.46□□□□□ -0.42
SPTAN1-201ENST00000358161 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.46□□□□□ -0.42
SPTAN1-201ENST00000358161 A0A0U1RQG5 324 aaPredicted RBP12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 RRS1Q15050 365 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 CHMP5Q9NZZ3 219 aa12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 TEX14Q8IWB6 1497 aa12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 DNAJC2Q99543 621 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 SRCIN1Q9C0H9 1055 aa12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 LRPPRCP42704 1394 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 THOC2Q8NI27 1593 aaKnown RBP12.45□□□□□ -0.42
SPTAN1-201ENST00000358161 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
SPTAN1-201ENST00000358161 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
SPTAN1-201ENST00000358161 PRM3Q9NNZ6 103 aa12.44□□□□□ -0.42
SPTAN1-201ENST00000358161 DMRT2Q9Y5R5 561 aa12.44□□□□□ -0.42
SPTAN1-201ENST00000358161 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-201ENST00000358161 CCDC57Q2TAC2 916 aa12.44□□□□□ -0.42
SPTAN1-201ENST00000358161 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
SPTAN1-201ENST00000358161 IPO7O95373 1038 aaKnown RBP12.43□□□□□ -0.42
SPTAN1-201ENST00000358161 MYL6BP14649 208 aa12.43□□□□□ -0.42
SPTAN1-201ENST00000358161 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
SPTAN1-201ENST00000358161 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
SPTAN1-201ENST00000358161 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
SPTAN1-201ENST00000358161 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
SPTAN1-201ENST00000358161 STARD3NLO95772 234 aa12.43□□□□□ -0.42
SPTAN1-201ENST00000358161 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
SPTAN1-201ENST00000358161 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
SPTAN1-201ENST00000358161 CCDC73Q6ZRK6 1079 aa12.42□□□□□ -0.42
SPTAN1-201ENST00000358161 NFE2L2Q16236 605 aa12.42□□□□□ -0.42
SPTAN1-201ENST00000358161 CDCA7LQ96GN5 454 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms