RNA–Protein interactions for RNA: ENST00000357898.3

SPSB1-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPSB1, Length 1,439 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-202ENST00000357898 CABP2Q9NPB3 220 aa23.88■■□□□ 1.41
SPSB1-202ENST00000357898 ALS2Q96Q42 1657 aa23.88■■□□□ 1.41
SPSB1-202ENST00000357898 PLEKHG3A1L390 1219 aa23.87■■□□□ 1.41
SPSB1-202ENST00000357898 BTG4Q9NY30 223 aa23.87■■□□□ 1.41
SPSB1-202ENST00000357898 ROCK2O75116 1388 aaKnown RBP23.87■■□□□ 1.41
SPSB1-202ENST00000357898 NUTM2GQ5VZR2 741 aa23.86■■□□□ 1.41
SPSB1-202ENST00000357898 PLCH1Q4KWH8 1693 aa23.85■■□□□ 1.41
SPSB1-202ENST00000357898 NWD2Q9ULI1 1742 aa23.85■■□□□ 1.41
SPSB1-202ENST00000357898 PRDM11Q9NQV5 511 aa23.84■■□□□ 1.41
SPSB1-202ENST00000357898 POLR3AO14802 1390 aaPredicted RBP23.84■■□□□ 1.41
SPSB1-202ENST00000357898 A0A0G2JS52 829 aa23.84■■□□□ 1.41
SPSB1-202ENST00000357898 MYT1Q01538 1121 aa23.84■■□□□ 1.41
SPSB1-202ENST00000357898 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
SPSB1-202ENST00000357898 ABTB2Q8N961 1025 aa23.84■■□□□ 1.41
SPSB1-202ENST00000357898 PPIP5K1Q6PFW1 1433 aa23.83■■□□□ 1.41
SPSB1-202ENST00000357898 GLI3P10071 1580 aa23.83■■□□□ 1.41
SPSB1-202ENST00000357898 SEPT12Q8IYM1 358 aa23.83■■□□□ 1.4
SPSB1-202ENST00000357898 QRICH2Q9H0J4 1663 aa23.82■■□□□ 1.4
SPSB1-202ENST00000357898 EVC2Q86UK5 1308 aa23.82■■□□□ 1.4
SPSB1-202ENST00000357898 TRPM1Q7Z4N2 1603 aa23.81■■□□□ 1.4
SPSB1-202ENST00000357898 TOPAZ1Q8N9V7 1692 aa23.81■■□□□ 1.4
SPSB1-202ENST00000357898 CCDC125Q86Z20 511 aa23.8■■□□□ 1.4
SPSB1-202ENST00000357898 COL14A1Q05707 1796 aaKnown RBP23.8■■□□□ 1.4
SPSB1-202ENST00000357898 ZC3H6P61129 1189 aaKnown RBP23.79■■□□□ 1.4
SPSB1-202ENST00000357898 CABP1Q9NZU7 370 aa23.79■■□□□ 1.4
SPSB1-202ENST00000357898 TONSLQ96HA7 1378 aa23.79■■□□□ 1.4
SPSB1-202ENST00000357898 KIAA0232Q92628 1395 aa23.77■■□□□ 1.4
SPSB1-202ENST00000357898 ONECUT3O60422 494 aaPredicted RBP23.76■■□□□ 1.39
SPSB1-202ENST00000357898 CHRNA2Q15822 529 aa23.76■■□□□ 1.39
SPSB1-202ENST00000357898 FAM98CQ17RN3 349 aaKnown RBP23.76■■□□□ 1.39
SPSB1-202ENST00000357898 KRT27Q7Z3Y8 459 aa23.76■■□□□ 1.39
SPSB1-202ENST00000357898 NLRP13Q86W25 1043 aa23.76■■□□□ 1.39
SPSB1-202ENST00000357898 CARD11Q9BXL7 1154 aa23.75■■□□□ 1.39
SPSB1-202ENST00000357898 EVA1CP58658 441 aa23.74■■□□□ 1.39
SPSB1-202ENST00000357898 STRN4Q9NRL3 753 aa23.74■■□□□ 1.39
SPSB1-202ENST00000357898 CRYBG1Q9Y4K1 1723 aa23.74■■□□□ 1.39
SPSB1-202ENST00000357898 SF3B2Q13435 895 aaKnown RBP23.73■■□□□ 1.39
SPSB1-202ENST00000357898 NRAPQ86VF7 1730 aa23.72■■□□□ 1.39
SPSB1-202ENST00000357898 BRD4O60885 1362 aaPredicted RBP23.71■■□□□ 1.39
SPSB1-202ENST00000357898 SPATA31A5Q5VU36 1347 aa23.71■■□□□ 1.39
SPSB1-202ENST00000357898 SPATA31A7Q8IWB4 1347 aa23.71■■□□□ 1.39
SPSB1-202ENST00000357898 EP400Q96L91 3159 aa23.71■■□□□ 1.39
SPSB1-202ENST00000357898 BRWD3Q6RI45 1802 aa23.71■■□□□ 1.39
SPSB1-202ENST00000357898 PHRF1Q9P1Y6 1649 aaKnown RBP23.71■■□□□ 1.39
SPSB1-202ENST00000357898 NLRP6P59044 892 aa23.69■■□□□ 1.38
SPSB1-202ENST00000357898 GCP02774 474 aa23.68■■□□□ 1.38
SPSB1-202ENST00000357898 ZNF692Q9BU19 519 aaPredicted RBP23.68■■□□□ 1.38
SPSB1-202ENST00000357898 USP6P35125 1406 aa23.68■■□□□ 1.38
SPSB1-202ENST00000357898 ZBTB7CA1YPR0 619 aa23.67■■□□□ 1.38
SPSB1-202ENST00000357898 BLMP54132 1417 aaPredicted RBP23.67■■□□□ 1.38
SPSB1-202ENST00000357898 USP19O94966 1318 aa23.67■■□□□ 1.38
SPSB1-202ENST00000357898 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
SPSB1-202ENST00000357898 ZRANB1Q9UGI0 708 aa23.66■■□□□ 1.38
SPSB1-202ENST00000357898 SPATA31A1Q5TZJ5 1347 aa23.65■■□□□ 1.38
SPSB1-202ENST00000357898 NRKQ7Z2Y5 1582 aa23.63■■□□□ 1.37
SPSB1-202ENST00000357898 CPDO75976 1380 aa23.63■■□□□ 1.37
SPSB1-202ENST00000357898 LARP1Q6PKG0 1096 aaKnown RBP23.6■■□□□ 1.37
SPSB1-202ENST00000357898 DEFB132Q7Z7B7 95 aa23.6■■□□□ 1.37
SPSB1-202ENST00000357898 TMC1Q8TDI8 760 aa23.6■■□□□ 1.37
SPSB1-202ENST00000357898 SSH2Q76I76 1423 aa23.6■■□□□ 1.37
SPSB1-202ENST00000357898 TTC21BQ7Z4L5 1316 aa23.6■■□□□ 1.37
SPSB1-202ENST00000357898 FAM182BQ5T319 152 aa23.59■■□□□ 1.37
SPSB1-202ENST00000357898 KTN1Q86UP2 1357 aaKnown RBP23.59■■□□□ 1.37
SPSB1-202ENST00000357898 SBNO2Q9Y2G9 1366 aa23.59■■□□□ 1.37
SPSB1-202ENST00000357898 CAMTA1Q9Y6Y1 1673 aa23.58■■□□□ 1.37
SPSB1-202ENST00000357898 TTC21AQ8NDW8 1320 aa23.57■■□□□ 1.36
SPSB1-202ENST00000357898 SOX12O15370 315 aa23.57■■□□□ 1.36
SPSB1-202ENST00000357898 TCP11L2Q8N4U5 519 aa23.57■■□□□ 1.36
SPSB1-202ENST00000357898 BAG6P46379 1132 aa23.56■■□□□ 1.36
SPSB1-202ENST00000357898 PDE3BQ13370 1112 aa23.56■■□□□ 1.36
SPSB1-202ENST00000357898 BARGINQ6ZT62 677 aa23.56■■□□□ 1.36
SPSB1-202ENST00000357898 KCNH5Q8NCM2 988 aa23.56■■□□□ 1.36
SPSB1-202ENST00000357898 HDGFL2Q7Z4V5 671 aaPredicted RBP23.55■■□□□ 1.36
SPSB1-202ENST00000357898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.54■■□□□ 1.36
SPSB1-202ENST00000357898 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
SPSB1-202ENST00000357898 THRAP3Q9Y2W1 955 aaKnown RBP23.53■■□□□ 1.36
SPSB1-202ENST00000357898 PIK3C2AO00443 1686 aa23.53■■□□□ 1.36
SPSB1-202ENST00000357898 THSD7AQ9UPZ6 1657 aa23.53■■□□□ 1.36
SPSB1-202ENST00000357898 AKAP12Q02952 1782 aa23.53■■□□□ 1.36
SPSB1-202ENST00000357898 SLIT3O75094 1523 aa23.53■■□□□ 1.36
SPSB1-202ENST00000357898 LMO7Q8WWI1 1683 aa23.52■■□□□ 1.36
SPSB1-202ENST00000357898 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
SPSB1-202ENST00000357898 FAM196AQ6ZSG2 479 aa23.51■■□□□ 1.35
SPSB1-202ENST00000357898 COL5A2P05997 1499 aaPredicted RBP23.51■■□□□ 1.35
SPSB1-202ENST00000357898 ST20-MTHFSA0A0A6YYL1 179 aa23.5■■□□□ 1.35
SPSB1-202ENST00000357898 SLC24A1O60721 1099 aa23.5■■□□□ 1.35
SPSB1-202ENST00000357898 TOM1L2Q6ZVM7 507 aa23.5■■□□□ 1.35
SPSB1-202ENST00000357898 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
SPSB1-202ENST00000357898 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
SPSB1-202ENST00000357898 TERF2IPQ9NYB0 399 aa23.5■■□□□ 1.35
SPSB1-202ENST00000357898 CRB1P82279 1406 aa23.48■■□□□ 1.35
SPSB1-202ENST00000357898 CSB-PGBD3P0DP91 1061 aa23.48■■□□□ 1.35
SPSB1-202ENST00000357898 ARHGEF25Q86VW2 580 aa23.48■■□□□ 1.35
SPSB1-202ENST00000357898 PUS7Q96PZ0 661 aaKnown RBP23.48■■□□□ 1.35
SPSB1-202ENST00000357898 TRIM37O94972 964 aa23.47■■□□□ 1.35
SPSB1-202ENST00000357898 EN1Q05925 392 aaPredicted RBP23.47■■□□□ 1.35
SPSB1-202ENST00000357898 AXIN2Q9Y2T1 843 aa23.46■■□□□ 1.35
SPSB1-202ENST00000357898 NME9Q86XW9 330 aa23.45■■□□□ 1.34
SPSB1-202ENST00000357898 RGPD1P0DJD0 1748 aa23.44■■□□□ 1.34
SPSB1-202ENST00000357898 MON2Q7Z3U7 1717 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms