RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 ATAD2Q6PL18 1390 aa19.23■□□□□ 0.67
SHANK2-202ENST00000357171 SSH2Q76I76 1423 aa19.22■□□□□ 0.67
SHANK2-202ENST00000357171 PUS7Q96PZ0 661 aaKnown RBP19.22■□□□□ 0.67
SHANK2-202ENST00000357171 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
SHANK2-202ENST00000357171 SLIT2O94813 1529 aa19.22■□□□□ 0.67
SHANK2-202ENST00000357171 CABLES1Q8TDN4 633 aa19.21■□□□□ 0.67
SHANK2-202ENST00000357171 BCL9LQ86UU0 1499 aa19.21■□□□□ 0.67
SHANK2-202ENST00000357171 PHRF1Q9P1Y6 1649 aaKnown RBP19.21■□□□□ 0.67
SHANK2-202ENST00000357171 USP6P35125 1406 aa19.21■□□□□ 0.67
SHANK2-202ENST00000357171 NWD2Q9ULI1 1742 aa19.2■□□□□ 0.66
SHANK2-202ENST00000357171 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
SHANK2-202ENST00000357171 CPSF1Q10570 1443 aaKnown RBP19.2■□□□□ 0.66
SHANK2-202ENST00000357171 CDK12Q9NYV4 1490 aaPredicted RBP19.2■□□□□ 0.66
SHANK2-202ENST00000357171 LMOD2Q6P5Q4 547 aa19.19■□□□□ 0.66
SHANK2-202ENST00000357171 PLCH1Q4KWH8 1693 aa19.19■□□□□ 0.66
SHANK2-202ENST00000357171 USP47Q96K76 1375 aa19.19■□□□□ 0.66
SHANK2-202ENST00000357171 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
SHANK2-202ENST00000357171 MON2Q7Z3U7 1717 aa19.18■□□□□ 0.66
SHANK2-202ENST00000357171 NRKQ7Z2Y5 1582 aa19.18■□□□□ 0.66
SHANK2-202ENST00000357171 PAK3O75914 559 aaPredicted RBP19.18■□□□□ 0.66
SHANK2-202ENST00000357171 USP21Q9UK80 565 aa19.18■□□□□ 0.66
SHANK2-202ENST00000357171 ATRNO75882 1429 aa19.17■□□□□ 0.66
SHANK2-202ENST00000357171 QTRT2Q9H974 415 aaKnown RBP19.17■□□□□ 0.66
SHANK2-202ENST00000357171 CD163L1Q9NR16 1453 aa19.16■□□□□ 0.66
SHANK2-202ENST00000357171 RXRBP28702 533 aa19.16■□□□□ 0.66
SHANK2-202ENST00000357171 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
SHANK2-202ENST00000357171 PIK3C2AO00443 1686 aa19.16■□□□□ 0.66
SHANK2-202ENST00000357171 COL14A1Q05707 1796 aaKnown RBP19.16■□□□□ 0.66
SHANK2-202ENST00000357171 NRAPQ86VF7 1730 aa19.15■□□□□ 0.66
SHANK2-202ENST00000357171 USP19O94966 1318 aa19.14■□□□□ 0.65
SHANK2-202ENST00000357171 RBM6P78332 1123 aaKnown RBP19.14■□□□□ 0.65
SHANK2-202ENST00000357171 TRPC5Q9UL62 973 aaPredicted RBP19.14■□□□□ 0.65
SHANK2-202ENST00000357171 FAM83GA6ND36 823 aa19.13■□□□□ 0.65
SHANK2-202ENST00000357171 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
SHANK2-202ENST00000357171 HAP1P54257 671 aaPredicted RBP19.12■□□□□ 0.65
SHANK2-202ENST00000357171 UNC5CLQ8IV45 518 aa19.12■□□□□ 0.65
SHANK2-202ENST00000357171 USP54Q70EL1 1684 aa19.11■□□□□ 0.65
SHANK2-202ENST00000357171 EP400Q96L91 3159 aa19.11■□□□□ 0.65
SHANK2-202ENST00000357171 SLIT3O75094 1523 aa19.11■□□□□ 0.65
SHANK2-202ENST00000357171 NINLQ9Y2I6 1382 aa19.11■□□□□ 0.65
SHANK2-202ENST00000357171 TTC21BQ7Z4L5 1316 aa19.09■□□□□ 0.65
SHANK2-202ENST00000357171 NLRP13Q86W25 1043 aa19.09■□□□□ 0.65
SHANK2-202ENST00000357171 GLI3P10071 1580 aa19.09■□□□□ 0.65
SHANK2-202ENST00000357171 KTN1Q86UP2 1357 aaKnown RBP19.09■□□□□ 0.65
SHANK2-202ENST00000357171 TTC21AQ8NDW8 1320 aa19.09■□□□□ 0.65
SHANK2-202ENST00000357171 PLEKHG5O94827 1062 aa19.08■□□□□ 0.65
SHANK2-202ENST00000357171 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.65
SHANK2-202ENST00000357171 SLC12A5Q9H2X9 1139 aa19.08■□□□□ 0.65
SHANK2-202ENST00000357171 RGS12O14924 1447 aa19.08■□□□□ 0.65
SHANK2-202ENST00000357171 CPDO75976 1380 aa19.08■□□□□ 0.64
SHANK2-202ENST00000357171 GJD4Q96KN9 370 aaPredicted RBP19.07■□□□□ 0.64
SHANK2-202ENST00000357171 LMO7Q8WWI1 1683 aa19.07■□□□□ 0.64
SHANK2-202ENST00000357171 KIAA0232Q92628 1395 aa19.07■□□□□ 0.64
SHANK2-202ENST00000357171 TMF1P82094 1093 aa19.06■□□□□ 0.64
SHANK2-202ENST00000357171 VPS72Q15906 364 aa19.06■□□□□ 0.64
SHANK2-202ENST00000357171 GCP02774 474 aa19.06■□□□□ 0.64
SHANK2-202ENST00000357171 A0A1W2PP64 1363 aa19.05■□□□□ 0.64
SHANK2-202ENST00000357171 NLRP6P59044 892 aa19.05■□□□□ 0.64
SHANK2-202ENST00000357171 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
SHANK2-202ENST00000357171 EDC4Q6P2E9 1401 aaKnown RBP19.04■□□□□ 0.64
SHANK2-202ENST00000357171 PRDM11Q9NQV5 511 aa19.04■□□□□ 0.64
SHANK2-202ENST00000357171 BTG4Q9NY30 223 aa19.04■□□□□ 0.64
SHANK2-202ENST00000357171 TERF2IPQ9NYB0 399 aa19.04■□□□□ 0.64
SHANK2-202ENST00000357171 USP31Q70CQ4 1352 aa19.04■□□□□ 0.64
SHANK2-202ENST00000357171 MYOM1P52179 1685 aa19.04■□□□□ 0.64
SHANK2-202ENST00000357171 COL18A1P39060 1754 aa19.04■□□□□ 0.64
SHANK2-202ENST00000357171 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
SHANK2-202ENST00000357171 ONECUT3O60422 494 aaPredicted RBP19.02■□□□□ 0.64
SHANK2-202ENST00000357171 ZC3H6P61129 1189 aaKnown RBP19.02■□□□□ 0.64
SHANK2-202ENST00000357171 CDCA8Q53HL2 280 aa19.02■□□□□ 0.64
SHANK2-202ENST00000357171 CAMTA1Q9Y6Y1 1673 aa19.02■□□□□ 0.63
SHANK2-202ENST00000357171 NFAT5O94916 1531 aa19.01■□□□□ 0.63
SHANK2-202ENST00000357171 ANKRD36BQ8N2N9 1353 aa19■□□□□ 0.63
SHANK2-202ENST00000357171 BRWD3Q6RI45 1802 aa19■□□□□ 0.63
SHANK2-202ENST00000357171 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHANK2-202ENST00000357171 CHRNA2Q15822 529 aa18.99■□□□□ 0.63
SHANK2-202ENST00000357171 AATKQ6ZMQ8 1374 aa18.98■□□□□ 0.63
SHANK2-202ENST00000357171 OVOS2A0A0J9YW53 1432 aa18.97■□□□□ 0.63
SHANK2-202ENST00000357171 OVOS2Q6IE36 1432 aa18.97■□□□□ 0.63
SHANK2-202ENST00000357171 KCNH5Q8NCM2 988 aa18.97■□□□□ 0.63
SHANK2-202ENST00000357171 SPATA31A5Q5VU36 1347 aa18.97■□□□□ 0.63
SHANK2-202ENST00000357171 SPATA31A7Q8IWB4 1347 aa18.97■□□□□ 0.63
SHANK2-202ENST00000357171 RGPD5Q99666 1765 aa18.96■□□□□ 0.63
SHANK2-202ENST00000357171 ABCC6O95255 1503 aa18.96■□□□□ 0.63
SHANK2-202ENST00000357171 HSPA5P11021 654 aaKnown RBP18.96■□□□□ 0.63
SHANK2-202ENST00000357171 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
SHANK2-202ENST00000357171 NME9Q86XW9 330 aa18.96■□□□□ 0.63
SHANK2-202ENST00000357171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.96■□□□□ 0.63
SHANK2-202ENST00000357171 ZRANB1Q9UGI0 708 aa18.95■□□□□ 0.62
SHANK2-202ENST00000357171 LTN1O94822 1766 aa18.95■□□□□ 0.62
SHANK2-202ENST00000357171 COL5A2P05997 1499 aaPredicted RBP18.95■□□□□ 0.62
SHANK2-202ENST00000357171 THSD7AQ9UPZ6 1657 aa18.94■□□□□ 0.62
SHANK2-202ENST00000357171 SPATA31A1Q5TZJ5 1347 aa18.93■□□□□ 0.62
SHANK2-202ENST00000357171 UPF1Q92900 1129 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHANK2-202ENST00000357171 KIF20BQ96Q89 1820 aa18.92■□□□□ 0.62
SHANK2-202ENST00000357171 SEPT12Q8IYM1 358 aa18.91■□□□□ 0.62
SHANK2-202ENST00000357171 CCDC9Q9Y3X0 531 aaKnown RBP18.91■□□□□ 0.62
SHANK2-202ENST00000357171 AXIN2Q9Y2T1 843 aa18.9■□□□□ 0.62
SHANK2-202ENST00000357171 LARP1Q6PKG0 1096 aaKnown RBP18.89■□□□□ 0.61
SHANK2-202ENST00000357171 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms