RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 NWD2Q9ULI1 1742 aa28.83■■■□□ 2.21
CHRD-203ENST00000356534 ACEP12821 1306 aa28.83■■■□□ 2.21
CHRD-203ENST00000356534 SLC24A1O60721 1099 aa28.82■■■□□ 2.2
CHRD-203ENST00000356534 PLCH1Q4KWH8 1693 aa28.82■■■□□ 2.2
CHRD-203ENST00000356534 PHRF1Q9P1Y6 1649 aaKnown RBP28.81■■■□□ 2.2
CHRD-203ENST00000356534 PAK3O75914 559 aaPredicted RBP28.79■■■□□ 2.2
CHRD-203ENST00000356534 FNBP4Q8N3X1 1017 aaPredicted RBP28.77■■■□□ 2.2
CHRD-203ENST00000356534 CDK12Q9NYV4 1490 aaPredicted RBP28.77■■■□□ 2.2
CHRD-203ENST00000356534 MON2Q7Z3U7 1717 aa28.76■■■□□ 2.19
CHRD-203ENST00000356534 COL14A1Q05707 1796 aaKnown RBP28.75■■■□□ 2.19
CHRD-203ENST00000356534 USP21Q9UK80 565 aa28.75■■■□□ 2.19
CHRD-203ENST00000356534 USP6P35125 1406 aa28.74■■■□□ 2.19
CHRD-203ENST00000356534 RXRBP28702 533 aa28.73■■■□□ 2.19
CHRD-203ENST00000356534 CABP1Q9NZU7 370 aa28.73■■■□□ 2.19
CHRD-203ENST00000356534 SLIT2O94813 1529 aa28.73■■■□□ 2.19
CHRD-203ENST00000356534 USP47Q96K76 1375 aa28.73■■■□□ 2.19
CHRD-203ENST00000356534 NRKQ7Z2Y5 1582 aa28.71■■■□□ 2.19
CHRD-203ENST00000356534 PUS7Q96PZ0 661 aaKnown RBP28.71■■■□□ 2.19
CHRD-203ENST00000356534 TRPC5Q9UL62 973 aaPredicted RBP28.71■■■□□ 2.19
CHRD-203ENST00000356534 CABLES1Q8TDN4 633 aa28.7■■■□□ 2.18
CHRD-203ENST00000356534 QTRT2Q9H974 415 aaKnown RBP28.7■■■□□ 2.18
CHRD-203ENST00000356534 ATRNO75882 1429 aa28.69■■■□□ 2.18
CHRD-203ENST00000356534 RBM6P78332 1123 aaKnown RBP28.69■■■□□ 2.18
CHRD-203ENST00000356534 ZNF692Q9BU19 519 aaPredicted RBP28.69■■■□□ 2.18
CHRD-203ENST00000356534 ST20-MTHFSA0A0A6YYL1 179 aa28.68■■■□□ 2.18
CHRD-203ENST00000356534 BCL9LQ86UU0 1499 aa28.67■■■□□ 2.18
CHRD-203ENST00000356534 NRAPQ86VF7 1730 aa28.67■■■□□ 2.18
CHRD-203ENST00000356534 PIK3C2AO00443 1686 aa28.67■■■□□ 2.18
CHRD-203ENST00000356534 NINLQ9Y2I6 1382 aa28.66■■■□□ 2.18
CHRD-203ENST00000356534 PLEKHG5O94827 1062 aa28.66■■■□□ 2.18
CHRD-203ENST00000356534 ABTB2Q8N961 1025 aa28.66■■■□□ 2.18
CHRD-203ENST00000356534 CPSF1Q10570 1443 aaKnown RBP28.64■■■□□ 2.18
CHRD-203ENST00000356534 TESK2Q96S53 571 aa28.64■■■□□ 2.18
CHRD-203ENST00000356534 NLRP13Q86W25 1043 aa28.63■■■□□ 2.17
CHRD-203ENST00000356534 UNC5CLQ8IV45 518 aa28.63■■■□□ 2.17
CHRD-203ENST00000356534 SSH2Q76I76 1423 aa28.62■■■□□ 2.17
CHRD-203ENST00000356534 USP19O94966 1318 aa28.61■■■□□ 2.17
CHRD-203ENST00000356534 TTC21AQ8NDW8 1320 aa28.61■■■□□ 2.17
CHRD-203ENST00000356534 KTN1Q86UP2 1357 aaKnown RBP28.61■■■□□ 2.17
CHRD-203ENST00000356534 USP54Q70EL1 1684 aa28.61■■■□□ 2.17
CHRD-203ENST00000356534 TMF1P82094 1093 aa28.59■■■□□ 2.17
CHRD-203ENST00000356534 RGS12O14924 1447 aa28.59■■■□□ 2.17
CHRD-203ENST00000356534 SLIT3O75094 1523 aa28.59■■■□□ 2.17
CHRD-203ENST00000356534 HDGFL2Q7Z4V5 671 aaPredicted RBP28.58■■■□□ 2.17
CHRD-203ENST00000356534 CDCA8Q53HL2 280 aa28.57■■■□□ 2.16
CHRD-203ENST00000356534 NUTM2GQ5VZR2 741 aa28.57■■■□□ 2.16
CHRD-203ENST00000356534 TMC1Q8TDI8 760 aa28.57■■■□□ 2.16
CHRD-203ENST00000356534 PRDM11Q9NQV5 511 aa28.57■■■□□ 2.16
CHRD-203ENST00000356534 GLI3P10071 1580 aa28.56■■■□□ 2.16
CHRD-203ENST00000356534 TERF2IPQ9NYB0 399 aa28.56■■■□□ 2.16
CHRD-203ENST00000356534 CD163L1Q9NR16 1453 aa28.55■■■□□ 2.16
CHRD-203ENST00000356534 TTC21BQ7Z4L5 1316 aa28.55■■■□□ 2.16
CHRD-203ENST00000356534 CPDO75976 1380 aa28.54■■■□□ 2.16
CHRD-203ENST00000356534 KIAA0232Q92628 1395 aa28.54■■■□□ 2.16
CHRD-203ENST00000356534 FAM83GA6ND36 823 aa28.54■■■□□ 2.16
CHRD-203ENST00000356534 GJD4Q96KN9 370 aaPredicted RBP28.54■■■□□ 2.16
CHRD-203ENST00000356534 EDC4Q6P2E9 1401 aaKnown RBP28.53■■■□□ 2.16
CHRD-203ENST00000356534 NLRP6P59044 892 aa28.53■■■□□ 2.16
CHRD-203ENST00000356534 LMO7Q8WWI1 1683 aa28.52■■■□□ 2.16
CHRD-203ENST00000356534 VPS72Q15906 364 aa28.52■■■□□ 2.16
CHRD-203ENST00000356534 BTG4Q9NY30 223 aa28.51■■■□□ 2.15
CHRD-203ENST00000356534 A0A1W2PP64 1363 aa28.5■■■□□ 2.15
CHRD-203ENST00000356534 MYOM1P52179 1685 aa28.49■■■□□ 2.15
CHRD-203ENST00000356534 SLC12A5Q9H2X9 1139 aa28.49■■■□□ 2.15
CHRD-203ENST00000356534 GCP02774 474 aa28.48■■■□□ 2.15
CHRD-203ENST00000356534 ZC3H6P61129 1189 aaKnown RBP28.48■■■□□ 2.15
CHRD-203ENST00000356534 BRWD3Q6RI45 1802 aa28.48■■■□□ 2.15
CHRD-203ENST00000356534 EIF4G2P78344 907 aaKnown RBP eCLIP28.46■■■□□ 2.15
CHRD-203ENST00000356534 KCNH5Q8NCM2 988 aa28.46■■■□□ 2.15
CHRD-203ENST00000356534 CCDC9Q9Y3X0 531 aaKnown RBP28.46■■■□□ 2.15
CHRD-203ENST00000356534 ANKRD36BQ8N2N9 1353 aa28.46■■■□□ 2.15
CHRD-203ENST00000356534 USP31Q70CQ4 1352 aa28.44■■■□□ 2.14
CHRD-203ENST00000356534 LTN1O94822 1766 aa28.44■■■□□ 2.14
CHRD-203ENST00000356534 ABCC6O95255 1503 aa28.43■■■□□ 2.14
CHRD-203ENST00000356534 KIF20BQ96Q89 1820 aa28.43■■■□□ 2.14
CHRD-203ENST00000356534 COL18A1P39060 1754 aa28.42■■■□□ 2.14
CHRD-203ENST00000356534 CHRNA2Q15822 529 aa28.42■■■□□ 2.14
CHRD-203ENST00000356534 RGPD5Q99666 1765 aa28.42■■■□□ 2.14
CHRD-203ENST00000356534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.41■■■□□ 2.14
CHRD-203ENST00000356534 NFAT5O94916 1531 aa28.41■■■□□ 2.14
CHRD-203ENST00000356534 CAMTA1Q9Y6Y1 1673 aa28.41■■■□□ 2.14
CHRD-203ENST00000356534 AATKQ6ZMQ8 1374 aa28.38■■■□□ 2.13
CHRD-203ENST00000356534 SPATA31A5Q5VU36 1347 aa28.37■■■□□ 2.13
CHRD-203ENST00000356534 SPATA31A7Q8IWB4 1347 aa28.37■■■□□ 2.13
CHRD-203ENST00000356534 THSD7AQ9UPZ6 1657 aa28.36■■■□□ 2.13
CHRD-203ENST00000356534 COL5A2P05997 1499 aaPredicted RBP28.36■■■□□ 2.13
CHRD-203ENST00000356534 OVOS2A0A0J9YW53 1432 aa28.35■■■□□ 2.13
CHRD-203ENST00000356534 OVOS2Q6IE36 1432 aa28.35■■■□□ 2.13
CHRD-203ENST00000356534 EVA1CP58658 441 aa28.35■■■□□ 2.13
CHRD-203ENST00000356534 HSPA5P11021 654 aaKnown RBP28.34■■■□□ 2.13
CHRD-203ENST00000356534 NME9Q86XW9 330 aa28.34■■■□□ 2.13
CHRD-203ENST00000356534 STRN4Q9NRL3 753 aa28.34■■■□□ 2.13
CHRD-203ENST00000356534 ONECUT3O60422 494 aaPredicted RBP28.33■■■□□ 2.13
CHRD-203ENST00000356534 WNK3Q9BYP7 1800 aa28.32■■■□□ 2.12
CHRD-203ENST00000356534 ZBTB7CA1YPR0 619 aa28.32■■■□□ 2.12
CHRD-203ENST00000356534 ARHGEF25Q86VW2 580 aa28.31■■■□□ 2.12
CHRD-203ENST00000356534 SEPT12Q8IYM1 358 aa28.31■■■□□ 2.12
CHRD-203ENST00000356534 SPATA31A1Q5TZJ5 1347 aa28.31■■■□□ 2.12
CHRD-203ENST00000356534 A0A0G2JS52 829 aa28.3■■■□□ 2.12
CHRD-203ENST00000356534 MYT1Q01538 1121 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms